PATHWAY: rbad01100 Help Entry rbad01100                   Pathway                                 Name Metabolic pathways - Rouxiella badensis Class BRITE hierarchy Pathway map rbad01100   Metabolic pathways Module rbad_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rbad01100] rbad_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rbad01100] rbad_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rbad01100] rbad_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rbad01100] rbad_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rbad01100] rbad_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rbad01100] rbad_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rbad01100] rbad_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rbad01100] rbad_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rbad01100] rbad_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rbad01100] rbad_M00012   Glyoxylate cycle [PATH:rbad01100] rbad_M00015   Proline biosynthesis, glutamate => proline [PATH:rbad01100] rbad_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rbad01100] rbad_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:rbad01100] rbad_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rbad01100] rbad_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rbad01100] rbad_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rbad01100] rbad_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rbad01100] rbad_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rbad01100] rbad_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:rbad01100] rbad_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:rbad01100] rbad_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rbad01100] rbad_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rbad01100] rbad_M00034   Methionine salvage pathway [PATH:rbad01100] rbad_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rbad01100] rbad_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rbad01100] rbad_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rbad01100] rbad_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rbad01100] rbad_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:rbad01100] rbad_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rbad01100] rbad_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rbad01100] rbad_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:rbad01100] rbad_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:rbad01100] rbad_M00063   CMP-KDO biosynthesis [PATH:rbad01100] rbad_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:rbad01100] rbad_M00082   Fatty acid biosynthesis, initiation [PATH:rbad01100] rbad_M00083   Fatty acid biosynthesis, elongation [PATH:rbad01100] rbad_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rbad01100] rbad_M00087   beta-Oxidation [PATH:rbad01100] rbad_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rbad01100] rbad_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:rbad01100] rbad_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rbad01100] rbad_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:rbad01100] rbad_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:rbad01100] rbad_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:rbad01100] rbad_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rbad01100] rbad_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:rbad01100] rbad_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:rbad01100] rbad_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:rbad01100] rbad_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:rbad01100] rbad_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:rbad01100] rbad_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:rbad01100] rbad_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:rbad01100] rbad_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rbad01100] rbad_M00149   Succinate dehydrogenase, prokaryotes [PATH:rbad01100] rbad_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rbad01100] rbad_M00168   CAM (Crassulacean acid metabolism), dark [PATH:rbad01100] rbad_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:rbad01100] rbad_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rbad01100] rbad_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:rbad01100] rbad_M00417   Cytochrome o ubiquinol oxidase [PATH:rbad01100] rbad_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rbad01100] rbad_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:rbad01100] rbad_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rbad01100] rbad_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:rbad01100] rbad_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:rbad01100] rbad_M00555   Betaine biosynthesis, choline => betaine [PATH:rbad01100] rbad_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:rbad01100] rbad_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rbad01100] rbad_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rbad01100] rbad_M00621   Glycine cleavage system [PATH:rbad01100] rbad_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:rbad01100] rbad_M00793   