KEGG   PATHWAY: rgu01100
Entry
rgu01100                    Pathway                                
Name
Metabolic pathways - Piscinibacter gummiphilus
Class
Pathway map
rgu01100  Metabolic pathways
rgu01100

Module
rgu_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rgu01100]
rgu_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rgu01100]
rgu_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rgu01100]
rgu_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rgu01100]
rgu_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rgu01100]
rgu_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:rgu01100]
rgu_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rgu01100]
rgu_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rgu01100]
rgu_M00012  Glyoxylate cycle [PATH:rgu01100]
rgu_M00015  Proline biosynthesis, glutamate => proline [PATH:rgu01100]
rgu_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rgu01100]
rgu_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rgu01100]
rgu_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rgu01100]
rgu_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:rgu01100]
rgu_M00021  Cysteine biosynthesis, serine => cysteine [PATH:rgu01100]
rgu_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rgu01100]
rgu_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:rgu01100]
rgu_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:rgu01100]
rgu_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:rgu01100]
rgu_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:rgu01100]
rgu_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:rgu01100]
rgu_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rgu01100]
rgu_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rgu01100]
rgu_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rgu01100]
rgu_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rgu01100]
rgu_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rgu01100]
rgu_M00063  CMP-KDO biosynthesis [PATH:rgu01100]
rgu_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:rgu01100]
rgu_M00082  Fatty acid biosynthesis, initiation [PATH:rgu01100]
rgu_M00083  Fatty acid biosynthesis, elongation [PATH:rgu01100]
rgu_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:rgu01100]
rgu_M00087  beta-Oxidation [PATH:rgu01100]
rgu_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rgu01100]
rgu_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rgu01100]
rgu_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:rgu01100]
rgu_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:rgu01100]
rgu_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:rgu01100]
rgu_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:rgu01100]
rgu_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rgu01100]
rgu_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:rgu01100]
rgu_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:rgu01100]
rgu_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:rgu01100]
rgu_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:rgu01100]
rgu_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:rgu01100]
rgu_M00149  Succinate dehydrogenase, prokaryotes [PATH:rgu01100]
rgu_M00151  Cytochrome bc1 complex respiratory unit [PATH:rgu01100]
rgu_M00155  Cytochrome c oxidase, prokaryotes [PATH:rgu01100]
rgu_M00156  Cytochrome c oxidase, cbb3-type [PATH:rgu01100]
rgu_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:rgu01100]
rgu_M00168  CAM (Crassulacean acid metabolism), dark [PATH:rgu01100]
rgu_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:rgu01100]
rgu_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rgu01100]
rgu_M00417  Cytochrome o ubiquinol oxidase [PATH:rgu01100]
rgu_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rgu01100]
rgu_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:rgu01100]
rgu_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rgu01100]
rgu_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rgu01100]
rgu_M00621  Glycine cleavage system [PATH:rgu01100]
rgu_M00793  dTDP-L-rhamnose biosynthesis [PATH:rgu01100]
rgu_M00844  Arginine biosynthesis, ornithine => arginine [PATH:rgu01100]
rgu_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rgu01100]
rgu_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rgu01100]
