KEGG   PATHWAY: pub01100
Entry
pub01100                    Pathway                                
Name
Metabolic pathways - Candidatus Pelagibacter ubique
Class
Pathway map
pub01100  Metabolic pathways
pub01100

Module
pub_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pub01100]
pub_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pub01100]
pub_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pub01100]
pub_M00015  Proline biosynthesis, glutamate => proline [PATH:pub01100]
pub_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pub01100]
pub_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pub01100]
pub_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pub01100]
pub_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pub01100]
pub_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pub01100]
pub_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pub01100]
pub_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pub01100]
pub_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pub01100]
pub_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pub01100]
pub_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pub01100]
pub_M00083  Fatty acid biosynthesis, elongation [PATH:pub01100]
pub_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pub01100]
pub_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pub01100]
pub_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pub01100]
pub_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pub01100]
pub_M00140  C1-unit interconversion, prokaryotes [PATH:pub01100]
pub_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pub01100]
pub_M00149  Succinate dehydrogenase, prokaryotes [PATH:pub01100]
pub_M00151  Cytochrome bc1 complex respiratory unit [PATH:pub01100]
pub_M00155  Cytochrome c oxidase, prokaryotes [PATH:pub01100]
pub_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pub01100]
pub_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pub01100]
pub_M00169  CAM (Crassulacean acid metabolism), light [PATH:pub01100]
pub_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pub01100]
pub_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pub01100]
pub_M00621  Glycine cleavage system [PATH:pub01100]
pub_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pub01100]
pub_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pub01100]
pub_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pub01100]
pub_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pub01100]
Organism
Candidatus Pelagibacter ubique [GN:pub]
Related
pathway
pub00010  Glycolysis / Gluconeogenesis
pub00020  Citrate cycle (TCA cycle)
pub00030  Pentose phosphate pathway
pub00040  Pentose and glucuronate interconversions
pub00051  Fructose and mannose metabolism
pub00052  Galactose metabolism
pub00053  Ascorbate and aldarate metabolism
pub00061  Fatty acid biosynthesis
pub00071  Fatty acid degradation
pub00130  Ubiquinone and other terpenoid-quinone biosynthesis
pub00190  Oxidative phosphorylation
pub00220  Arginine biosynthesis
pub00230  Purine metabolism
pub00240  Pyrimidine metabolism
pub00250  Alanine, aspartate and glutamate metabolism
pub00260  Glycine, serine and threonine metabolism
pub00261  Monobactam biosynthesis
pub00270  Cysteine and methionine metabolism
pub00280  Valine, leucine and isoleucine degradation
pub00290  Valine, leucine and isoleucine biosynthesis
pub00300  Lysine biosynthesis
pub00310  Lysine degradation
pub00330  Arginine and proline metabolism
pub00332  Carbapenem biosynthesis
pub00340  Histidine metabolism
pub00350  Tyrosine metabolism
pub00360  Phenylalanine metabolism
pub00362  Benzoate degradation
pub00380  Tryptophan metabolism
pub00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pub00401  Novobiocin biosynthesis
pub00410  beta-Alanine metabolism
pub00430  Taurine and hypotaurine metabolism
pub00450  Selenocompound metabolism
pub00470  D-Amino acid metabolism
pub00480  Glutathione metabolism
pub00500  Starch and sucrose metabolism
pub00520  Amino sugar and nucleotide sugar metabolism
pub00521  Streptomycin biosynthesis
pub00523  Polyketide sugar unit biosynthesis
pub00540  Lipopolysaccharide biosynthesis
pub00541  O-Antigen nucleotide sugar biosynthesis
pub00543  Exopolysaccharide biosynthesis
pub00550  Peptidoglycan biosynthesis
pub00552  Teichoic acid biosynthesis
pub00561  Glycerolipid metabolism
pub00562  Inositol phosphate metabolism
pub00564  Glycerophospholipid metabolism
pub00620  Pyruvate metabolism
pub00625  Chloroalkane and chloroalkene degradation
pub00626  Naphthalene degradation
pub00630  Glyoxylate and dicarboxylate metabolism
pub00640  Propanoate metabolism
pub00650  Butanoate metabolism
pub00660  C5-Branched dibasic acid metabolism
pub00670  One carbon pool by folate
pub00680  Methane metabolism
pub00710  Carbon fixation by Calvin cycle
pub00720  Other carbon fixation pathways
pub00730  Thiamine metabolism
pub00740  Riboflavin metabolism
pub00750  Vitamin B6 metabolism
pub00760  Nicotinate and nicotinamide metabolism
pub00770  Pantothenate and CoA biosynthesis
pub00780  Biotin metabolism
pub00785  Lipoic acid metabolism
pub00790  Folate biosynthesis
pub00860  Porphyrin metabolism
pub00900  Terpenoid backbone biosynthesis
pub00906  Carotenoid biosynthesis
pub00910  Nitrogen metabolism
pub00920  Sulfur metabolism
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system