KEGG   PATHWAY: rge01100
Entry
rge01100                    Pathway                                
Name
Metabolic pathways - Rubrivivax gelatinosus
Class
Pathway map
rge01100  Metabolic pathways
rge01100

Module
rge_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rge01100]
rge_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rge01100]
rge_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rge01100]
rge_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rge01100]
rge_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rge01100]
rge_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:rge01100]
rge_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rge01100]
rge_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rge01100]
rge_M00012  Glyoxylate cycle [PATH:rge01100]
rge_M00015  Proline biosynthesis, glutamate => proline [PATH:rge01100]
rge_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rge01100]
rge_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rge01100]
rge_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rge01100]
rge_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:rge01100]
rge_M00021  Cysteine biosynthesis, serine => cysteine [PATH:rge01100]
rge_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rge01100]
rge_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:rge01100]
rge_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:rge01100]
rge_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:rge01100]
rge_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:rge01100]
rge_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rge01100]
rge_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rge01100]
rge_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rge01100]
rge_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rge01100]
rge_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rge01100]
rge_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rge01100]
rge_M00063  CMP-KDO biosynthesis [PATH:rge01100]
rge_M00082  Fatty acid biosynthesis, initiation [PATH:rge01100]
rge_M00083  Fatty acid biosynthesis, elongation [PATH:rge01100]
rge_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:rge01100]
rge_M00087  beta-Oxidation [PATH:rge01100]
rge_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rge01100]
rge_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rge01100]
rge_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:rge01100]
rge_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:rge01100]
rge_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:rge01100]
rge_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rge01100]
rge_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:rge01100]
rge_M00140  C1-unit interconversion, prokaryotes [PATH:rge01100]
rge_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:rge01100]
rge_M00149  Succinate dehydrogenase, prokaryotes [PATH:rge01100]
rge_M00150  Fumarate reductase, prokaryotes [PATH:rge01100]
rge_M00151  Cytochrome bc1 complex respiratory unit [PATH:rge01100]
rge_M00155  Cytochrome c oxidase, prokaryotes [PATH:rge01100]
rge_M00156  Cytochrome c oxidase, cbb3-type [PATH:rge01100]
rge_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:rge01100]
rge_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:rge01100]
rge_M00168  CAM (Crassulacean acid metabolism), dark [PATH:rge01100]
rge_M00169  CAM (Crassulacean acid metabolism), light [PATH:rge01100]
rge_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:rge01100]
rge_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rge01100]
rge_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:rge01100]
rge_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rge01100]
rge_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rge01100]
rge_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rge01100]
rge_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rge01100]
rge_M00621  Glycine cleavage system [PATH:rge01100]
rge_M00793  dTDP-L-rhamnose biosynthesis [PATH:rge01100]
rge_M00844  Arginine biosynthesis, ornithine => arginine [PATH:rge01100]
rge_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rge01100]
rge_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:rge01100]
rge_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rge01100]
rge_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rge01100]
rge_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:rge01100]
rge_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rge01100]
rge_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rge01100]
rge_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:rge01100]
rge_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:rge01100]
rge_M00970  Proline degradation, proline => glutamate [PATH:rge01100]
Organism
Rubrivivax gelatinosus [GN:rge]
Related
pathway
rge00010  Glycolysis / Gluconeogenesis
rge00020  Citrate cycle (TCA cycle)
rge00030  Pentose phosphate pathway
rge00040  Pentose and glucuronate interconversions
rge00051  Fructose and mannose metabolism
rge00052  Galactose metabolism
rge00053  Ascorbate and aldarate metabolism
rge00061  Fatty acid biosynthesis
rge00071  Fatty acid degradation
rge00130  Ubiquinone and other terpenoid-quinone biosynthesis
rge00190  Oxidative phosphorylation
rge00220  Arginine biosynthesis
rge00230  Purine metabolism
rge00240  Pyrimidine metabolism
rge00250  Alanine, aspartate and glutamate metabolism
rge00260  Glycine, serine and threonine metabolism
rge00261  Monobactam biosynthesis
rge00270  Cysteine and methionine metabolism
rge00280  Valine, leucine and isoleucine degradation
rge00290  Valine, leucine and isoleucine biosynthesis
rge00300  Lysine biosynthesis
rge00310  Lysine degradation
rge00311  Penicillin and cephalosporin biosynthesis
rge00330  Arginine and proline metabolism
rge00332  Carbapenem biosynthesis
rge00340  Histidine metabolism
rge00350  Tyrosine metabolism
rge00360  Phenylalanine metabolism
rge00361  Chlorocyclohexane and chlorobenzene degradation
rge00362  Benzoate degradation
rge00364  Fluorobenzoate degradation
rge00380  Tryptophan metabolism
rge00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rge00401  Novobiocin biosynthesis
rge00410  beta-Alanine metabolism
rge00430  Taurine and hypotaurine metabolism
rge00440  Phosphonate and phosphinate metabolism
rge00450  Selenocompound metabolism
rge00460  Cyanoamino acid metabolism
rge00470  D-Amino acid metabolism
rge00480  Glutathione metabolism
rge00500  Starch and sucrose metabolism
rge00520  Amino sugar and nucleotide sugar metabolism
rge00521  Streptomycin biosynthesis
rge00523  Polyketide sugar unit biosynthesis
rge00525  Acarbose and validamycin biosynthesis
rge00540  Lipopolysaccharide biosynthesis
rge00541  O-Antigen nucleotide sugar biosynthesis
rge00543  Exopolysaccharide biosynthesis
rge00550  Peptidoglycan biosynthesis
rge00552  Teichoic acid biosynthesis
rge00561  Glycerolipid metabolism
rge00562  Inositol phosphate metabolism
rge00564  Glycerophospholipid metabolism
rge00565  Ether lipid metabolism
rge00592  alpha-Linolenic acid metabolism
rge00620  Pyruvate metabolism
rge00623  Toluene degradation
rge00625  Chloroalkane and chloroalkene degradation
rge00626  Naphthalene degradation
rge00627  Aminobenzoate degradation
rge00630  Glyoxylate and dicarboxylate metabolism
rge00633  Nitrotoluene degradation
rge00640  Propanoate metabolism
rge00643  Styrene degradation
rge00650  Butanoate metabolism
rge00660  C5-Branched dibasic acid metabolism
rge00670  One carbon pool by folate
rge00680  Methane metabolism
rge00710  Carbon fixation by Calvin cycle
rge00720  Other carbon fixation pathways
rge00730  Thiamine metabolism
rge00740  Riboflavin metabolism
rge00750  Vitamin B6 metabolism
rge00760  Nicotinate and nicotinamide metabolism
rge00770  Pantothenate and CoA biosynthesis
rge00780  Biotin metabolism
rge00785  Lipoic acid metabolism
rge00790  Folate biosynthesis
rge00860  Porphyrin metabolism
rge00900  Terpenoid backbone biosynthesis
rge00906  Carotenoid biosynthesis
rge00907  Pinene, camphor and geraniol degradation
rge00910  Nitrogen metabolism
rge00920  Sulfur metabolism
rge00946  Degradation of flavonoids
rge00999  Biosynthesis of various plant secondary metabolites
rge01040  Biosynthesis of unsaturated fatty acids
rge01055  Biosynthesis of vancomycin group antibiotics
KO pathway
ko01100   
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