rgu_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rgu01100]
rgu_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rgu01100]
rgu_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:rgu01100]
rgu_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:rgu01100]
rgu_M00970  Proline degradation, proline => glutamate [PATH:rgu01100]
Organism
Piscinibacter gummiphilus [GN:rgu]
Related
pathway
rgu00010  Glycolysis / Gluconeogenesis
rgu00020  Citrate cycle (TCA cycle)
rgu00030  Pentose phosphate pathway
rgu00040  Pentose and glucuronate interconversions
rgu00051  Fructose and mannose metabolism
rgu00052  Galactose metabolism
rgu00053  Ascorbate and aldarate metabolism
rgu00061  Fatty acid biosynthesis
rgu00071  Fatty acid degradation
rgu00074  Mycolic acid biosynthesis
rgu00130  Ubiquinone and other terpenoid-quinone biosynthesis
rgu00190  Oxidative phosphorylation
rgu00220  Arginine biosynthesis
rgu00230  Purine metabolism
rgu00240  Pyrimidine metabolism
rgu00250  Alanine, aspartate and glutamate metabolism
rgu00260  Glycine, serine and threonine metabolism
rgu00261  Monobactam biosynthesis
rgu00270  Cysteine and methionine metabolism
rgu00280  Valine, leucine and isoleucine degradation
rgu00290  Valine, leucine and isoleucine biosynthesis
rgu00300  Lysine biosynthesis
rgu00310  Lysine degradation
rgu00311  Penicillin and cephalosporin biosynthesis
rgu00330  Arginine and proline metabolism
rgu00332  Carbapenem biosynthesis
rgu00340  Histidine metabolism
rgu00350  Tyrosine metabolism
rgu00360  Phenylalanine metabolism
rgu00361  Chlorocyclohexane and chlorobenzene degradation
rgu00362  Benzoate degradation
rgu00364  Fluorobenzoate degradation
rgu00380  Tryptophan metabolism
rgu00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rgu00401  Novobiocin biosynthesis
rgu00405  Phenazine biosynthesis
rgu00410  beta-Alanine metabolism
rgu00430  Taurine and hypotaurine metabolism
rgu00440  Phosphonate and phosphinate metabolism
rgu00450  Selenocompound metabolism
rgu00460  Cyanoamino acid metabolism
rgu00470  D-Amino acid metabolism
rgu00480  Glutathione metabolism
rgu00500  Starch and sucrose metabolism
rgu00520  Amino sugar and nucleotide sugar metabolism
rgu00521  Streptomycin biosynthesis
rgu00523  Polyketide sugar unit biosynthesis
rgu00525  Acarbose and validamycin biosynthesis
rgu00540  Lipopolysaccharide biosynthesis
rgu00541  O-Antigen nucleotide sugar biosynthesis
rgu00543  Exopolysaccharide biosynthesis
rgu00550  Peptidoglycan biosynthesis
rgu00552  Teichoic acid biosynthesis
rgu00561  Glycerolipid metabolism
rgu00562  Inositol phosphate metabolism
rgu00564  Glycerophospholipid metabolism
rgu00565  Ether lipid metabolism
rgu00572  Arabinogalactan biosynthesis - Mycobacterium
rgu00592  alpha-Linolenic acid metabolism
rgu00620  Pyruvate metabolism
rgu00621  Dioxin degradation
rgu00622  Xylene degradation
rgu00623  Toluene degradation
rgu00624  Polycyclic aromatic hydrocarbon degradation
rgu00625  Chloroalkane and chloroalkene degradation
rgu00626  Naphthalene degradation
rgu00627  Aminobenzoate degradation
rgu00630  Glyoxylate and dicarboxylate metabolism
rgu00633  Nitrotoluene degradation
rgu00640  Propanoate metabolism
rgu00642  Ethylbenzene degradation
rgu00643  Styrene degradation
rgu00650  Butanoate metabolism
rgu00660  C5-Branched dibasic acid metabolism
rgu00670  One carbon pool by folate
rgu00680  Methane metabolism
rgu00710  Carbon fixation by Calvin cycle
rgu00720  Other carbon fixation pathways
rgu00730  Thiamine metabolism
rgu00740  Riboflavin metabolism
rgu00750  Vitamin B6 metabolism
rgu00760  Nicotinate and nicotinamide metabolism
rgu00770  Pantothenate and CoA biosynthesis
rgu00780  Biotin metabolism
rgu00785  Lipoic acid metabolism
rgu00790  Folate biosynthesis
rgu00791  Atrazine degradation
rgu00860  Porphyrin metabolism
rgu00900  Terpenoid backbone biosynthesis
rgu00906  Carotenoid biosynthesis
rgu00907  Pinene, camphor and geraniol degradation
rgu00910  Nitrogen metabolism
rgu00920  Sulfur metabolism
rgu00930  Caprolactam degradation
rgu00946  Degradation of flavonoids
rgu00999  Biosynthesis of various plant secondary metabolites
rgu01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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