KEGG   PATHWAY: rfr01100
Entry
rfr01100                    Pathway                                
Name
Metabolic pathways - Rhodoferax ferrireducens
Class
Pathway map
rfr01100  Metabolic pathways
rfr01100

Module
rfr_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rfr01100]
rfr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rfr01100]
rfr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rfr01100]
rfr_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rfr01100]
rfr_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:rfr01100]
rfr_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rfr01100]
rfr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rfr01100]
rfr_M00012  Glyoxylate cycle [PATH:rfr01100]
rfr_M00015  Proline biosynthesis, glutamate => proline [PATH:rfr01100]
rfr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rfr01100]
rfr_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rfr01100]
rfr_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rfr01100]
rfr_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:rfr01100]
rfr_M00021  Cysteine biosynthesis, serine => cysteine [PATH:rfr01100]
rfr_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rfr01100]
rfr_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:rfr01100]
rfr_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:rfr01100]
rfr_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:rfr01100]
rfr_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:rfr01100]
rfr_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:rfr01100]
rfr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rfr01100]
rfr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rfr01100]
rfr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rfr01100]
rfr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rfr01100]
rfr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rfr01100]
rfr_M00063  CMP-KDO biosynthesis [PATH:rfr01100]
rfr_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:rfr01100]
rfr_M00082  Fatty acid biosynthesis, initiation [PATH:rfr01100]
rfr_M00083  Fatty acid biosynthesis, elongation [PATH:rfr01100]
rfr_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:rfr01100]
rfr_M00087  beta-Oxidation [PATH:rfr01100]
rfr_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:rfr01100]
rfr_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rfr01100]
rfr_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rfr01100]
rfr_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:rfr01100]
rfr_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:rfr01100]
rfr_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:rfr01100]
rfr_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rfr01100]
rfr_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:rfr01100]
rfr_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:rfr01100]
rfr_M00149  Succinate dehydrogenase, prokaryotes [PATH:rfr01100]
rfr_M00151  Cytochrome bc1 complex respiratory unit [PATH:rfr01100]
rfr_M00155  Cytochrome c oxidase, prokaryotes [PATH:rfr01100]
rfr_M00156  Cytochrome c oxidase, cbb3-type [PATH:rfr01100]
rfr_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:rfr01100]
rfr_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:rfr01100]
rfr_M00168  CAM (Crassulacean acid metabolism), dark [PATH:rfr01100]
rfr_M00169  CAM (Crassulacean acid metabolism), light [PATH:rfr01100]
rfr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rfr01100]
rfr_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rfr01100]
rfr_M00526  Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine [PATH:rfr01100]
rfr_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:rfr01100]
rfr_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:rfr01100]
rfr_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:rfr01100]
rfr_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rfr01100]
rfr_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rfr01100]
rfr_M00621  Glycine cleavage system [PATH:rfr01100]
rfr_M00793  dTDP-L-rhamnose biosynthesis [PATH:rfr01100]
rfr_M00844  Arginine biosynthesis, ornithine => arginine [PATH:rfr01100]
rfr_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rfr01100]
