KEGG   PATHWAY: rpd01100
Entry
rpd01100                    Pathway                                
Name
Metabolic pathways - Rhodopseudomonas palustris BisB5
Class
Pathway map
rpd01100  Metabolic pathways
rpd01100

Module
rpd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rpd01100]
rpd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rpd01100]
rpd_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rpd01100]
rpd_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rpd01100]
rpd_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rpd01100]
rpd_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rpd01100]
rpd_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:rpd01100]
rpd_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rpd01100]
rpd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rpd01100]
rpd_M00012  Glyoxylate cycle [PATH:rpd01100]
rpd_M00015  Proline biosynthesis, glutamate => proline [PATH:rpd01100]
rpd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rpd01100]
rpd_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rpd01100]
rpd_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rpd01100]
rpd_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:rpd01100]
rpd_M00021  Cysteine biosynthesis, serine => cysteine [PATH:rpd01100]
rpd_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rpd01100]
rpd_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:rpd01100]
rpd_M00026  Histidine biosynthesis, PRPP => histidine [PATH:rpd01100]
rpd_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:rpd01100]
rpd_M00035  Methionine degradation [PATH:rpd01100]
rpd_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rpd01100]
rpd_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rpd01100]
rpd_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rpd01100]
rpd_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rpd01100]
rpd_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:rpd01100]
rpd_M00082  Fatty acid biosynthesis, initiation [PATH:rpd01100]
rpd_M00083  Fatty acid biosynthesis, elongation [PATH:rpd01100]
rpd_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:rpd01100]
rpd_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:rpd01100]
rpd_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rpd01100]
rpd_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rpd01100]
rpd_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:rpd01100]
rpd_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:rpd01100]
rpd_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rpd01100]
rpd_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:rpd01100]
rpd_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:rpd01100]
rpd_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:rpd01100]
rpd_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:rpd01100]
rpd_M00149  Succinate dehydrogenase, prokaryotes [PATH:rpd01100]
rpd_M00151  Cytochrome bc1 complex respiratory unit [PATH:rpd01100]
rpd_M00155  Cytochrome c oxidase, prokaryotes [PATH:rpd01100]
rpd_M00156  Cytochrome c oxidase, cbb3-type [PATH:rpd01100]
rpd_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:rpd01100]
rpd_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:rpd01100]
rpd_M00168  CAM (Crassulacean acid metabolism), dark [PATH:rpd01100]
rpd_M00169  CAM (Crassulacean acid metabolism), light [PATH:rpd01100]
rpd_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:rpd01100]
rpd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rpd01100]
rpd_M00417  Cytochrome o ubiquinol oxidase [PATH:rpd01100]
rpd_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rpd01100]
rpd_M00540  Benzoate degradation, cyclohexanecarboxylic acid =>pimeloyl-CoA [PATH:rpd01100]
rpd_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:rpd01100]
rpd_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rpd01100]
rpd_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rpd01100]
rpd_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:rpd01100]
rpd_M00621  Glycine cleavage system [PATH:rpd01100]
