KEGG   PATHWAY: rer01100
Entry
rer01100                    Pathway                                
Name
Metabolic pathways - Rhodococcus erythropolis PR4
Class
Pathway map
rer01100  Metabolic pathways
rer01100

Module
rer_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rer01100]
rer_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rer01100]
rer_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rer01100]
rer_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rer01100]
rer_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rer01100]
rer_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rer01100]
rer_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rer01100]
rer_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:rer01100]
rer_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rer01100]
rer_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rer01100]
rer_M00012  Glyoxylate cycle [PATH:rer01100]
rer_M00015  Proline biosynthesis, glutamate => proline [PATH:rer01100]
rer_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rer01100]
rer_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rer01100]
rer_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rer01100]
rer_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:rer01100]
rer_M00021  Cysteine biosynthesis, serine => cysteine [PATH:rer01100]
rer_M00026  Histidine biosynthesis, PRPP => histidine [PATH:rer01100]
rer_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:rer01100]
rer_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:rer01100]
rer_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:rer01100]
rer_M00035  Methionine degradation [PATH:rer01100]
rer_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rer01100]
rer_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rer01100]
rer_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rer01100]
rer_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rer01100]
rer_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rer01100]
rer_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rer01100]
rer_M00082  Fatty acid biosynthesis, initiation [PATH:rer01100]
rer_M00083  Fatty acid biosynthesis, elongation [PATH:rer01100]
rer_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:rer01100]
rer_M00087  beta-Oxidation [PATH:rer01100]
rer_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rer01100]
rer_M00098  Acylglycerol degradation [PATH:rer01100]
rer_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rer01100]
rer_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:rer01100]
rer_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rer01100]
rer_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:rer01100]
rer_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:rer01100]
rer_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:rer01100]
rer_M00149  Succinate dehydrogenase, prokaryotes [PATH:rer01100]
rer_M00151  Cytochrome bc1 complex respiratory unit [PATH:rer01100]
rer_M00155  Cytochrome c oxidase, prokaryotes [PATH:rer01100]
rer_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:rer01100]
rer_M00168  CAM (Crassulacean acid metabolism), dark [PATH:rer01100]
rer_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:rer01100]
rer_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rer01100]
rer_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:rer01100]
rer_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rer01100]
rer_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rer01100]
rer_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:rer01100]
rer_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:rer01100]
rer_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rer01100]
rer_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rer01100]
rer_M00621  Glycine cleavage system [PATH:rer01100]
rer_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:rer01100]
rer_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rer01100]
rer_M00793  dTDP-L-rhamnose biosynthesis [PATH:rer01100]
rer_M00844  Arginine biosynthesis, ornithine => arginine [PATH:rer01100]
rer_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:rer01100]
rer_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rer01100]
rer_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rer01100]
rer_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:rer01100]
rer_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rer01100]
rer_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:rer01100]
rer_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:rer01100]
rer_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rer01100]
rer_M00970  Proline degradation, proline => glutamate [PATH:rer01100]
Organism
Rhodococcus erythropolis PR4 [GN:rer]
Related
pathway
rer00010  Glycolysis / Gluconeogenesis
rer00020  Citrate cycle (TCA cycle)
rer00030  Pentose phosphate pathway
rer00040  Pentose and glucuronate interconversions
rer00051  Fructose and mannose metabolism
rer00052  Galactose metabolism
rer00053  Ascorbate and aldarate metabolism
rer00061  Fatty acid biosynthesis
rer00062  Fatty acid elongation
rer00071  Fatty acid degradation
rer00100  Steroid biosynthesis
rer00130  Ubiquinone and other terpenoid-quinone biosynthesis
rer00190  Oxidative phosphorylation
rer00220  Arginine biosynthesis
rer00230  Purine metabolism
rer00240  Pyrimidine metabolism
rer00250  Alanine, aspartate and glutamate metabolism
rer00260  Glycine, serine and threonine metabolism
rer00261  Monobactam biosynthesis
rer00270  Cysteine and methionine metabolism
rer00280  Valine, leucine and isoleucine degradation
rer00290  Valine, leucine and isoleucine biosynthesis
rer00300  Lysine biosynthesis
rer00310  Lysine degradation
rer00330  Arginine and proline metabolism
rer00332  Carbapenem biosynthesis
rer00340  Histidine metabolism
rer00350  Tyrosine metabolism
rer00360  Phenylalanine metabolism
rer00361  Chlorocyclohexane and chlorobenzene degradation
rer00362  Benzoate degradation
rer00364  Fluorobenzoate degradation
rer00380  Tryptophan metabolism
rer00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rer00401  Novobiocin biosynthesis
rer00405  Phenazine biosynthesis
rer00410  beta-Alanine metabolism
rer00430  Taurine and hypotaurine metabolism
rer00450  Selenocompound metabolism
rer00460  Cyanoamino acid metabolism
rer00470  D-Amino acid metabolism
rer00480  Glutathione metabolism
rer00500  Starch and sucrose metabolism
rer00514  Other types of O-glycan biosynthesis
rer00515  Mannose type O-glycan biosynthesis
rer00520  Amino sugar and nucleotide sugar metabolism
rer00521  Streptomycin biosynthesis
rer00523  Polyketide sugar unit biosynthesis
rer00525  Acarbose and validamycin biosynthesis
rer00541  O-Antigen nucleotide sugar biosynthesis
rer00542  O-Antigen repeat unit biosynthesis
rer00543  Exopolysaccharide biosynthesis
rer00550  Peptidoglycan biosynthesis
rer00552  Teichoic acid biosynthesis
rer00561  Glycerolipid metabolism
rer00562  Inositol phosphate metabolism
rer00564  Glycerophospholipid metabolism
rer00565  Ether lipid metabolism
rer00592  alpha-Linolenic acid metabolism
rer00600  Sphingolipid metabolism
rer00620  Pyruvate metabolism
rer00621  Dioxin degradation
rer00622  Xylene degradation
rer00623  Toluene degradation
rer00625  Chloroalkane and chloroalkene degradation
rer00626  Naphthalene degradation
rer00627  Aminobenzoate degradation
rer00630  Glyoxylate and dicarboxylate metabolism
rer00640  Propanoate metabolism
rer00643  Styrene degradation
rer00650  Butanoate metabolism
rer00660  C5-Branched dibasic acid metabolism
rer00670  One carbon pool by folate
rer00680  Methane metabolism
rer00710  Carbon fixation by Calvin cycle
rer00720  Other carbon fixation pathways
rer00730  Thiamine metabolism
rer00740  Riboflavin metabolism
rer00750  Vitamin B6 metabolism
rer00760  Nicotinate and nicotinamide metabolism
rer00770  Pantothenate and CoA biosynthesis
rer00780  Biotin metabolism
rer00785  Lipoic acid metabolism
rer00790  Folate biosynthesis
rer00791  Atrazine degradation
rer00860  Porphyrin metabolism
rer00900  Terpenoid backbone biosynthesis
rer00903  Limonene degradation
rer00906  Carotenoid biosynthesis
rer00907  Pinene, camphor and geraniol degradation
rer00910  Nitrogen metabolism
rer00920  Sulfur metabolism
rer00930  Caprolactam degradation
rer00946  Degradation of flavonoids
rer00984  Steroid degradation
rer00999  Biosynthesis of various plant secondary metabolites
rer01040  Biosynthesis of unsaturated fatty acids
rer01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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