PATHWAY: riu01100 Help Entry riu01100                    Pathway                                 Name Metabolic pathways - Rahnella inusitata Class BRITE hierarchy Pathway map riu01100   Metabolic pathways Module riu_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:riu01100] riu_M00002   Glycolysis, core module involving three-carbon compounds [PATH:riu01100] riu_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:riu01100] riu_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:riu01100] riu_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:riu01100] riu_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:riu01100] riu_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:riu01100] riu_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:riu01100] riu_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:riu01100] riu_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:riu01100] riu_M00012   Glyoxylate cycle [PATH:riu01100] riu_M00015   Proline biosynthesis, glutamate => proline [PATH:riu01100] riu_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:riu01100] riu_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:riu01100] riu_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:riu01100] riu_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:riu01100] riu_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:riu01100] riu_M00021   Cysteine biosynthesis, serine => cysteine [PATH:riu01100] riu_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:riu01100] riu_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:riu01100] riu_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:riu01100] riu_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:riu01100] riu_M00026   Histidine biosynthesis, PRPP => histidine [PATH:riu01100] riu_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:riu01100] riu_M00034   Methionine salvage pathway [PATH:riu01100] riu_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:riu01100] riu_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:riu01100] riu_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:riu01100] riu_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:riu01100] riu_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:riu01100] riu_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:riu01100] riu_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:riu01100] riu_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:riu01100] riu_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:riu01100] riu_M00063   CMP-KDO biosynthesis [PATH:riu01100] riu_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:riu01100] riu_M00082   Fatty acid biosynthesis, initiation [PATH:riu01100] riu_M00083   Fatty acid biosynthesis, elongation [PATH:riu01100] riu_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:riu01100] riu_M00087   beta-Oxidation [PATH:riu01100] riu_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:riu01100] riu_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:riu01100] riu_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:riu01100] riu_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:riu01100] riu_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:riu01100] riu_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:riu01100] riu_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:riu01100] riu_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:riu01100] riu_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:riu01100] riu_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:riu01100] riu_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:riu01100] riu_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:riu01100] riu_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:riu01100] riu_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:riu01100] riu_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:riu01100] riu_M00149   Succinate dehydrogenase, prokaryotes [PATH:riu01100] riu_M00150   Fumarate reductase, prokaryotes [PATH:riu01100] riu_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:riu01100] riu_M00168   CAM (Crassulacean acid metabolism), dark [PATH:riu01100] riu_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:riu01100] riu_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:riu01100] riu_M00417   Cytochrome o ubiquinol oxidase [PATH:riu01100] riu_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:riu01100] riu_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:riu01100] riu_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:riu01100] riu_M00550   Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:riu01100] riu_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:riu01100] riu_M00555   Betaine biosynthesis, choline => betaine [PATH:riu01100] riu_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:riu01100] riu_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:riu01100] riu_M00621   Glycine cleavage system [PATH:riu01100] riu_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:riu01100] riu_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:riu01100] riu_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:riu01100] riu_M00793   dTDP-L-rhamnose biosynthesis [PATH:riu01100] riu_M00844   Arginine biosynthesis, ornithine => arginine [PATH:riu01100] riu_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:riu01100] riu_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:riu01100] riu_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:riu01100] riu_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:riu01100] riu_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:riu01100] riu_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:riu01100] riu_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:riu01100] riu_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:riu01100] riu_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:riu01100] riu_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:riu01100] riu_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:riu01100] riu_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:riu01100] riu_M00970   Proline degradation, proline => glutamate [PATH:riu01100] Organism Rahnella inusitata [GN:riu] Related pathway riu00010   Glycolysis / Gluconeogenesis riu00020   Citrate cycle (TCA cycle) riu00030   Pentose phosphate pathway riu00040   Pentose and glucuronate interconversions riu00051   Fructose and mannose metabolism riu00052   Galactose metabolism riu00053   Ascorbate and aldarate metabolism riu00061   Fatty acid biosynthesis riu00071   Fatty acid degradation riu00130   Ubiquinone and other terpenoid-quinone biosynthesis riu00190   Oxidative phosphorylation riu00220   Arginine biosynthesis riu00230   Purine metabolism riu00240   Pyrimidine metabolism riu00250   Alanine, aspartate and glutamate metabolism riu00260   Glycine, serine and threonine metabolism riu00261   Monobactam biosynthesis riu00270   Cysteine and methionine metabolism riu00280   Valine, leucine and isoleucine degradation riu00290   Valine, leucine and isoleucine biosynthesis riu00300   Lysine biosynthesis riu00310   Lysine degradation riu00330   Arginine and proline metabolism riu00332   Carbapenem biosynthesis riu00340   Histidine metabolism riu00350   Tyrosine metabolism riu00360   Phenylalanine metabolism riu00361   Chlorocyclohexane and chlorobenzene degradation riu00362   Benzoate degradation riu00364   Fluorobenzoate degradation riu00380   Tryptophan metabolism riu00400   Phenylalanine, tyrosine and tryptophan biosynthesis riu00401   Novobiocin biosynthesis riu00410   beta-Alanine metabolism riu00430   Taurine and hypotaurine metabolism riu00440   Phosphonate and phosphinate metabolism riu00450   Selenocompound metabolism riu00460   Cyanoamino acid metabolism riu00470   D-Amino acid metabolism riu00480   Glutathione metabolism riu00500   Starch and sucrose metabolism riu00511   Other glycan degradation riu00520   Amino sugar and nucleotide sugar metabolism riu00521   Streptomycin biosynthesis riu00523   Polyketide sugar unit biosynthesis riu00525   Acarbose and validamycin biosynthesis riu00540   Lipopolysaccharide biosynthesis riu00541   O-Antigen nucleotide sugar biosynthesis riu00542   O-Antigen repeat unit biosynthesis riu00543   Exopolysaccharide biosynthesis riu00550   Peptidoglycan biosynthesis riu00552   Teichoic acid biosynthesis riu00561   Glycerolipid metabolism riu00562   Inositol phosphate metabolism riu00564   Glycerophospholipid metabolism riu00565   Ether lipid metabolism riu00591   Linoleic acid metabolism riu00592   alpha-Linolenic acid metabolism riu00600   Sphingolipid metabolism riu00620   Pyruvate metabolism riu00623   Toluene degradation riu00624   Polycyclic aromatic hydrocarbon degradation riu00625   Chloroalkane and chloroalkene degradation riu00626   Naphthalene degradation riu00627   Aminobenzoate degradation riu00630   Glyoxylate and dicarboxylate metabolism riu00633   Nitrotoluene degradation riu00640   Propanoate metabolism riu00650   Butanoate metabolism riu00660   C5-Branched dibasic acid metabolism riu00670   One carbon pool by folate riu00680   Methane metabolism riu00710   Carbon fixation by Calvin cycle riu00720   Other carbon fixation pathways riu00730   Thiamine metabolism riu00740   Riboflavin metabolism riu00750   Vitamin B6 metabolism riu00760   Nicotinate and nicotinamide metabolism riu00770   Pantothenate and CoA biosynthesis riu00780   Biotin metabolism riu00785   Lipoic acid metabolism riu00790   Folate biosynthesis riu00791   Atrazine degradation riu00860   Porphyrin metabolism riu00900   Terpenoid backbone biosynthesis riu00907   Pinene, camphor and geraniol degradation riu00910   Nitrogen metabolism riu00920   Sulfur metabolism riu00930   Caprolactam degradation riu00946   Degradation of flavonoids riu00999   Biosynthesis of various plant secondary metabolites riu01040   Biosynthesis of unsaturated fatty acids riu01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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