PATHWAY: rop01100 Help Entry rop01100                    Pathway                                 Name Metabolic pathways - Rhodococcus opacus B4 Class BRITE hierarchy Pathway map rop01100   Metabolic pathways Module rop_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rop01100] rop_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rop01100] rop_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rop01100] rop_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rop01100] rop_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rop01100] rop_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rop01100] rop_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rop01100] rop_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rop01100] rop_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rop01100] rop_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rop01100] rop_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rop01100] rop_M00012   Glyoxylate cycle [PATH:rop01100] rop_M00015   Proline biosynthesis, glutamate => proline [PATH:rop01100] rop_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rop01100] rop_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rop01100] rop_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rop01100] rop_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rop01100] rop_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rop01100] rop_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rop01100] rop_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:rop01100] rop_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rop01100] rop_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:rop01100] rop_M00035   Methionine degradation [PATH:rop01100] rop_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rop01100] rop_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rop01100] rop_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rop01100] rop_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rop01100] rop_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rop01100] rop_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rop01100] rop_M00082   Fatty acid biosynthesis, initiation [PATH:rop01100] rop_M00083   Fatty acid biosynthesis, elongation [PATH:rop01100] rop_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rop01100] rop_M00087   beta-Oxidation [PATH:rop01100] rop_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rop01100] rop_M00098   Acylglycerol degradation [PATH:rop01100] rop_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rop01100] rop_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:rop01100] rop_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rop01100] rop_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rop01100] rop_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:rop01100] rop_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:rop01100] rop_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rop01100] rop_M00149   Succinate dehydrogenase, prokaryotes [PATH:rop01100] rop_M00151   Cytochrome bc1 complex respiratory unit [PATH:rop01100] rop_M00155   Cytochrome c oxidase, prokaryotes [PATH:rop01100] rop_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rop01100] rop_M00168   CAM (Crassulacean acid metabolism), dark [PATH:rop01100] rop_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:rop01100] rop_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rop01100] rop_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:rop01100] rop_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rop01100] rop_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:rop01100] rop_M00545   Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:rop01100] rop_M00546   Purine degradation, xanthine => urea [PATH:rop01100] rop_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rop01100] rop_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:rop01100] rop_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:rop01100] rop_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:rop01100] rop_M00555   Betaine biosynthesis, choline => betaine [PATH:rop01100] rop_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:rop01100] rop_M00569   Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA [PATH:rop01100] rop_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rop01100] rop_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rop01100] rop_M00621   Glycine cleavage system [PATH:rop01100] rop_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:rop01100] rop_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rop01100] rop_M00793   dTDP-L-rhamnose biosynthesis [PATH:rop01100] rop_M00810   Nicotine degradation, pyridine pathway, nicotine => 2,6-dihydroxypyridine/succinate semialdehyde [PATH:rop01100] rop_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rop01100] rop_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:rop01100] rop_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rop01100] rop_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rop01100] rop_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rop01100] rop_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:rop01100] rop_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:rop01100] rop_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:rop01100] rop_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rop01100] rop_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rop01100] rop_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rop01100] rop_M00970   Proline degradation, proline => glutamate [PATH:rop01100] rop_M00972   Proline metabolism [PATH:rop01100] Organism Rhodococcus opacus B4 [GN:rop] Related pathway rop00010   Glycolysis / Gluconeogenesis rop00020   Citrate cycle (TCA cycle) rop00030   Pentose phosphate pathway rop00040   Pentose and glucuronate interconversions rop00051   Fructose and mannose metabolism rop00052   Galactose metabolism rop00053   Ascorbate and aldarate metabolism rop00061   Fatty acid biosynthesis rop00071   Fatty acid degradation rop00100   Steroid biosynthesis rop00121   Secondary bile acid biosynthesis rop00130   Ubiquinone and other terpenoid-quinone biosynthesis rop00190   Oxidative phosphorylation rop00220   Arginine biosynthesis rop00230   Purine metabolism rop00240   Pyrimidine metabolism rop00250   Alanine, aspartate and glutamate metabolism rop00260   Glycine, serine and threonine metabolism rop00261   Monobactam biosynthesis rop00270   Cysteine and methionine metabolism rop00280   Valine, leucine and isoleucine degradation rop00290   Valine, leucine and isoleucine biosynthesis rop00300   Lysine biosynthesis rop00310   Lysine degradation rop00311   Penicillin and cephalosporin biosynthesis rop00330   Arginine and proline metabolism rop00332   Carbapenem biosynthesis rop00340   Histidine metabolism rop00350   Tyrosine metabolism rop00360   Phenylalanine metabolism rop00361   Chlorocyclohexane and chlorobenzene degradation rop00362   Benzoate degradation rop00364   Fluorobenzoate degradation rop00380   Tryptophan metabolism rop00400   Phenylalanine, tyrosine and tryptophan biosynthesis rop00401   Novobiocin biosynthesis rop00410   beta-Alanine metabolism rop00430   Taurine and hypotaurine metabolism rop00450   Selenocompound metabolism rop00460   Cyanoamino acid metabolism rop00470   D-Amino acid metabolism rop00480   Glutathione metabolism rop00500   Starch and sucrose metabolism rop00514   Other types of O-glycan biosynthesis rop00515   Mannose type O-glycan biosynthesis rop00520   Amino sugar and nucleotide sugar metabolism rop00521   Streptomycin biosynthesis rop00523   Polyketide sugar unit biosynthesis rop00525   Acarbose and validamycin biosynthesis rop00540   Lipopolysaccharide biosynthesis rop00541   O-Antigen nucleotide sugar biosynthesis rop00542   O-Antigen repeat unit biosynthesis rop00543   Exopolysaccharide biosynthesis rop00550   Peptidoglycan biosynthesis rop00552   Teichoic acid biosynthesis rop00561   Glycerolipid metabolism rop00562   Inositol phosphate metabolism rop00564   Glycerophospholipid metabolism rop00565   Ether lipid metabolism rop00592   alpha-Linolenic acid metabolism rop00600   Sphingolipid metabolism rop00620   Pyruvate metabolism rop00621   Dioxin degradation rop00622   Xylene degradation rop00623   Toluene degradation rop00625   Chloroalkane and chloroalkene degradation rop00626   Naphthalene degradation rop00627   Aminobenzoate degradation rop00630   Glyoxylate and dicarboxylate metabolism rop00633   Nitrotoluene degradation rop00640   Propanoate metabolism rop00642   Ethylbenzene degradation rop00643   Styrene degradation rop00650   Butanoate metabolism rop00660   C5-Branched dibasic acid metabolism rop00670   One carbon pool by folate rop00680   Methane metabolism rop00710   Carbon fixation by Calvin cycle rop00720   Other carbon fixation pathways rop00730   Thiamine metabolism rop00740   Riboflavin metabolism rop00750   Vitamin B6 metabolism rop00760   Nicotinate and nicotinamide metabolism rop00770   Pantothenate and CoA biosynthesis rop00780   Biotin metabolism rop00785   Lipoic acid metabolism rop00790   Folate biosynthesis rop00791   Atrazine degradation rop00860   Porphyrin metabolism rop00900   Terpenoid backbone biosynthesis rop00903   Limonene degradation rop00906   Carotenoid biosynthesis rop00907   Pinene, camphor and geraniol degradation rop00910   Nitrogen metabolism rop00920   Sulfur metabolism rop00930   Caprolactam degradation rop00946   Degradation of flavonoids rop00984   Steroid degradation rop00999   Biosynthesis of various plant secondary metabolites rop01040   Biosynthesis of unsaturated fatty acids rop01051   Biosynthesis of ansamycins rop01053   Biosynthesis of siderophore group nonribosomal peptides rop01057   Biosynthesis of type II polyketide products rop01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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