KEGG   PATHWAY: pub01200
Entry
pub01200                    Pathway                                
Name
Carbon metabolism - Candidatus Pelagibacter ubique
Description
Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains carbon utilization pathways of glycolysis (map00010), pentose phosphate pathway (map00030), and citrate cycle (map00020), and six known carbon fixation pathways (map00710 and map00720) as well as some pathways of methane metabolism (map00680). The six carbon fixation pathways are: (1) reductive pentose phosphate cycle (Calvin cycle) in plants and cyanobacteria that perform oxygenic photosynthesis, (2) reductive citrate cycle in photosynthetic green sulfur bacteria and some chemolithoautotrophs, (3) 3-hydroxypropionate bi-cycle in photosynthetic green nonsulfur bacteria, two variants of 4-hydroxybutyrate pathways in Crenarchaeota called (4) hydroxypropionate-hydroxybutyrate cycle and (5) dicarboxylate-hydroxybutyrate cycle, and (6) reductive acetyl-CoA pathway in methanogenic bacteria.
Class
Pathway map
pub01200  Carbon metabolism
pub01200

Module
pub_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pub01200]
pub_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pub01200]
pub_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pub01200]
pub_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pub01200]
pub_M00168  CAM (Crassulacean acid metabolism), dark [PATH:pub01200]
pub_M00169  CAM (Crassulacean acid metabolism), light [PATH:pub01200]
pub_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pub01200]
pub_M00621  Glycine cleavage system [PATH:pub01200]
Organism
Candidatus Pelagibacter ubique [GN:pub]
KO pathway
ko01200   
LinkDB

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