dTDP-L-rhamnose biosynthesis [PATH:rbad01100] rbad_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rbad01100] rbad_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:rbad01100] rbad_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rbad01100] rbad_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:rbad01100] rbad_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:rbad01100] rbad_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rbad01100] rbad_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rbad01100] rbad_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:rbad01100] rbad_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rbad01100] rbad_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rbad01100] rbad_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:rbad01100] rbad_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rbad01100] rbad_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rbad01100] rbad_M00970   Proline degradation, proline => glutamate [PATH:rbad01100] Organism Rouxiella badensis [GN:rbad] Related pathway rbad00010   Glycolysis / Gluconeogenesis rbad00020   Citrate cycle (TCA cycle) rbad00030   Pentose phosphate pathway rbad00040   Pentose and glucuronate interconversions rbad00051   Fructose and mannose metabolism rbad00052   Galactose metabolism rbad00053   Ascorbate and aldarate metabolism rbad00061   Fatty acid biosynthesis rbad00071   Fatty acid degradation rbad00130   Ubiquinone and other terpenoid-quinone biosynthesis rbad00190   Oxidative phosphorylation rbad00220   Arginine biosynthesis rbad00230   Purine metabolism rbad00240   Pyrimidine metabolism rbad00250   Alanine, aspartate and glutamate metabolism rbad00260   Glycine, serine and threonine metabolism rbad00261   Monobactam biosynthesis rbad00270   Cysteine and methionine metabolism rbad00280   Valine, leucine and isoleucine degradation rbad00290   Valine, leucine and isoleucine biosynthesis rbad00300   Lysine biosynthesis rbad00310   Lysine degradation rbad00330   Arginine and proline metabolism rbad00332   Carbapenem biosynthesis rbad00340   Histidine metabolism rbad00350   Tyrosine metabolism rbad00360   Phenylalanine metabolism rbad00361   Chlorocyclohexane and chlorobenzene degradation rbad00362   Benzoate degradation rbad00364   Fluorobenzoate degradation rbad00380   Tryptophan metabolism rbad00400   Phenylalanine, tyrosine and tryptophan biosynthesis rbad00401   Novobiocin biosynthesis rbad00410   beta-Alanine metabolism rbad00430   Taurine and hypotaurine metabolism rbad00440   Phosphonate and phosphinate metabolism rbad00450   Selenocompound metabolism rbad00460   Cyanoamino acid metabolism rbad00470   D-Amino acid metabolism rbad00480   Glutathione metabolism rbad00500   Starch and sucrose metabolism rbad00511   Other glycan degradation rbad00520   Amino sugar and nucleotide sugar metabolism rbad00521   Streptomycin biosynthesis rbad00523   Polyketide sugar unit biosynthesis rbad00525   Acarbose and validamycin biosynthesis rbad00540   Lipopolysaccharide biosynthesis rbad00541   O-Antigen nucleotide sugar biosynthesis rbad00542   O-Antigen repeat unit biosynthesis rbad00543   Exopolysaccharide biosynthesis rbad00550   Peptidoglycan biosynthesis rbad00552   Teichoic acid biosynthesis rbad00561   Glycerolipid metabolism rbad00562   Inositol phosphate metabolism rbad00564   Glycerophospholipid metabolism rbad00565   Ether lipid metabolism rbad00592   alpha-Linolenic acid metabolism rbad00600   Sphingolipid metabolism rbad00620   Pyruvate metabolism rbad00622   Xylene degradation rbad00623   Toluene degradation rbad00624   Polycyclic aromatic hydrocarbon degradation rbad00625   Chloroalkane and chloroalkene degradation rbad00626   Naphthalene degradation rbad00627   Aminobenzoate degradation rbad00630   Glyoxylate and dicarboxylate metabolism rbad00633   Nitrotoluene degradation rbad00640   Propanoate metabolism rbad00643   Styrene degradation rbad00650   Butanoate metabolism rbad00660   C5-Branched dibasic acid metabolism rbad00670   One carbon pool by folate rbad00680   Methane metabolism rbad00710   Carbon fixation by Calvin cycle rbad00720   Other carbon fixation pathways rbad00730   Thiamine metabolism rbad00740   Riboflavin metabolism rbad00750   Vitamin B6 metabolism rbad00760   Nicotinate and nicotinamide metabolism rbad00770   Pantothenate and CoA biosynthesis rbad00780   Biotin metabolism rbad00785   Lipoic acid metabolism rbad00790   Folate biosynthesis rbad00791   Atrazine degradation rbad00860   Porphyrin metabolism rbad00900   Terpenoid backbone biosynthesis rbad00907   Pinene, camphor and geraniol degradation rbad00910   Nitrogen metabolism rbad00920   Sulfur metabolism rbad00930   Caprolactam degradation rbad00946   Degradation of flavonoids rbad00999   Biosynthesis of various plant secondary metabolites rbad01040   Biosynthesis of unsaturated fatty acids rbad01053   Biosynthesis of siderophore group nonribosomal peptides rbad01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

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