KEGG   PATHWAY: pum01100
Entry
pum01100                    Pathway                                
Name
Metabolic pathways - Pseudomonas umsongensis
Class
Pathway map
pum01100  Metabolic pathways
pum01100

Module
pum_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pum01100]
pum_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pum01100]
pum_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pum01100]
pum_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pum01100]
pum_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pum01100]
pum_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pum01100]
pum_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pum01100]
pum_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pum01100]
pum_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pum01100]
pum_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pum01100]
pum_M00015  Proline biosynthesis, glutamate => proline [PATH:pum01100]
pum_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pum01100]
pum_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pum01100]
pum_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pum01100]
pum_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pum01100]
pum_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pum01100]
pum_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pum01100]
pum_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pum01100]
pum_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pum01100]
pum_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pum01100]
pum_M00035  Methionine degradation [PATH:pum01100]
pum_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:pum01100]
pum_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pum01100]
pum_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pum01100]
pum_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pum01100]
pum_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:pum01100]
pum_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pum01100]
pum_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pum01100]
pum_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pum01100]
pum_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pum01100]
pum_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pum01100]
pum_M00063  CMP-KDO biosynthesis [PATH:pum01100]
pum_M00082  Fatty acid biosynthesis, initiation [PATH:pum01100]
pum_M00083  Fatty acid biosynthesis, elongation [PATH:pum01100]
pum_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pum01100]
pum_M00087  beta-Oxidation [PATH:pum01100]
pum_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pum01100]
pum_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pum01100]
pum_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pum01100]
pum_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pum01100]
pum_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pum01100]
pum_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pum01100]
pum_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pum01100]
pum_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pum01100]
pum_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pum01100]
pum_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pum01100]
pum_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pum01100]
pum_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pum01100]
pum_M00149  Succinate dehydrogenase, prokaryotes [PATH:pum01100]
pum_M00151  Cytochrome bc1 complex respiratory unit [PATH:pum01100]
pum_M00155  Cytochrome c oxidase, prokaryotes [PATH:pum01100]
pum_M00156  Cytochrome c oxidase, cbb3-type [PATH:pum01100]
pum_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pum01100]
pum_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pum01100]
pum_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pum01100]
pum_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:pum01100]
pum_M00417  Cytochrome o ubiquinol oxidase [PATH:pum01100]
pum_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pum01100]
pum_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:pum01100]
pum_M00548  Benzene degradation, benzene => catechol [PATH:pum01100]
pum_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pum01100]
pum_M00551  Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:pum01100]
pum_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pum01100]
pum_M00555  Betaine biosynthesis, choline => betaine [PATH:pum01100]
pum_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:pum01100]
pum_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pum01100]
pum_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pum01100]
pum_M00621  Glycine cleavage system [PATH:pum01100]
pum_M00637  Anthranilate degradation, anthranilate => catechol [PATH:pum01100]
pum_M00793  dTDP-L-rhamnose biosynthesis [PATH:pum01100]
