PATHWAY: ptrt01100 Help Entry ptrt01100                   Pathway                                 Name Metabolic pathways - Pseudomonas tritici Class BRITE hierarchy Pathway map ptrt01100   Metabolic pathways Module ptrt_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ptrt01100] ptrt_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ptrt01100] ptrt_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ptrt01100] ptrt_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ptrt01100] ptrt_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ptrt01100] ptrt_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ptrt01100] ptrt_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ptrt01100] ptrt_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:ptrt01100] ptrt_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ptrt01100] ptrt_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ptrt01100] ptrt_M00015   Proline biosynthesis, glutamate => proline [PATH:ptrt01100] ptrt_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ptrt01100] ptrt_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ptrt01100] ptrt_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ptrt01100] ptrt_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:ptrt01100] ptrt_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ptrt01100] ptrt_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ptrt01100] ptrt_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:ptrt01100] ptrt_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ptrt01100] ptrt_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ptrt01100] ptrt_M00035   Methionine degradation [PATH:ptrt01100] ptrt_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:ptrt01100] ptrt_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:ptrt01100] ptrt_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:ptrt01100] ptrt_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ptrt01100] ptrt_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ptrt01100] ptrt_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ptrt01100] ptrt_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ptrt01100] ptrt_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ptrt01100] ptrt_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ptrt01100] ptrt_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ptrt01100] ptrt_M00063   CMP-KDO biosynthesis [PATH:ptrt01100] ptrt_M00082   Fatty acid biosynthesis, initiation [PATH:ptrt01100] ptrt_M00083   Fatty acid biosynthesis, elongation [PATH:ptrt01100] ptrt_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:ptrt01100] ptrt_M00087   beta-Oxidation [PATH:ptrt01100] ptrt_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ptrt01100] ptrt_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ptrt01100] ptrt_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ptrt01100] ptrt_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ptrt01100] ptrt_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:ptrt01100] ptrt_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ptrt01100] ptrt_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ptrt01100] ptrt_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ptrt01100] ptrt_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ptrt01100] ptrt_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ptrt01100] ptrt_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ptrt01100] ptrt_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:ptrt01100] ptrt_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:ptrt01100] ptrt_M00149   Succinate dehydrogenase, prokaryotes [PATH:ptrt01100] ptrt_M00151   Cytochrome bc1 complex respiratory unit [PATH:ptrt01100] ptrt_M00155   Cytochrome c oxidase, prokaryotes [PATH:ptrt01100] ptrt_M00156   Cytochrome c oxidase, cbb3-type [PATH:ptrt01100] ptrt_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ptrt01100] ptrt_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:ptrt01100] ptrt_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ptrt01100] ptrt_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:ptrt01100] ptrt_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:ptrt01100] ptrt_M00417   Cytochrome o ubiquinol oxidase [PATH:ptrt01100] ptrt_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ptrt01100] ptrt_M00533   Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:ptrt01100] ptrt_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ptrt01100] ptrt_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:ptrt01100] ptrt_M00555   Betaine biosynthesis, choline => betaine [PATH:ptrt01100] ptrt_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:ptrt01100] ptrt_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ptrt01100] ptrt_M00621   Glycine cleavage system [PATH:ptrt01100] ptrt_M00637   Anthranilate degradation, anthranilate => catechol [PATH:ptrt01100] ptrt_M00793   