PATHWAY: rle01100 Help Entry rle01100                    Pathway                                 Name Metabolic pathways - Rhizobium johnstonii Class BRITE hierarchy Pathway map rle01100   Metabolic pathways Module rle_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rle01100] rle_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rle01100] rle_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rle01100] rle_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rle01100] rle_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rle01100] rle_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rle01100] rle_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rle01100] rle_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rle01100] rle_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rle01100] rle_M00012   Glyoxylate cycle [PATH:rle01100] rle_M00015   Proline biosynthesis, glutamate => proline [PATH:rle01100] rle_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rle01100] rle_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rle01100] rle_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rle01100] rle_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rle01100] rle_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rle01100] rle_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rle01100] rle_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:rle01100] rle_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:rle01100] rle_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rle01100] rle_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rle01100] rle_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:rle01100] rle_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:rle01100] rle_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rle01100] rle_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:rle01100] rle_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rle01100] rle_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rle01100] rle_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rle01100] rle_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rle01100] rle_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:rle01100] rle_M00082   Fatty acid biosynthesis, initiation [PATH:rle01100] rle_M00083   Fatty acid biosynthesis, elongation [PATH:rle01100] rle_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rle01100] rle_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:rle01100] rle_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rle01100] rle_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rle01100] rle_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:rle01100] rle_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rle01100] rle_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:rle01100] rle_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:rle01100] rle_M00140   C1-unit interconversion, prokaryotes [PATH:rle01100] rle_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rle01100] rle_M00149   Succinate dehydrogenase, prokaryotes [PATH:rle01100] rle_M00151   Cytochrome bc1 complex respiratory unit [PATH:rle01100] rle_M00155   Cytochrome c oxidase, prokaryotes [PATH:rle01100] rle_M00156   Cytochrome c oxidase, cbb3-type [PATH:rle01100] rle_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rle01100] rle_M00169   CAM (Crassulacean acid metabolism), light [PATH:rle01100] rle_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:rle01100] rle_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rle01100] rle_M00417   Cytochrome o ubiquinol oxidase [PATH:rle01100] rle_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rle01100] rle_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:rle01100] rle_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rle01100] rle_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:rle01100] rle_M00555   Betaine biosynthesis, choline => betaine [PATH:rle01100] rle_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rle01100] rle_M00621   Glycine cleavage system [PATH:rle01100] rle_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rle01100] rle_M00793   dTDP-L-rhamnose biosynthesis [PATH:rle01100] rle_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rle01100] rle_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rle01100] rle_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:rle01100] rle_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rle01100] rle_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rle01100] rle_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:rle01100] rle_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rle01100] rle_M00919   Ectoine degradation, ectoine => aspartate [PATH:rle01100] rle_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:rle01100] rle_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rle01100] rle_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rle01100] rle_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rle01100] rle_M00970   Proline degradation, proline => glutamate [PATH:rle01100] Organism Rhizobium johnstonii [GN:rle] Related pathway rle00010   Glycolysis / Gluconeogenesis rle00020   Citrate cycle (TCA cycle) rle00030   Pentose phosphate pathway rle00040   Pentose and glucuronate interconversions rle00051   Fructose and mannose metabolism rle00052   Galactose metabolism rle00053   Ascorbate and aldarate metabolism rle00061   Fatty acid biosynthesis rle00071   Fatty acid degradation rle00130   Ubiquinone and other terpenoid-quinone biosynthesis rle00190   Oxidative phosphorylation rle00220   Arginine biosynthesis rle00230   Purine metabolism rle00240   Pyrimidine metabolism rle00250   Alanine, aspartate and glutamate metabolism rle00260   Glycine, serine and threonine metabolism rle00261   Monobactam biosynthesis rle00270   Cysteine and methionine metabolism rle00280   Valine, leucine and isoleucine degradation rle00290   Valine, leucine and isoleucine biosynthesis rle00300   Lysine biosynthesis rle00310   Lysine degradation rle00311   Penicillin and cephalosporin biosynthesis rle00330   Arginine and proline metabolism rle00332   Carbapenem biosynthesis rle00340   Histidine metabolism rle00350   Tyrosine metabolism rle00360   Phenylalanine metabolism rle00361   Chlorocyclohexane and chlorobenzene degradation rle00362   Benzoate degradation rle00364   Fluorobenzoate degradation rle00380   Tryptophan metabolism rle00400   Phenylalanine, tyrosine and tryptophan biosynthesis rle00401   Novobiocin biosynthesis rle00410   beta-Alanine metabolism rle00430   Taurine and hypotaurine metabolism rle00440   Phosphonate and phosphinate metabolism rle00450   Selenocompound metabolism rle00460   Cyanoamino acid metabolism rle00470   D-Amino acid metabolism rle00480   Glutathione metabolism rle00500   Starch and sucrose metabolism rle00511   Other glycan degradation rle00520   Amino sugar and nucleotide sugar metabolism rle00521   Streptomycin biosynthesis rle00523   Polyketide sugar unit biosynthesis rle00525   Acarbose and validamycin biosynthesis rle00540   Lipopolysaccharide biosynthesis rle00541   O-Antigen nucleotide sugar biosynthesis rle00543   Exopolysaccharide biosynthesis rle00550   Peptidoglycan biosynthesis rle00552   Teichoic acid biosynthesis rle00561   Glycerolipid metabolism rle00562   Inositol phosphate metabolism rle00564   Glycerophospholipid metabolism rle00600   Sphingolipid metabolism rle00620   Pyruvate metabolism rle00621   Dioxin degradation rle00622   Xylene degradation rle00623   Toluene degradation rle00625   Chloroalkane and chloroalkene degradation rle00626   Naphthalene degradation rle00627   Aminobenzoate degradation rle00630   Glyoxylate and dicarboxylate metabolism rle00633   Nitrotoluene degradation rle00640   Propanoate metabolism rle00643   Styrene degradation rle00650   Butanoate metabolism rle00660   C5-Branched dibasic acid metabolism rle00670   One carbon pool by folate rle00680   Methane metabolism rle00710   Carbon fixation by Calvin cycle rle00720   Other carbon fixation pathways rle00730   Thiamine metabolism rle00740   Riboflavin metabolism rle00750   Vitamin B6 metabolism rle00760   Nicotinate and nicotinamide metabolism rle00770   Pantothenate and CoA biosynthesis rle00780   Biotin metabolism rle00785   Lipoic acid metabolism rle00790   Folate biosynthesis rle00791   Atrazine degradation rle00860   Porphyrin metabolism rle00900   Terpenoid backbone biosynthesis rle00903   Limonene degradation rle00906   Carotenoid biosynthesis rle00907   Pinene, camphor and geraniol degradation rle00910   Nitrogen metabolism rle00920   Sulfur metabolism rle00930   Caprolactam degradation rle00946   Degradation of flavonoids rle00996   Biosynthesis of various alkaloids rle00997   Biosynthesis of various other secondary metabolites rle00999   Biosynthesis of various plant secondary metabolites rle01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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