pum_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pum01100]
pum_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pum01100]
pum_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:pum01100]
pum_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pum01100]
pum_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pum01100]
pum_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pum01100]
pum_M00919  Ectoine degradation, ectoine => aspartate [PATH:pum01100]
pum_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pum01100]
pum_M00947  D-Arginine racemization, D-arginine => L-arginine [PATH:pum01100]
pum_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:pum01100]
pum_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pum01100]
pum_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pum01100]
pum_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pum01100]
pum_M00970  Proline degradation, proline => glutamate [PATH:pum01100]
pum_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:pum01100]
Organism
Pseudomonas umsongensis [GN:pum]
Related
pathway
pum00010  Glycolysis / Gluconeogenesis
pum00020  Citrate cycle (TCA cycle)
pum00030  Pentose phosphate pathway
pum00040  Pentose and glucuronate interconversions
pum00051  Fructose and mannose metabolism
pum00052  Galactose metabolism
pum00053  Ascorbate and aldarate metabolism
pum00061  Fatty acid biosynthesis
pum00071  Fatty acid degradation
pum00121  Secondary bile acid biosynthesis
pum00130  Ubiquinone and other terpenoid-quinone biosynthesis
pum00190  Oxidative phosphorylation
pum00220  Arginine biosynthesis
pum00230  Purine metabolism
pum00240  Pyrimidine metabolism
pum00250  Alanine, aspartate and glutamate metabolism
pum00260  Glycine, serine and threonine metabolism
pum00261  Monobactam biosynthesis
pum00270  Cysteine and methionine metabolism
pum00280  Valine, leucine and isoleucine degradation
pum00290  Valine, leucine and isoleucine biosynthesis
pum00300  Lysine biosynthesis
pum00310  Lysine degradation
pum00330  Arginine and proline metabolism
pum00332  Carbapenem biosynthesis
pum00340  Histidine metabolism
pum00350  Tyrosine metabolism
pum00360  Phenylalanine metabolism
pum00361  Chlorocyclohexane and chlorobenzene degradation
pum00362  Benzoate degradation
pum00364  Fluorobenzoate degradation
pum00380  Tryptophan metabolism
pum00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pum00401  Novobiocin biosynthesis
pum00410  beta-Alanine metabolism
pum00430  Taurine and hypotaurine metabolism
pum00440  Phosphonate and phosphinate metabolism
pum00450  Selenocompound metabolism
pum00460  Cyanoamino acid metabolism
pum00470  D-Amino acid metabolism
pum00480  Glutathione metabolism
pum00500  Starch and sucrose metabolism
pum00520  Amino sugar and nucleotide sugar metabolism
pum00521  Streptomycin biosynthesis
pum00523  Polyketide sugar unit biosynthesis
pum00525  Acarbose and validamycin biosynthesis
pum00540  Lipopolysaccharide biosynthesis
pum00541  O-Antigen nucleotide sugar biosynthesis
pum00543  Exopolysaccharide biosynthesis
pum00550  Peptidoglycan biosynthesis
pum00552  Teichoic acid biosynthesis
pum00561  Glycerolipid metabolism
pum00562  Inositol phosphate metabolism
pum00564  Glycerophospholipid metabolism
pum00565  Ether lipid metabolism
pum00592  alpha-Linolenic acid metabolism
pum00620  Pyruvate metabolism
pum00621  Dioxin degradation
pum00622  Xylene degradation
pum00623  Toluene degradation
pum00625  Chloroalkane and chloroalkene degradation
pum00626  Naphthalene degradation
pum00627  Aminobenzoate degradation
pum00630  Glyoxylate and dicarboxylate metabolism
pum00633  Nitrotoluene degradation
pum00640  Propanoate metabolism
pum00643  Styrene degradation
pum00650  Butanoate metabolism
pum00660  C5-Branched dibasic acid metabolism
pum00670  One carbon pool by folate
pum00680  Methane metabolism
pum00710  Carbon fixation by Calvin cycle
pum00720  Other carbon fixation pathways
pum00730  Thiamine metabolism
pum00740  Riboflavin metabolism
pum00750  Vitamin B6 metabolism
pum00760  Nicotinate and nicotinamide metabolism
pum00770  Pantothenate and CoA biosynthesis
pum00780  Biotin metabolism
pum00785  Lipoic acid metabolism
pum00790  Folate biosynthesis
pum00791  Atrazine degradation
pum00860  Porphyrin metabolism
pum00900  Terpenoid backbone biosynthesis
pum00903  Limonene degradation
pum00907  Pinene, camphor and geraniol degradation
pum00910  Nitrogen metabolism
pum00920  Sulfur metabolism
pum00930  Caprolactam degradation
pum00946  Degradation of flavonoids
pum00984  Steroid degradation
pum00999  Biosynthesis of various plant secondary metabolites
pum01040  Biosynthesis of unsaturated fatty acids
pum01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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