dTDP-L-rhamnose biosynthesis [PATH:ptrt01100] ptrt_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ptrt01100] ptrt_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ptrt01100] ptrt_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:ptrt01100] ptrt_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ptrt01100] ptrt_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ptrt01100] ptrt_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ptrt01100] ptrt_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ptrt01100] ptrt_M00947   D-Arginine racemization, D-arginine => L-arginine [PATH:ptrt01100] ptrt_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:ptrt01100] ptrt_M00957   Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:ptrt01100] ptrt_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:ptrt01100] ptrt_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:ptrt01100] ptrt_M00970   Proline degradation, proline => glutamate [PATH:ptrt01100] ptrt_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:ptrt01100] Organism Pseudomonas tritici [GN:ptrt] Related pathway ptrt00010   Glycolysis / Gluconeogenesis ptrt00020   Citrate cycle (TCA cycle) ptrt00030   Pentose phosphate pathway ptrt00040   Pentose and glucuronate interconversions ptrt00051   Fructose and mannose metabolism ptrt00052   Galactose metabolism ptrt00053   Ascorbate and aldarate metabolism ptrt00061   Fatty acid biosynthesis ptrt00071   Fatty acid degradation ptrt00130   Ubiquinone and other terpenoid-quinone biosynthesis ptrt00190   Oxidative phosphorylation ptrt00220   Arginine biosynthesis ptrt00230   Purine metabolism ptrt00240   Pyrimidine metabolism ptrt00250   Alanine, aspartate and glutamate metabolism ptrt00260   Glycine, serine and threonine metabolism ptrt00261   Monobactam biosynthesis ptrt00270   Cysteine and methionine metabolism ptrt00280   Valine, leucine and isoleucine degradation ptrt00290   Valine, leucine and isoleucine biosynthesis ptrt00300   Lysine biosynthesis ptrt00310   Lysine degradation ptrt00330   Arginine and proline metabolism ptrt00332   Carbapenem biosynthesis ptrt00340   Histidine metabolism ptrt00350   Tyrosine metabolism ptrt00360   Phenylalanine metabolism ptrt00361   Chlorocyclohexane and chlorobenzene degradation ptrt00362   Benzoate degradation ptrt00364   Fluorobenzoate degradation ptrt00380   Tryptophan metabolism ptrt00400   Phenylalanine, tyrosine and tryptophan biosynthesis ptrt00401   Novobiocin biosynthesis ptrt00410   beta-Alanine metabolism ptrt00430   Taurine and hypotaurine metabolism ptrt00440   Phosphonate and phosphinate metabolism ptrt00450   Selenocompound metabolism ptrt00460   Cyanoamino acid metabolism ptrt00470   D-Amino acid metabolism ptrt00480   Glutathione metabolism ptrt00500   Starch and sucrose metabolism ptrt00520   Amino sugar and nucleotide sugar metabolism ptrt00521   Streptomycin biosynthesis ptrt00523   Polyketide sugar unit biosynthesis ptrt00525   Acarbose and validamycin biosynthesis ptrt00540   Lipopolysaccharide biosynthesis ptrt00541   O-Antigen nucleotide sugar biosynthesis ptrt00543   Exopolysaccharide biosynthesis ptrt00550   Peptidoglycan biosynthesis ptrt00552   Teichoic acid biosynthesis ptrt00561   Glycerolipid metabolism ptrt00562   Inositol phosphate metabolism ptrt00564   Glycerophospholipid metabolism ptrt00565   Ether lipid metabolism ptrt00592   alpha-Linolenic acid metabolism ptrt00620   Pyruvate metabolism ptrt00621   Dioxin degradation ptrt00622   Xylene degradation ptrt00623   Toluene degradation ptrt00625   Chloroalkane and chloroalkene degradation ptrt00626   Naphthalene degradation ptrt00627   Aminobenzoate degradation ptrt00630   Glyoxylate and dicarboxylate metabolism ptrt00633   Nitrotoluene degradation ptrt00640   Propanoate metabolism ptrt00643   Styrene degradation ptrt00650   Butanoate metabolism ptrt00660   C5-Branched dibasic acid metabolism ptrt00670   One carbon pool by folate ptrt00680   Methane metabolism ptrt00710   Carbon fixation by Calvin cycle ptrt00720   Other carbon fixation pathways ptrt00730   Thiamine metabolism ptrt00740   Riboflavin metabolism ptrt00750   Vitamin B6 metabolism ptrt00760   Nicotinate and nicotinamide metabolism ptrt00770   Pantothenate and CoA biosynthesis ptrt00780   Biotin metabolism ptrt00785   Lipoic acid metabolism ptrt00790   Folate biosynthesis ptrt00791   Atrazine degradation ptrt00860   Porphyrin metabolism ptrt00900   Terpenoid backbone biosynthesis ptrt00907   Pinene, camphor and geraniol degradation ptrt00910   Nitrogen metabolism ptrt00920   Sulfur metabolism ptrt00930   Caprolactam degradation ptrt00946   Degradation of flavonoids ptrt00997   Biosynthesis of various other secondary metabolites ptrt00999   Biosynthesis of various plant secondary metabolites ptrt01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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