PATHWAY: rli01100 Help Entry rli01100                    Pathway                                 Name Metabolic pathways - Roseobacter litoralis Class BRITE hierarchy Pathway map rli01100   Metabolic pathways Module rli_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rli01100] rli_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rli01100] rli_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rli01100] rli_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rli01100] rli_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rli01100] rli_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rli01100] rli_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rli01100] rli_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rli01100] rli_M00015   Proline biosynthesis, glutamate => proline [PATH:rli01100] rli_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rli01100] rli_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rli01100] rli_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rli01100] rli_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rli01100] rli_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rli01100] rli_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:rli01100] rli_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rli01100] rli_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rli01100] rli_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:rli01100] rli_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rli01100] rli_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rli01100] rli_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rli01100] rli_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rli01100] rli_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:rli01100] rli_M00082   Fatty acid biosynthesis, initiation [PATH:rli01100] rli_M00083   Fatty acid biosynthesis, elongation [PATH:rli01100] rli_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rli01100] rli_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:rli01100] rli_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:rli01100] rli_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rli01100] rli_M00140   C1-unit interconversion, prokaryotes [PATH:rli01100] rli_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rli01100] rli_M00149   Succinate dehydrogenase, prokaryotes [PATH:rli01100] rli_M00151   Cytochrome bc1 complex respiratory unit [PATH:rli01100] rli_M00155   Cytochrome c oxidase, prokaryotes [PATH:rli01100] rli_M00156   Cytochrome c oxidase, cbb3-type [PATH:rli01100] rli_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rli01100] rli_M00169   CAM (Crassulacean acid metabolism), light [PATH:rli01100] rli_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rli01100] rli_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:rli01100] rli_M00373   Ethylmalonyl pathway [PATH:rli01100] rli_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rli01100] rli_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:rli01100] rli_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rli01100] rli_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:rli01100] rli_M00555   Betaine biosynthesis, choline => betaine [PATH:rli01100] rli_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rli01100] rli_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rli01100] rli_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:rli01100] rli_M00621   Glycine cleavage system [PATH:rli01100] rli_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rli01100] rli_M00793   dTDP-L-rhamnose biosynthesis [PATH:rli01100] rli_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rli01100] rli_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rli01100] rli_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rli01100] rli_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rli01100] rli_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:rli01100] rli_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rli01100] rli_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:rli01100] rli_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rli01100] rli_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rli01100] rli_M00970   Proline degradation, proline => glutamate [PATH:rli01100] Organism Roseobacter litoralis [GN:rli] Related pathway rli00010   Glycolysis / Gluconeogenesis rli00020   Citrate cycle (TCA cycle) rli00030   Pentose phosphate pathway rli00040   Pentose and glucuronate interconversions rli00051   Fructose and mannose metabolism rli00052   Galactose metabolism rli00053   Ascorbate and aldarate metabolism rli00061   Fatty acid biosynthesis rli00071   Fatty acid degradation rli00100   Steroid biosynthesis rli00121   Secondary bile acid biosynthesis rli00130   Ubiquinone and other terpenoid-quinone biosynthesis rli00190   Oxidative phosphorylation rli00220   Arginine biosynthesis rli00230   Purine metabolism rli00240   Pyrimidine metabolism rli00250   Alanine, aspartate and glutamate metabolism rli00260   Glycine, serine and threonine metabolism rli00261   Monobactam biosynthesis rli00270   Cysteine and methionine metabolism rli00280   Valine, leucine and isoleucine degradation rli00290   Valine, leucine and isoleucine biosynthesis rli00300   Lysine biosynthesis rli00310   Lysine degradation rli00330   Arginine and proline metabolism rli00332   Carbapenem biosynthesis rli00340   Histidine metabolism rli00350   Tyrosine metabolism rli00360   Phenylalanine metabolism rli00361   Chlorocyclohexane and chlorobenzene degradation rli00362   Benzoate degradation rli00380   Tryptophan metabolism rli00400   Phenylalanine, tyrosine and tryptophan biosynthesis rli00401   Novobiocin biosynthesis rli00410   beta-Alanine metabolism rli00430   Taurine and hypotaurine metabolism rli00440   Phosphonate and phosphinate metabolism rli00450   Selenocompound metabolism rli00460   Cyanoamino acid metabolism rli00470   D-Amino acid metabolism rli00480   Glutathione metabolism rli00500   Starch and sucrose metabolism rli00520   Amino sugar and nucleotide sugar metabolism rli00521   Streptomycin biosynthesis rli00523   Polyketide sugar unit biosynthesis rli00525   Acarbose and validamycin biosynthesis rli00540   Lipopolysaccharide biosynthesis rli00541   O-Antigen nucleotide sugar biosynthesis rli00543   Exopolysaccharide biosynthesis rli00550   Peptidoglycan biosynthesis rli00552   Teichoic acid biosynthesis rli00561   Glycerolipid metabolism rli00562   Inositol phosphate metabolism rli00564   Glycerophospholipid metabolism rli00600   Sphingolipid metabolism rli00620   Pyruvate metabolism rli00625   Chloroalkane and chloroalkene degradation rli00626   Naphthalene degradation rli00627   Aminobenzoate degradation rli00630   Glyoxylate and dicarboxylate metabolism rli00640   Propanoate metabolism rli00643   Styrene degradation rli00650   Butanoate metabolism rli00660   C5-Branched dibasic acid metabolism rli00670   One carbon pool by folate rli00680   Methane metabolism rli00710   Carbon fixation by Calvin cycle rli00720   Other carbon fixation pathways rli00730   Thiamine metabolism rli00740   Riboflavin metabolism rli00750   Vitamin B6 metabolism rli00760   Nicotinate and nicotinamide metabolism rli00770   Pantothenate and CoA biosynthesis rli00780   Biotin metabolism rli00785   Lipoic acid metabolism rli00790   Folate biosynthesis rli00791   Atrazine degradation rli00860   Porphyrin metabolism rli00900   Terpenoid backbone biosynthesis rli00903   Limonene degradation rli00906   Carotenoid biosynthesis rli00907   Pinene, camphor and geraniol degradation rli00910   Nitrogen metabolism rli00920   Sulfur metabolism rli00930   Caprolactam degradation rli00946   Degradation of flavonoids rli00999   Biosynthesis of various plant secondary metabolites KO pathway ko01100     LinkDB All DBs

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