rpd_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rpd01100]
rpd_M00793  dTDP-L-rhamnose biosynthesis [PATH:rpd01100]
rpd_M00844  Arginine biosynthesis, ornithine => arginine [PATH:rpd01100]
rpd_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rpd01100]
rpd_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rpd01100]
rpd_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rpd01100]
rpd_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:rpd01100]
rpd_M00970  Proline degradation, proline => glutamate [PATH:rpd01100]
Organism
Rhodopseudomonas palustris BisB5 [GN:rpd]
Related
pathway
rpd00010  Glycolysis / Gluconeogenesis
rpd00020  Citrate cycle (TCA cycle)
rpd00030  Pentose phosphate pathway
rpd00040  Pentose and glucuronate interconversions
rpd00051  Fructose and mannose metabolism
rpd00052  Galactose metabolism
rpd00053  Ascorbate and aldarate metabolism
rpd00061  Fatty acid biosynthesis
rpd00071  Fatty acid degradation
rpd00130  Ubiquinone and other terpenoid-quinone biosynthesis
rpd00190  Oxidative phosphorylation
rpd00220  Arginine biosynthesis
rpd00230  Purine metabolism
rpd00240  Pyrimidine metabolism
rpd00250  Alanine, aspartate and glutamate metabolism
rpd00260  Glycine, serine and threonine metabolism
rpd00261  Monobactam biosynthesis
rpd00270  Cysteine and methionine metabolism
rpd00280  Valine, leucine and isoleucine degradation
rpd00290  Valine, leucine and isoleucine biosynthesis
rpd00300  Lysine biosynthesis
rpd00310  Lysine degradation
rpd00330  Arginine and proline metabolism
rpd00332  Carbapenem biosynthesis
rpd00340  Histidine metabolism
rpd00350  Tyrosine metabolism
rpd00360  Phenylalanine metabolism
rpd00361  Chlorocyclohexane and chlorobenzene degradation
rpd00362  Benzoate degradation
rpd00364  Fluorobenzoate degradation
rpd00380  Tryptophan metabolism
rpd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rpd00401  Novobiocin biosynthesis
rpd00410  beta-Alanine metabolism
rpd00430  Taurine and hypotaurine metabolism
rpd00440  Phosphonate and phosphinate metabolism
rpd00450  Selenocompound metabolism
rpd00460  Cyanoamino acid metabolism
rpd00470  D-Amino acid metabolism
rpd00480  Glutathione metabolism
rpd00500  Starch and sucrose metabolism
rpd00520  Amino sugar and nucleotide sugar metabolism
rpd00521  Streptomycin biosynthesis
rpd00523  Polyketide sugar unit biosynthesis
rpd00525  Acarbose and validamycin biosynthesis
rpd00540  Lipopolysaccharide biosynthesis
rpd00541  O-Antigen nucleotide sugar biosynthesis
rpd00543  Exopolysaccharide biosynthesis
rpd00550  Peptidoglycan biosynthesis
rpd00552  Teichoic acid biosynthesis
rpd00561  Glycerolipid metabolism
rpd00562  Inositol phosphate metabolism
rpd00564  Glycerophospholipid metabolism
rpd00620  Pyruvate metabolism
rpd00623  Toluene degradation
rpd00625  Chloroalkane and chloroalkene degradation
rpd00626  Naphthalene degradation
rpd00627  Aminobenzoate degradation
rpd00630  Glyoxylate and dicarboxylate metabolism
rpd00633  Nitrotoluene degradation
rpd00640  Propanoate metabolism
rpd00643  Styrene degradation
rpd00650  Butanoate metabolism
rpd00660  C5-Branched dibasic acid metabolism
rpd00670  One carbon pool by folate
rpd00680  Methane metabolism
rpd00710  Carbon fixation by Calvin cycle
rpd00720  Other carbon fixation pathways
rpd00730  Thiamine metabolism
rpd00740  Riboflavin metabolism
rpd00750  Vitamin B6 metabolism
rpd00760  Nicotinate and nicotinamide metabolism
rpd00770  Pantothenate and CoA biosynthesis
rpd00780  Biotin metabolism
rpd00785  Lipoic acid metabolism
rpd00790  Folate biosynthesis
rpd00791  Atrazine degradation
rpd00860  Porphyrin metabolism
rpd00900  Terpenoid backbone biosynthesis
rpd00906  Carotenoid biosynthesis
rpd00907  Pinene, camphor and geraniol degradation
rpd00909  Sesquiterpenoid and triterpenoid biosynthesis
rpd00910  Nitrogen metabolism
rpd00920  Sulfur metabolism
rpd00930  Caprolactam degradation
rpd00946  Degradation of flavonoids
rpd00999  Biosynthesis of various plant secondary metabolites
rpd01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system