PATHWAY: rfl01100 Help Entry rfl01100                    Pathway                                 Name Metabolic pathways - Roseomonas fluvialis Class BRITE hierarchy Pathway map rfl01100   Metabolic pathways Module rfl_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rfl01100] rfl_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rfl01100] rfl_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rfl01100] rfl_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rfl01100] rfl_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rfl01100] rfl_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rfl01100] rfl_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rfl01100] rfl_M00012   Glyoxylate cycle [PATH:rfl01100] rfl_M00015   Proline biosynthesis, glutamate => proline [PATH:rfl01100] rfl_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rfl01100] rfl_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rfl01100] rfl_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rfl01100] rfl_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rfl01100] rfl_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rfl01100] rfl_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:rfl01100] rfl_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rfl01100] rfl_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rfl01100] rfl_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rfl01100] rfl_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rfl01100] rfl_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rfl01100] rfl_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rfl01100] rfl_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rfl01100] rfl_M00082   Fatty acid biosynthesis, initiation [PATH:rfl01100] rfl_M00083   Fatty acid biosynthesis, elongation [PATH:rfl01100] rfl_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rfl01100] rfl_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:rfl01100] rfl_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rfl01100] rfl_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:rfl01100] rfl_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rfl01100] rfl_M00140   C1-unit interconversion, prokaryotes [PATH:rfl01100] rfl_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rfl01100] rfl_M00149   Succinate dehydrogenase, prokaryotes [PATH:rfl01100] rfl_M00150   Fumarate reductase, prokaryotes [PATH:rfl01100] rfl_M00151   Cytochrome bc1 complex respiratory unit [PATH:rfl01100] rfl_M00155   Cytochrome c oxidase, prokaryotes [PATH:rfl01100] rfl_M00156   Cytochrome c oxidase, cbb3-type [PATH:rfl01100] rfl_M00169   CAM (Crassulacean acid metabolism), light [PATH:rfl01100] rfl_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:rfl01100] rfl_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rfl01100] rfl_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rfl01100] rfl_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:rfl01100] rfl_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rfl01100] rfl_M00621   Glycine cleavage system [PATH:rfl01100] rfl_M00793   dTDP-L-rhamnose biosynthesis [PATH:rfl01100] rfl_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rfl01100] rfl_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rfl01100] rfl_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rfl01100] rfl_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rfl01100] rfl_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rfl01100] rfl_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rfl01100] rfl_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rfl01100] Organism Roseomonas fluvialis [GN:rfl] Related pathway rfl00010   Glycolysis / Gluconeogenesis rfl00020   Citrate cycle (TCA cycle) rfl00030   Pentose phosphate pathway rfl00040   Pentose and glucuronate interconversions rfl00051   Fructose and mannose metabolism rfl00052   Galactose metabolism rfl00053   Ascorbate and aldarate metabolism rfl00061   Fatty acid biosynthesis rfl00071   Fatty acid degradation rfl00130   Ubiquinone and other terpenoid-quinone biosynthesis rfl00190   Oxidative phosphorylation rfl00220   Arginine biosynthesis rfl00230   Purine metabolism rfl00240   Pyrimidine metabolism rfl00250   Alanine, aspartate and glutamate metabolism rfl00260   Glycine, serine and threonine metabolism rfl00261   Monobactam biosynthesis rfl00270   Cysteine and methionine metabolism rfl00280   Valine, leucine and isoleucine degradation rfl00290   Valine, leucine and isoleucine biosynthesis rfl00300   Lysine biosynthesis rfl00310   Lysine degradation rfl00311   Penicillin and cephalosporin biosynthesis rfl00330   Arginine and proline metabolism rfl00332   Carbapenem biosynthesis rfl00340   Histidine metabolism rfl00350   Tyrosine metabolism rfl00360   Phenylalanine metabolism rfl00361   Chlorocyclohexane and chlorobenzene degradation rfl00362   Benzoate degradation rfl00364   Fluorobenzoate degradation rfl00365   Furfural degradation rfl00380   Tryptophan metabolism rfl00400   Phenylalanine, tyrosine and tryptophan biosynthesis rfl00401   Novobiocin biosynthesis rfl00405   Phenazine biosynthesis rfl00410   beta-Alanine metabolism rfl00430   Taurine and hypotaurine metabolism rfl00440   Phosphonate and phosphinate metabolism rfl00450   Selenocompound metabolism rfl00460   Cyanoamino acid metabolism rfl00470   D-Amino acid metabolism rfl00480   Glutathione metabolism rfl00500   Starch and sucrose metabolism rfl00520   Amino sugar and nucleotide sugar metabolism rfl00521   Streptomycin biosynthesis rfl00523   Polyketide sugar unit biosynthesis rfl00525   Acarbose and validamycin biosynthesis rfl00540   Lipopolysaccharide biosynthesis rfl00541   O-Antigen nucleotide sugar biosynthesis rfl00543   Exopolysaccharide biosynthesis rfl00550   Peptidoglycan biosynthesis rfl00552   Teichoic acid biosynthesis rfl00561   Glycerolipid metabolism rfl00562   Inositol phosphate metabolism rfl00564   Glycerophospholipid metabolism rfl00600   Sphingolipid metabolism rfl00620   Pyruvate metabolism rfl00622   Xylene degradation rfl00623   Toluene degradation rfl00624   Polycyclic aromatic hydrocarbon degradation rfl00625   Chloroalkane and chloroalkene degradation rfl00626   Naphthalene degradation rfl00627   Aminobenzoate degradation rfl00630   Glyoxylate and dicarboxylate metabolism rfl00633   Nitrotoluene degradation rfl00640   Propanoate metabolism rfl00643   Styrene degradation rfl00650   Butanoate metabolism rfl00660   C5-Branched dibasic acid metabolism rfl00670   One carbon pool by folate rfl00680   Methane metabolism rfl00730   Thiamine metabolism rfl00740   Riboflavin metabolism rfl00750   Vitamin B6 metabolism rfl00760   Nicotinate and nicotinamide metabolism rfl00770   Pantothenate and CoA biosynthesis rfl00780   Biotin metabolism rfl00785   Lipoic acid metabolism rfl00790   Folate biosynthesis rfl00791   Atrazine degradation rfl00860   Porphyrin metabolism rfl00900   Terpenoid backbone biosynthesis rfl00903   Limonene degradation rfl00906   Carotenoid biosynthesis rfl00907   Pinene, camphor and geraniol degradation rfl00910   Nitrogen metabolism rfl00920   Sulfur metabolism rfl00930   Caprolactam degradation rfl00999   Biosynthesis of various plant secondary metabolites rfl01040   Biosynthesis of unsaturated fatty acids rfl01055   Biosynthesis of vancomycin group antibiotics rfl01057   Biosynthesis of type II polyketide products KO pathway ko01100     LinkDB All DBs

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