KEGG   PATHWAY: ptrp01100
Entry
ptrp01100                   Pathway                                
Name
Metabolic pathways - Polynucleobacter tropicus
Class
Pathway map
ptrp01100  Metabolic pathways
ptrp01100

Module
ptrp_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ptrp01100]
ptrp_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ptrp01100]
ptrp_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ptrp01100]
ptrp_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ptrp01100]
ptrp_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ptrp01100]
ptrp_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ptrp01100]
ptrp_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ptrp01100]
ptrp_M00012  Glyoxylate cycle [PATH:ptrp01100]
ptrp_M00015  Proline biosynthesis, glutamate => proline [PATH:ptrp01100]
ptrp_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ptrp01100]
ptrp_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ptrp01100]
ptrp_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ptrp01100]
ptrp_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ptrp01100]
ptrp_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ptrp01100]
ptrp_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ptrp01100]
ptrp_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ptrp01100]
ptrp_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ptrp01100]
ptrp_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ptrp01100]
ptrp_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ptrp01100]
ptrp_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ptrp01100]
ptrp_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ptrp01100]
ptrp_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ptrp01100]
ptrp_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ptrp01100]
ptrp_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ptrp01100]
ptrp_M00063  CMP-KDO biosynthesis [PATH:ptrp01100]
ptrp_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ptrp01100]
ptrp_M00082  Fatty acid biosynthesis, initiation [PATH:ptrp01100]
ptrp_M00083  Fatty acid biosynthesis, elongation [PATH:ptrp01100]
ptrp_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ptrp01100]
ptrp_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ptrp01100]
ptrp_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ptrp01100]
ptrp_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ptrp01100]
ptrp_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ptrp01100]
ptrp_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ptrp01100]
ptrp_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ptrp01100]
ptrp_M00149  Succinate dehydrogenase, prokaryotes [PATH:ptrp01100]
ptrp_M00151  Cytochrome bc1 complex respiratory unit [PATH:ptrp01100]
ptrp_M00155  Cytochrome c oxidase, prokaryotes [PATH:ptrp01100]
ptrp_M00156  Cytochrome c oxidase, cbb3-type [PATH:ptrp01100]
ptrp_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ptrp01100]
ptrp_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ptrp01100]
ptrp_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ptrp01100]
ptrp_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ptrp01100]
ptrp_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ptrp01100]
ptrp_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:ptrp01100]
ptrp_M00793  dTDP-L-rhamnose biosynthesis [PATH:ptrp01100]
ptrp_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ptrp01100]
ptrp_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ptrp01100]
ptrp_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ptrp01100]
ptrp_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ptrp01100]
Organism
Polynucleobacter tropicus [GN:ptrp]
Related
pathway
ptrp00010  Glycolysis / Gluconeogenesis
ptrp00020  Citrate cycle (TCA cycle)
ptrp00030  Pentose phosphate pathway
ptrp00040  Pentose and glucuronate interconversions
ptrp00051  Fructose and mannose metabolism
ptrp00052  Galactose metabolism
ptrp00053  Ascorbate and aldarate metabolism
ptrp00061  Fatty acid biosynthesis
ptrp00071  Fatty acid degradation
ptrp00121  Secondary bile acid biosynthesis
ptrp00130  Ubiquinone and other terpenoid-quinone biosynthesis
ptrp00190  Oxidative phosphorylation
ptrp00220  Arginine biosynthesis
ptrp00230  Purine metabolism
ptrp00240  Pyrimidine metabolism
ptrp00250  Alanine, aspartate and glutamate metabolism
ptrp00260  Glycine, serine and threonine metabolism
ptrp00261  Monobactam biosynthesis
ptrp00270  Cysteine and methionine metabolism
ptrp00280  Valine, leucine and isoleucine degradation
ptrp00290  Valine, leucine and isoleucine biosynthesis
ptrp00300  Lysine biosynthesis
ptrp00310  Lysine degradation
ptrp00330  Arginine and proline metabolism
ptrp00332  Carbapenem biosynthesis
ptrp00340  Histidine metabolism
ptrp00350  Tyrosine metabolism
ptrp00360  Phenylalanine metabolism
ptrp00361  Chlorocyclohexane and chlorobenzene degradation
ptrp00362  Benzoate degradation
ptrp00364  Fluorobenzoate degradation
ptrp00380  Tryptophan metabolism
ptrp00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ptrp00401  Novobiocin biosynthesis
ptrp00410  beta-Alanine metabolism
ptrp00430  Taurine and hypotaurine metabolism
ptrp00450  Selenocompound metabolism
ptrp00460  Cyanoamino acid metabolism
ptrp00470  D-Amino acid metabolism
ptrp00480  Glutathione metabolism
ptrp00500  Starch and sucrose metabolism
ptrp00520  Amino sugar and nucleotide sugar metabolism
ptrp00521  Streptomycin biosynthesis
ptrp00523  Polyketide sugar unit biosynthesis
ptrp00525  Acarbose and validamycin biosynthesis
ptrp00540  Lipopolysaccharide biosynthesis
ptrp00541  O-Antigen nucleotide sugar biosynthesis
ptrp00543  Exopolysaccharide biosynthesis
ptrp00550  Peptidoglycan biosynthesis
ptrp00552  Teichoic acid biosynthesis
ptrp00561  Glycerolipid metabolism
ptrp00562  Inositol phosphate metabolism
ptrp00564  Glycerophospholipid metabolism
ptrp00620  Pyruvate metabolism
ptrp00623  Toluene degradation
ptrp00625  Chloroalkane and chloroalkene degradation
ptrp00627  Aminobenzoate degradation
ptrp00630  Glyoxylate and dicarboxylate metabolism
ptrp00640  Propanoate metabolism
ptrp00650  Butanoate metabolism
ptrp00660  C5-Branched dibasic acid metabolism
ptrp00670  One carbon pool by folate
ptrp00680  Methane metabolism
ptrp00710  Carbon fixation by Calvin cycle
ptrp00720  Other carbon fixation pathways
ptrp00730  Thiamine metabolism
ptrp00740  Riboflavin metabolism
ptrp00750  Vitamin B6 metabolism
ptrp00760  Nicotinate and nicotinamide metabolism
ptrp00770  Pantothenate and CoA biosynthesis
ptrp00780  Biotin metabolism
ptrp00785  Lipoic acid metabolism
ptrp00790  Folate biosynthesis
ptrp00860  Porphyrin metabolism
ptrp00900  Terpenoid backbone biosynthesis
ptrp00906  Carotenoid biosynthesis
ptrp00907  Pinene, camphor and geraniol degradation
ptrp00910  Nitrogen metabolism
ptrp00920  Sulfur metabolism
ptrp00930  Caprolactam degradation
ptrp00999  Biosynthesis of various plant secondary metabolites
ptrp01040  Biosynthesis of unsaturated fatty acids
ptrp01055  Biosynthesis of vancomycin group antibiotics
KO pathway
ko01100   
LinkDB

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