KEGG   PATHWAY: rbk01100
Entry
rbk01100                    Pathway                                
Name
Metabolic pathways - Rhodopseudomonas boonkerdii
Class
Pathway map
rbk01100  Metabolic pathways
rbk01100

Module
rbk_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rbk01100]
rbk_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rbk01100]
rbk_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rbk01100]
rbk_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rbk01100]
rbk_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rbk01100]
rbk_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rbk01100]
rbk_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:rbk01100]
rbk_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rbk01100]
rbk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rbk01100]
rbk_M00012  Glyoxylate cycle [PATH:rbk01100]
rbk_M00015  Proline biosynthesis, glutamate => proline [PATH:rbk01100]
rbk_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rbk01100]
rbk_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rbk01100]
rbk_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rbk01100]
rbk_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:rbk01100]
rbk_M00021  Cysteine biosynthesis, serine => cysteine [PATH:rbk01100]
rbk_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rbk01100]
rbk_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:rbk01100]
rbk_M00026  Histidine biosynthesis, PRPP => histidine [PATH:rbk01100]
rbk_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:rbk01100]
rbk_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rbk01100]
rbk_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rbk01100]
rbk_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rbk01100]
rbk_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rbk01100]
rbk_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rbk01100]
rbk_M00082  Fatty acid biosynthesis, initiation [PATH:rbk01100]
rbk_M00083  Fatty acid biosynthesis, elongation [PATH:rbk01100]
rbk_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:rbk01100]
rbk_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:rbk01100]
rbk_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rbk01100]
rbk_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:rbk01100]
rbk_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:rbk01100]
rbk_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:rbk01100]
rbk_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:rbk01100]
rbk_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:rbk01100]
rbk_M00149  Succinate dehydrogenase, prokaryotes [PATH:rbk01100]
rbk_M00151  Cytochrome bc1 complex respiratory unit [PATH:rbk01100]
rbk_M00155  Cytochrome c oxidase, prokaryotes [PATH:rbk01100]
rbk_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:rbk01100]
rbk_M00168  CAM (Crassulacean acid metabolism), dark [PATH:rbk01100]
rbk_M00169  CAM (Crassulacean acid metabolism), light [PATH:rbk01100]
rbk_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:rbk01100]
rbk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rbk01100]
rbk_M00417  Cytochrome o ubiquinol oxidase [PATH:rbk01100]
rbk_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rbk01100]
rbk_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:rbk01100]
rbk_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rbk01100]
rbk_M00621  Glycine cleavage system [PATH:rbk01100]
rbk_M00622  Nicotinate degradation, nicotinate => fumarate [PATH:rbk01100]
rbk_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rbk01100]
rbk_M00793  dTDP-L-rhamnose biosynthesis [PATH:rbk01100]
rbk_M00844  Arginine biosynthesis, ornithine => arginine [PATH:rbk01100]
rbk_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rbk01100]
rbk_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rbk01100]
rbk_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rbk01100]
rbk_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:rbk01100]
rbk_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:rbk01100]
rbk_M00970  Proline degradation, proline => glutamate [PATH:rbk01100]
Organism
Rhodopseudomonas boonkerdii [GN:rbk]
Related
pathway
rbk00010  Glycolysis / Gluconeogenesis
rbk00020  Citrate cycle (TCA cycle)
rbk00030  Pentose phosphate pathway
rbk00040  Pentose and glucuronate interconversions
rbk00051  Fructose and mannose metabolism
rbk00052  Galactose metabolism
rbk00053  Ascorbate and aldarate metabolism
rbk00061  Fatty acid biosynthesis
rbk00071  Fatty acid degradation
rbk00130  Ubiquinone and other terpenoid-quinone biosynthesis
rbk00190  Oxidative phosphorylation
rbk00220  Arginine biosynthesis
rbk00230  Purine metabolism
rbk00240  Pyrimidine metabolism
rbk00250  Alanine, aspartate and glutamate metabolism
rbk00260  Glycine, serine and threonine metabolism
rbk00261  Monobactam biosynthesis
rbk00270  Cysteine and methionine metabolism
rbk00280  Valine, leucine and isoleucine degradation
rbk00290  Valine, leucine and isoleucine biosynthesis
rbk00300  Lysine biosynthesis
rbk00310  Lysine degradation
rbk00330  Arginine and proline metabolism
rbk00332  Carbapenem biosynthesis
rbk00340  Histidine metabolism
rbk00350  Tyrosine metabolism
rbk00360  Phenylalanine metabolism
rbk00361  Chlorocyclohexane and chlorobenzene degradation
rbk00362  Benzoate degradation
rbk00364  Fluorobenzoate degradation
rbk00380  Tryptophan metabolism
rbk00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rbk00401  Novobiocin biosynthesis
rbk00405  Phenazine biosynthesis
rbk00410  beta-Alanine metabolism
rbk00440  Phosphonate and phosphinate metabolism
rbk00450  Selenocompound metabolism
rbk00460  Cyanoamino acid metabolism
rbk00470  D-Amino acid metabolism
rbk00480  Glutathione metabolism
rbk00500  Starch and sucrose metabolism
rbk00520  Amino sugar and nucleotide sugar metabolism
rbk00521  Streptomycin biosynthesis
rbk00523  Polyketide sugar unit biosynthesis
rbk00525  Acarbose and validamycin biosynthesis
rbk00540  Lipopolysaccharide biosynthesis
rbk00541  O-Antigen nucleotide sugar biosynthesis
rbk00543  Exopolysaccharide biosynthesis
rbk00550  Peptidoglycan biosynthesis
rbk00552  Teichoic acid biosynthesis
rbk00561  Glycerolipid metabolism
rbk00562  Inositol phosphate metabolism
rbk00564  Glycerophospholipid metabolism
rbk00620  Pyruvate metabolism
rbk00621  Dioxin degradation
rbk00622  Xylene degradation
rbk00623  Toluene degradation
rbk00625  Chloroalkane and chloroalkene degradation
rbk00626  Naphthalene degradation
rbk00627  Aminobenzoate degradation
rbk00630  Glyoxylate and dicarboxylate metabolism
rbk00633  Nitrotoluene degradation
rbk00640  Propanoate metabolism
rbk00643  Styrene degradation
rbk00650  Butanoate metabolism
rbk00660  C5-Branched dibasic acid metabolism
rbk00670  One carbon pool by folate
rbk00680  Methane metabolism
rbk00710  Carbon fixation by Calvin cycle
rbk00720  Other carbon fixation pathways
rbk00730  Thiamine metabolism
rbk00740  Riboflavin metabolism
rbk00750  Vitamin B6 metabolism
rbk00760  Nicotinate and nicotinamide metabolism
rbk00770  Pantothenate and CoA biosynthesis
rbk00780  Biotin metabolism
rbk00785  Lipoic acid metabolism
rbk00790  Folate biosynthesis
rbk00791  Atrazine degradation
rbk00860  Porphyrin metabolism
rbk00900  Terpenoid backbone biosynthesis
rbk00903  Limonene degradation
rbk00906  Carotenoid biosynthesis
rbk00907  Pinene, camphor and geraniol degradation
rbk00909  Sesquiterpenoid and triterpenoid biosynthesis
rbk00910  Nitrogen metabolism
rbk00920  Sulfur metabolism
rbk00930  Caprolactam degradation
rbk00946  Degradation of flavonoids
rbk00999  Biosynthesis of various plant secondary metabolites
rbk01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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