PATHWAY: rmt01100 Help Entry rmt01100                    Pathway                                 Name Metabolic pathways - Roseomonas marmotae Class BRITE hierarchy Pathway map rmt01100   Metabolic pathways Module rmt_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rmt01100] rmt_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rmt01100] rmt_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rmt01100] rmt_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rmt01100] rmt_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rmt01100] rmt_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rmt01100] rmt_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rmt01100] rmt_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rmt01100] rmt_M00012   Glyoxylate cycle [PATH:rmt01100] rmt_M00015   Proline biosynthesis, glutamate => proline [PATH:rmt01100] rmt_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rmt01100] rmt_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rmt01100] rmt_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rmt01100] rmt_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rmt01100] rmt_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rmt01100] rmt_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:rmt01100] rmt_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rmt01100] rmt_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rmt01100] rmt_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rmt01100] rmt_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rmt01100] rmt_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rmt01100] rmt_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rmt01100] rmt_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rmt01100] rmt_M00082   Fatty acid biosynthesis, initiation [PATH:rmt01100] rmt_M00083   Fatty acid biosynthesis, elongation [PATH:rmt01100] rmt_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rmt01100] rmt_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:rmt01100] rmt_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rmt01100] rmt_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:rmt01100] rmt_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rmt01100] rmt_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rmt01100] rmt_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:rmt01100] rmt_M00140   C1-unit interconversion, prokaryotes [PATH:rmt01100] rmt_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rmt01100] rmt_M00149   Succinate dehydrogenase, prokaryotes [PATH:rmt01100] rmt_M00151   Cytochrome bc1 complex respiratory unit [PATH:rmt01100] rmt_M00155   Cytochrome c oxidase, prokaryotes [PATH:rmt01100] rmt_M00168   CAM (Crassulacean acid metabolism), dark [PATH:rmt01100] rmt_M00169   CAM (Crassulacean acid metabolism), light [PATH:rmt01100] rmt_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rmt01100] rmt_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rmt01100] rmt_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:rmt01100] rmt_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rmt01100] rmt_M00621   Glycine cleavage system [PATH:rmt01100] rmt_M00623   Phthalate degradation, phthalate => protocatechuate [PATH:rmt01100] rmt_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rmt01100] rmt_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rmt01100] rmt_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rmt01100] rmt_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rmt01100] rmt_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:rmt01100] rmt_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rmt01100] rmt_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rmt01100] rmt_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rmt01100] rmt_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rmt01100] rmt_M00970   Proline degradation, proline => glutamate [PATH:rmt01100] Organism Roseomonas marmotae [GN:rmt] Related pathway rmt00010   Glycolysis / Gluconeogenesis rmt00020   Citrate cycle (TCA cycle) rmt00030   Pentose phosphate pathway rmt00040   Pentose and glucuronate interconversions rmt00051   Fructose and mannose metabolism rmt00052   Galactose metabolism rmt00053   Ascorbate and aldarate metabolism rmt00061   Fatty acid biosynthesis rmt00071   Fatty acid degradation rmt00074   Mycolic acid biosynthesis rmt00121   Secondary bile acid biosynthesis rmt00130   Ubiquinone and other terpenoid-quinone biosynthesis rmt00190   Oxidative phosphorylation rmt00220   Arginine biosynthesis rmt00230   Purine metabolism rmt00240   Pyrimidine metabolism rmt00250   Alanine, aspartate and glutamate metabolism rmt00260   Glycine, serine and threonine metabolism rmt00261   Monobactam biosynthesis rmt00270   Cysteine and methionine metabolism rmt00280   Valine, leucine and isoleucine degradation rmt00290   Valine, leucine and isoleucine biosynthesis rmt00300   Lysine biosynthesis rmt00310   Lysine degradation rmt00311   Penicillin and cephalosporin biosynthesis rmt00330   Arginine and proline metabolism rmt00332   Carbapenem biosynthesis rmt00340   Histidine metabolism rmt00350   Tyrosine metabolism rmt00360   Phenylalanine metabolism rmt00361   Chlorocyclohexane and chlorobenzene degradation rmt00362   Benzoate degradation rmt00364   Fluorobenzoate degradation rmt00380   Tryptophan metabolism rmt00400   Phenylalanine, tyrosine and tryptophan biosynthesis rmt00401   Novobiocin biosynthesis rmt00410   beta-Alanine metabolism rmt00430   Taurine and hypotaurine metabolism rmt00440   Phosphonate and phosphinate metabolism rmt00450   Selenocompound metabolism rmt00460   Cyanoamino acid metabolism rmt00470   D-Amino acid metabolism rmt00480   Glutathione metabolism rmt00500   Starch and sucrose metabolism rmt00520   Amino sugar and nucleotide sugar metabolism rmt00521   Streptomycin biosynthesis rmt00523   Polyketide sugar unit biosynthesis rmt00525   Acarbose and validamycin biosynthesis rmt00540   Lipopolysaccharide biosynthesis rmt00541   O-Antigen nucleotide sugar biosynthesis rmt00543   Exopolysaccharide biosynthesis rmt00550   Peptidoglycan biosynthesis rmt00552   Teichoic acid biosynthesis rmt00561   Glycerolipid metabolism rmt00562   Inositol phosphate metabolism rmt00564   Glycerophospholipid metabolism rmt00620   Pyruvate metabolism rmt00621   Dioxin degradation rmt00622   Xylene degradation rmt00623   Toluene degradation rmt00624   Polycyclic aromatic hydrocarbon degradation rmt00625   Chloroalkane and chloroalkene degradation rmt00626   Naphthalene degradation rmt00627   Aminobenzoate degradation rmt00630   Glyoxylate and dicarboxylate metabolism rmt00640   Propanoate metabolism rmt00643   Styrene degradation rmt00650   Butanoate metabolism rmt00660   C5-Branched dibasic acid metabolism rmt00670   One carbon pool by folate rmt00680   Methane metabolism rmt00710   Carbon fixation by Calvin cycle rmt00720   Other carbon fixation pathways rmt00730   Thiamine metabolism rmt00740   Riboflavin metabolism rmt00750   Vitamin B6 metabolism rmt00760   Nicotinate and nicotinamide metabolism rmt00770   Pantothenate and CoA biosynthesis rmt00780   Biotin metabolism rmt00785   Lipoic acid metabolism rmt00790   Folate biosynthesis rmt00860   Porphyrin metabolism rmt00900   Terpenoid backbone biosynthesis rmt00906   Carotenoid biosynthesis rmt00907   Pinene, camphor and geraniol degradation rmt00909   Sesquiterpenoid and triterpenoid biosynthesis rmt00910   Nitrogen metabolism rmt00920   Sulfur metabolism rmt00930   Caprolactam degradation rmt00998   Biosynthesis of various antibiotics rmt00999   Biosynthesis of various plant secondary metabolites rmt01040   Biosynthesis of unsaturated fatty acids rmt01053   Biosynthesis of siderophore group nonribosomal peptides rmt01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system