PATHWAY: ret01100 Help Entry ret01100                    Pathway                                 Name Metabolic pathways - Rhizobium etli CFN 42 Class BRITE hierarchy Pathway map ret01100   Metabolic pathways Module ret_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ret01100] ret_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ret01100] ret_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ret01100] ret_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ret01100] ret_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ret01100] ret_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ret01100] ret_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ret01100] ret_M00012   Glyoxylate cycle [PATH:ret01100] ret_M00015   Proline biosynthesis, glutamate => proline [PATH:ret01100] ret_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ret01100] ret_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ret01100] ret_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ret01100] ret_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ret01100] ret_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:ret01100] ret_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ret01100] ret_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ret01100] ret_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:ret01100] ret_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ret01100] ret_M00026   Histidine biosynthesis, PRPP => histidine [PATH:ret01100] ret_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ret01100] ret_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:ret01100] ret_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:ret01100] ret_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ret01100] ret_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ret01100] ret_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ret01100] ret_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ret01100] ret_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ret01100] ret_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ret01100] ret_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ret01100] ret_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ret01100] ret_M00082   Fatty acid biosynthesis, initiation [PATH:ret01100] ret_M00083   Fatty acid biosynthesis, elongation [PATH:ret01100] ret_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:ret01100] ret_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:ret01100] ret_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ret01100] ret_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ret01100] ret_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ret01100] ret_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:ret01100] ret_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ret01100] ret_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:ret01100] ret_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:ret01100] ret_M00140   C1-unit interconversion, prokaryotes [PATH:ret01100] ret_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:ret01100] ret_M00149   Succinate dehydrogenase, prokaryotes [PATH:ret01100] ret_M00151   Cytochrome bc1 complex respiratory unit [PATH:ret01100] ret_M00155   Cytochrome c oxidase, prokaryotes [PATH:ret01100] ret_M00156   Cytochrome c oxidase, cbb3-type [PATH:ret01100] ret_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ret01100] ret_M00169   CAM (Crassulacean acid metabolism), light [PATH:ret01100] ret_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:ret01100] ret_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ret01100] ret_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:ret01100] ret_M00417   Cytochrome o ubiquinol oxidase [PATH:ret01100] ret_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ret01100] ret_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:ret01100] ret_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ret01100] ret_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:ret01100] ret_M00555   Betaine biosynthesis, choline => betaine [PATH:ret01100] ret_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:ret01100] ret_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ret01100] ret_M00621   Glycine cleavage system [PATH:ret01100] ret_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:ret01100] ret_M00793   dTDP-L-rhamnose biosynthesis [PATH:ret01100] ret_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ret01100] ret_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ret01100] ret_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:ret01100] ret_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ret01100] ret_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ret01100] ret_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:ret01100] ret_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ret01100] ret_M00919   Ectoine degradation, ectoine => aspartate [PATH:ret01100] ret_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:ret01100] ret_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ret01100] ret_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:ret01100] ret_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:ret01100] ret_M00970   Proline degradation, proline => glutamate [PATH:ret01100] Organism Rhizobium etli CFN 42 [GN:ret] Related pathway ret00010   Glycolysis / Gluconeogenesis ret00020   Citrate cycle (TCA cycle) ret00030   Pentose phosphate pathway ret00040   Pentose and glucuronate interconversions ret00051   Fructose and mannose metabolism ret00052   Galactose metabolism ret00053   Ascorbate and aldarate metabolism ret00061   Fatty acid biosynthesis ret00071   Fatty acid degradation ret00130   Ubiquinone and other terpenoid-quinone biosynthesis ret00190   Oxidative phosphorylation ret00220   Arginine biosynthesis ret00230   Purine metabolism ret00240   Pyrimidine metabolism ret00250   Alanine, aspartate and glutamate metabolism ret00260   Glycine, serine and threonine metabolism ret00261   Monobactam biosynthesis ret00270   Cysteine and methionine metabolism ret00280   Valine, leucine and isoleucine degradation ret00290   Valine, leucine and isoleucine biosynthesis ret00300   Lysine biosynthesis ret00310   Lysine degradation ret00330   Arginine and proline metabolism ret00332   Carbapenem biosynthesis ret00340   Histidine metabolism ret00350   Tyrosine metabolism ret00360   Phenylalanine metabolism ret00361   Chlorocyclohexane and chlorobenzene degradation ret00362   Benzoate degradation ret00364   Fluorobenzoate degradation ret00380   Tryptophan metabolism ret00400   Phenylalanine, tyrosine and tryptophan biosynthesis ret00401   Novobiocin biosynthesis ret00410   beta-Alanine metabolism ret00430   Taurine and hypotaurine metabolism ret00440   Phosphonate and phosphinate metabolism ret00450   Selenocompound metabolism ret00460   Cyanoamino acid metabolism ret00470   D-Amino acid metabolism ret00480   Glutathione metabolism ret00500   Starch and sucrose metabolism ret00511   Other glycan degradation ret00520   Amino sugar and nucleotide sugar metabolism ret00521   Streptomycin biosynthesis ret00523   Polyketide sugar unit biosynthesis ret00525   Acarbose and validamycin biosynthesis ret00540   Lipopolysaccharide biosynthesis ret00541   O-Antigen nucleotide sugar biosynthesis ret00543   Exopolysaccharide biosynthesis ret00550   Peptidoglycan biosynthesis ret00552   Teichoic acid biosynthesis ret00561   Glycerolipid metabolism ret00562   Inositol phosphate metabolism ret00564   Glycerophospholipid metabolism ret00600   Sphingolipid metabolism ret00620   Pyruvate metabolism ret00622   Xylene degradation ret00623   Toluene degradation ret00625   Chloroalkane and chloroalkene degradation ret00626   Naphthalene degradation ret00627   Aminobenzoate degradation ret00630   Glyoxylate and dicarboxylate metabolism ret00633   Nitrotoluene degradation ret00640   Propanoate metabolism ret00643   Styrene degradation ret00650   Butanoate metabolism ret00660   C5-Branched dibasic acid metabolism ret00670   One carbon pool by folate ret00680   Methane metabolism ret00730   Thiamine metabolism ret00740   Riboflavin metabolism ret00750   Vitamin B6 metabolism ret00760   Nicotinate and nicotinamide metabolism ret00770   Pantothenate and CoA biosynthesis ret00780   Biotin metabolism ret00785   Lipoic acid metabolism ret00790   Folate biosynthesis ret00791   Atrazine degradation ret00860   Porphyrin metabolism ret00900   Terpenoid backbone biosynthesis ret00903   Limonene degradation ret00906   Carotenoid biosynthesis ret00907   Pinene, camphor and geraniol degradation ret00910   Nitrogen metabolism ret00920   Sulfur metabolism ret00930   Caprolactam degradation ret00946   Degradation of flavonoids ret00997   Biosynthesis of various other secondary metabolites ret00999   Biosynthesis of various plant secondary metabolites ret01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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