KEGG   PATHWAY: pvd01100
Entry
pvd01100                    Pathway                                
Name
Metabolic pathways - Pseudomonas viridiflava
Class
Pathway map
pvd01100  Metabolic pathways
pvd01100

Module
pvd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:pvd01100]
pvd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:pvd01100]
pvd_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:pvd01100]
pvd_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:pvd01100]
pvd_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:pvd01100]
pvd_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:pvd01100]
pvd_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:pvd01100]
pvd_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:pvd01100]
pvd_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:pvd01100]
pvd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:pvd01100]
pvd_M00015  Proline biosynthesis, glutamate => proline [PATH:pvd01100]
pvd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:pvd01100]
pvd_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:pvd01100]
pvd_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:pvd01100]
pvd_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:pvd01100]
pvd_M00021  Cysteine biosynthesis, serine => cysteine [PATH:pvd01100]
pvd_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:pvd01100]
pvd_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:pvd01100]
pvd_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:pvd01100]
pvd_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:pvd01100]
pvd_M00034  Methionine salvage pathway [PATH:pvd01100]
pvd_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:pvd01100]
pvd_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:pvd01100]
pvd_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:pvd01100]
pvd_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:pvd01100]
pvd_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:pvd01100]
pvd_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:pvd01100]
pvd_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:pvd01100]
pvd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:pvd01100]
pvd_M00063  CMP-KDO biosynthesis [PATH:pvd01100]
pvd_M00082  Fatty acid biosynthesis, initiation [PATH:pvd01100]
pvd_M00083  Fatty acid biosynthesis, elongation [PATH:pvd01100]
pvd_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:pvd01100]
pvd_M00087  beta-Oxidation [PATH:pvd01100]
pvd_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:pvd01100]
pvd_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:pvd01100]
pvd_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:pvd01100]
pvd_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:pvd01100]
pvd_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:pvd01100]
pvd_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:pvd01100]
pvd_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:pvd01100]
pvd_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:pvd01100]
pvd_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:pvd01100]
pvd_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:pvd01100]
pvd_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:pvd01100]
pvd_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:pvd01100]
pvd_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:pvd01100]
pvd_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:pvd01100]
pvd_M00149  Succinate dehydrogenase, prokaryotes [PATH:pvd01100]
pvd_M00151  Cytochrome bc1 complex respiratory unit [PATH:pvd01100]
pvd_M00155  Cytochrome c oxidase, prokaryotes [PATH:pvd01100]
pvd_M00156  Cytochrome c oxidase, cbb3-type [PATH:pvd01100]
pvd_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:pvd01100]
pvd_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:pvd01100]
pvd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:pvd01100]
pvd_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:pvd01100]
pvd_M00417  Cytochrome o ubiquinol oxidase [PATH:pvd01100]
pvd_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:pvd01100]
pvd_M00546  Purine degradation, xanthine => urea [PATH:pvd01100]
pvd_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:pvd01100]
pvd_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:pvd01100]
pvd_M00555  Betaine biosynthesis, choline => betaine [PATH:pvd01100]
pvd_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:pvd01100]
pvd_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:pvd01100]
pvd_M00621  Glycine cleavage system [PATH:pvd01100]
pvd_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:pvd01100]
pvd_M00793  dTDP-L-rhamnose biosynthesis [PATH:pvd01100]
