KEGG   PATHWAY: ret01100
Entry
ret01100                    Pathway                                
Name
Metabolic pathways - Rhizobium etli CFN 42
Class
Pathway map
ret01100  Metabolic pathways
ret01100

Module
ret_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ret01100]
ret_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ret01100]
ret_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ret01100]
ret_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ret01100]
ret_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ret01100]
ret_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ret01100]
ret_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ret01100]
ret_M00012  Glyoxylate cycle [PATH:ret01100]
ret_M00015  Proline biosynthesis, glutamate => proline [PATH:ret01100]
ret_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ret01100]
ret_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ret01100]
ret_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ret01100]
ret_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ret01100]
ret_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ret01100]
ret_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ret01100]
ret_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ret01100]
ret_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ret01100]
ret_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ret01100]
ret_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ret01100]
ret_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:ret01100]
ret_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:ret01100]
ret_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ret01100]
ret_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ret01100]
ret_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ret01100]
ret_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ret01100]
ret_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ret01100]
ret_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ret01100]
ret_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ret01100]
ret_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ret01100]
ret_M00082  Fatty acid biosynthesis, initiation [PATH:ret01100]
ret_M00083  Fatty acid biosynthesis, elongation [PATH:ret01100]
ret_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ret01100]
ret_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:ret01100]
ret_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ret01100]
ret_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ret01100]
ret_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ret01100]
ret_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ret01100]
ret_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ret01100]
ret_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ret01100]
ret_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:ret01100]
ret_M00140  C1-unit interconversion, prokaryotes [PATH:ret01100]
ret_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ret01100]
ret_M00149  Succinate dehydrogenase, prokaryotes [PATH:ret01100]
ret_M00151  Cytochrome bc1 complex respiratory unit [PATH:ret01100]
ret_M00155  Cytochrome c oxidase, prokaryotes [PATH:ret01100]
ret_M00156  Cytochrome c oxidase, cbb3-type [PATH:ret01100]
ret_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ret01100]
ret_M00169  CAM (Crassulacean acid metabolism), light [PATH:ret01100]
ret_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:ret01100]
ret_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ret01100]
ret_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:ret01100]
ret_M00417  Cytochrome o ubiquinol oxidase [PATH:ret01100]
ret_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ret01100]
ret_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:ret01100]
ret_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ret01100]
ret_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:ret01100]
ret_M00555  Betaine biosynthesis, choline => betaine [PATH:ret01100]
ret_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:ret01100]
ret_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ret01100]
ret_M00621  Glycine cleavage system [PATH:ret01100]
ret_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:ret01100]
ret_M00793  dTDP-L-rhamnose biosynthesis [PATH:ret01100]
ret_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ret01100]
ret_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ret01100]
ret_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:ret01100]
ret_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ret01100]
ret_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ret01100]
ret_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:ret01100]
ret_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ret01100]
ret_M00919  Ectoine degradation, ectoine => aspartate [PATH:ret01100]
ret_M00925  Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:ret01100]
ret_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ret01100]
ret_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:ret01100]
ret_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:ret01100]
ret_M00970  Proline degradation, proline => glutamate [PATH:ret01100]
Organism
Rhizobium etli CFN 42 [GN:ret]
Related
pathway
ret00010  Glycolysis / Gluconeogenesis
ret00020  Citrate cycle (TCA cycle)
ret00030  Pentose phosphate pathway
ret00040  Pentose and glucuronate interconversions
ret00051  Fructose and mannose metabolism
ret00052  Galactose metabolism
ret00053  Ascorbate and aldarate metabolism
ret00061  Fatty acid biosynthesis
ret00071  Fatty acid degradation
ret00074  Mycolic acid biosynthesis
ret00130  Ubiquinone and other terpenoid-quinone biosynthesis
ret00190  Oxidative phosphorylation
ret00220  Arginine biosynthesis
ret00230  Purine metabolism
ret00240  Pyrimidine metabolism
ret00250  Alanine, aspartate and glutamate metabolism
ret00260  Glycine, serine and threonine metabolism
ret00261  Monobactam biosynthesis
ret00270  Cysteine and methionine metabolism
ret00280  Valine, leucine and isoleucine degradation
ret00290  Valine, leucine and isoleucine biosynthesis
ret00300  Lysine biosynthesis
ret00310  Lysine degradation
ret00330  Arginine and proline metabolism
ret00332  Carbapenem biosynthesis
ret00340  Histidine metabolism
ret00350  Tyrosine metabolism
ret00360  Phenylalanine metabolism
ret00361  Chlorocyclohexane and chlorobenzene degradation
ret00362  Benzoate degradation
ret00364  Fluorobenzoate degradation
ret00380  Tryptophan metabolism
ret00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ret00401  Novobiocin biosynthesis
ret00410  beta-Alanine metabolism
ret00430  Taurine and hypotaurine metabolism
ret00440  Phosphonate and phosphinate metabolism
ret00450  Selenocompound metabolism
ret00460  Cyanoamino acid metabolism
ret00470  D-Amino acid metabolism
ret00480  Glutathione metabolism
ret00500  Starch and sucrose metabolism
ret00511  Other glycan degradation
ret00520  Amino sugar and nucleotide sugar metabolism
ret00521  Streptomycin biosynthesis
ret00523  Polyketide sugar unit biosynthesis
ret00525  Acarbose and validamycin biosynthesis
ret00540  Lipopolysaccharide biosynthesis
ret00541  O-Antigen nucleotide sugar biosynthesis
ret00543  Exopolysaccharide biosynthesis
ret00550  Peptidoglycan biosynthesis
ret00552  Teichoic acid biosynthesis
ret00561  Glycerolipid metabolism
ret00562  Inositol phosphate metabolism
ret00564  Glycerophospholipid metabolism
ret00600  Sphingolipid metabolism
ret00620  Pyruvate metabolism
ret00622  Xylene degradation
ret00623  Toluene degradation
ret00625  Chloroalkane and chloroalkene degradation
ret00626  Naphthalene degradation
ret00627  Aminobenzoate degradation
ret00630  Glyoxylate and dicarboxylate metabolism
ret00633  Nitrotoluene degradation
ret00640  Propanoate metabolism
ret00643  Styrene degradation
ret00650  Butanoate metabolism
ret00660  C5-Branched dibasic acid metabolism
ret00670  One carbon pool by folate
ret00680  Methane metabolism
ret00710  Carbon fixation by Calvin cycle
ret00720  Other carbon fixation pathways
ret00730  Thiamine metabolism
ret00740  Riboflavin metabolism
ret00750  Vitamin B6 metabolism
ret00760  Nicotinate and nicotinamide metabolism
ret00770  Pantothenate and CoA biosynthesis
ret00780  Biotin metabolism
ret00785  Lipoic acid metabolism
ret00790  Folate biosynthesis
ret00791  Atrazine degradation
ret00860  Porphyrin metabolism
ret00900  Terpenoid backbone biosynthesis
ret00903  Limonene degradation
ret00906  Carotenoid biosynthesis
ret00907  Pinene, camphor and geraniol degradation
ret00910  Nitrogen metabolism
ret00920  Sulfur metabolism
ret00930  Caprolactam degradation
ret00946  Degradation of flavonoids
ret00997  Biosynthesis of various other secondary metabolites
ret00999  Biosynthesis of various plant secondary metabolites
ret01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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