rfr_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:rfr01100]
rfr_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rfr01100]
rfr_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rfr01100]
rfr_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:rfr01100]
rfr_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rfr01100]
rfr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rfr01100]
rfr_M00970  Proline degradation, proline => glutamate [PATH:rfr01100]
Organism
Rhodoferax ferrireducens [GN:rfr]
Related
pathway
rfr00010  Glycolysis / Gluconeogenesis
rfr00020  Citrate cycle (TCA cycle)
rfr00030  Pentose phosphate pathway
rfr00040  Pentose and glucuronate interconversions
rfr00051  Fructose and mannose metabolism
rfr00052  Galactose metabolism
rfr00053  Ascorbate and aldarate metabolism
rfr00061  Fatty acid biosynthesis
rfr00071  Fatty acid degradation
rfr00074  Mycolic acid biosynthesis
rfr00130  Ubiquinone and other terpenoid-quinone biosynthesis
rfr00190  Oxidative phosphorylation
rfr00220  Arginine biosynthesis
rfr00230  Purine metabolism
rfr00240  Pyrimidine metabolism
rfr00250  Alanine, aspartate and glutamate metabolism
rfr00260  Glycine, serine and threonine metabolism
rfr00261  Monobactam biosynthesis
rfr00270  Cysteine and methionine metabolism
rfr00280  Valine, leucine and isoleucine degradation
rfr00290  Valine, leucine and isoleucine biosynthesis
rfr00300  Lysine biosynthesis
rfr00310  Lysine degradation
rfr00330  Arginine and proline metabolism
rfr00332  Carbapenem biosynthesis
rfr00340  Histidine metabolism
rfr00350  Tyrosine metabolism
rfr00360  Phenylalanine metabolism
rfr00361  Chlorocyclohexane and chlorobenzene degradation
rfr00362  Benzoate degradation
rfr00364  Fluorobenzoate degradation
rfr00380  Tryptophan metabolism
rfr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rfr00401  Novobiocin biosynthesis
rfr00410  beta-Alanine metabolism
rfr00430  Taurine and hypotaurine metabolism
rfr00440  Phosphonate and phosphinate metabolism
rfr00450  Selenocompound metabolism
rfr00460  Cyanoamino acid metabolism
rfr00470  D-Amino acid metabolism
rfr00480  Glutathione metabolism
rfr00500  Starch and sucrose metabolism
rfr00520  Amino sugar and nucleotide sugar metabolism
rfr00521  Streptomycin biosynthesis
rfr00523  Polyketide sugar unit biosynthesis
rfr00525  Acarbose and validamycin biosynthesis
rfr00540  Lipopolysaccharide biosynthesis
rfr00541  O-Antigen nucleotide sugar biosynthesis
rfr00543  Exopolysaccharide biosynthesis
rfr00550  Peptidoglycan biosynthesis
rfr00552  Teichoic acid biosynthesis
rfr00561  Glycerolipid metabolism
rfr00562  Inositol phosphate metabolism
rfr00564  Glycerophospholipid metabolism
rfr00565  Ether lipid metabolism
rfr00590  Arachidonic acid metabolism
rfr00592  alpha-Linolenic acid metabolism
rfr00600  Sphingolipid metabolism
rfr00620  Pyruvate metabolism
rfr00621  Dioxin degradation
rfr00622  Xylene degradation
rfr00623  Toluene degradation
rfr00625  Chloroalkane and chloroalkene degradation
rfr00626  Naphthalene degradation
rfr00627  Aminobenzoate degradation
rfr00630  Glyoxylate and dicarboxylate metabolism
rfr00633  Nitrotoluene degradation
rfr00640  Propanoate metabolism
rfr00643  Styrene degradation
rfr00650  Butanoate metabolism
rfr00660  C5-Branched dibasic acid metabolism
rfr00670  One carbon pool by folate
rfr00680  Methane metabolism
rfr00710  Carbon fixation by Calvin cycle
rfr00720  Other carbon fixation pathways
rfr00730  Thiamine metabolism
rfr00740  Riboflavin metabolism
rfr00750  Vitamin B6 metabolism
rfr00760  Nicotinate and nicotinamide metabolism
rfr00770  Pantothenate and CoA biosynthesis
rfr00780  Biotin metabolism
rfr00785  Lipoic acid metabolism
rfr00790  Folate biosynthesis
rfr00860  Porphyrin metabolism
rfr00900  Terpenoid backbone biosynthesis
rfr00903  Limonene degradation
rfr00906  Carotenoid biosynthesis
rfr00907  Pinene, camphor and geraniol degradation
rfr00910  Nitrogen metabolism
rfr00920  Sulfur metabolism
rfr00930  Caprolactam degradation
rfr00946  Degradation of flavonoids
rfr00999  Biosynthesis of various plant secondary metabolites
rfr01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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