pvd_M00844  Arginine biosynthesis, ornithine => arginine [PATH:pvd01100]
pvd_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:pvd01100]
pvd_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:pvd01100]
pvd_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:pvd01100]
pvd_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:pvd01100]
pvd_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:pvd01100]
pvd_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:pvd01100]
pvd_M00957  Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA [PATH:pvd01100]
pvd_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:pvd01100]
pvd_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:pvd01100]
pvd_M00970  Proline degradation, proline => glutamate [PATH:pvd01100]
pvd_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:pvd01100]
Organism
Pseudomonas viridiflava [GN:pvd]
Related
pathway
pvd00010  Glycolysis / Gluconeogenesis
pvd00020  Citrate cycle (TCA cycle)
pvd00030  Pentose phosphate pathway
pvd00040  Pentose and glucuronate interconversions
pvd00051  Fructose and mannose metabolism
pvd00052  Galactose metabolism
pvd00053  Ascorbate and aldarate metabolism
pvd00061  Fatty acid biosynthesis
pvd00071  Fatty acid degradation
pvd00074  Mycolic acid biosynthesis
pvd00130  Ubiquinone and other terpenoid-quinone biosynthesis
pvd00190  Oxidative phosphorylation
pvd00220  Arginine biosynthesis
pvd00230  Purine metabolism
pvd00240  Pyrimidine metabolism
pvd00250  Alanine, aspartate and glutamate metabolism
pvd00260  Glycine, serine and threonine metabolism
pvd00261  Monobactam biosynthesis
pvd00270  Cysteine and methionine metabolism
pvd00280  Valine, leucine and isoleucine degradation
pvd00290  Valine, leucine and isoleucine biosynthesis
pvd00300  Lysine biosynthesis
pvd00310  Lysine degradation
pvd00311  Penicillin and cephalosporin biosynthesis
pvd00330  Arginine and proline metabolism
pvd00332  Carbapenem biosynthesis
pvd00340  Histidine metabolism
pvd00350  Tyrosine metabolism
pvd00360  Phenylalanine metabolism
pvd00361  Chlorocyclohexane and chlorobenzene degradation
pvd00362  Benzoate degradation
pvd00364  Fluorobenzoate degradation
pvd00380  Tryptophan metabolism
pvd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
pvd00401  Novobiocin biosynthesis
pvd00410  beta-Alanine metabolism
pvd00430  Taurine and hypotaurine metabolism
pvd00440  Phosphonate and phosphinate metabolism
pvd00450  Selenocompound metabolism
pvd00460  Cyanoamino acid metabolism
pvd00470  D-Amino acid metabolism
pvd00480  Glutathione metabolism
pvd00500  Starch and sucrose metabolism
pvd00520  Amino sugar and nucleotide sugar metabolism
pvd00521  Streptomycin biosynthesis
pvd00523  Polyketide sugar unit biosynthesis
pvd00525  Acarbose and validamycin biosynthesis
pvd00540  Lipopolysaccharide biosynthesis
pvd00541  O-Antigen nucleotide sugar biosynthesis
pvd00543  Exopolysaccharide biosynthesis
pvd00550  Peptidoglycan biosynthesis
pvd00552  Teichoic acid biosynthesis
pvd00561  Glycerolipid metabolism
pvd00562  Inositol phosphate metabolism
pvd00564  Glycerophospholipid metabolism
pvd00592  alpha-Linolenic acid metabolism
pvd00620  Pyruvate metabolism
pvd00622  Xylene degradation
pvd00623  Toluene degradation
pvd00625  Chloroalkane and chloroalkene degradation
pvd00626  Naphthalene degradation
pvd00627  Aminobenzoate degradation
pvd00630  Glyoxylate and dicarboxylate metabolism
pvd00633  Nitrotoluene degradation
pvd00640  Propanoate metabolism
pvd00643  Styrene degradation
pvd00650  Butanoate metabolism
pvd00660  C5-Branched dibasic acid metabolism
pvd00670  One carbon pool by folate
pvd00680  Methane metabolism
pvd00710  Carbon fixation by Calvin cycle
pvd00720  Other carbon fixation pathways
pvd00730  Thiamine metabolism
pvd00740  Riboflavin metabolism
pvd00750  Vitamin B6 metabolism
pvd00760  Nicotinate and nicotinamide metabolism
pvd00770  Pantothenate and CoA biosynthesis
pvd00780  Biotin metabolism
pvd00785  Lipoic acid metabolism
pvd00790  Folate biosynthesis
pvd00791  Atrazine degradation
pvd00860  Porphyrin metabolism
pvd00900  Terpenoid backbone biosynthesis
pvd00903  Limonene degradation
pvd00906  Carotenoid biosynthesis
pvd00907  Pinene, camphor and geraniol degradation
pvd00910  Nitrogen metabolism
pvd00920  Sulfur metabolism
pvd00930  Caprolactam degradation
pvd00946  Degradation of flavonoids
pvd00996  Biosynthesis of various alkaloids
pvd00997  Biosynthesis of various other secondary metabolites
pvd00998  Biosynthesis of various antibiotics
pvd00999  Biosynthesis of various plant secondary metabolites
pvd01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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