KEGG   PATHWAY: rphi01210
Entry
rphi01210                   Pathway                                
Name
2-Oxocarboxylic acid metabolism - Ruditapes philippinarum (Manila clam)
Description
2-Oxocarboxylic acids, also called 2-oxo acids and alpha-keto acids, are the most elementary set of metabolites that includes pyruvate (2-oxopropanoate), 2-oxobutanoate, oxaloacetate (2-oxosuccinate) and 2-oxoglutarate. This diagram illustrates the architecture of chain extension and modification reaction modules for 2-oxocarboxylic acids. The chain extension module RM001 is a tricarboxylic pathway where acetyl-CoA derived carbon is used to extend the chain length by one. The chain modification modules RM002 (including RM032) and RM033, together with a reductive amination step (RC00006 or RC00036), generate basic and branched-chain amino acids, respectively. The modification module RM030 is used in the biosynthesis of glucosinolates, a class of plant secondary metabolites, for conversion to oxime followed by addition of thio-glucose moiety. Furthermore, the chain extension from 2-oxoadipate to 2-oxosuberate is followed by coenzyme B biosynthesis in methonogenic archaea.
Class
Pathway map
rphi01210  2-Oxocarboxylic acid metabolism
rphi01210

Module
rphi_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rphi01210]
rphi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rphi01210]
rphi_M00032  Lysine degradation, lysine => saccharopine => acetoacetyl-CoA [PATH:rphi01210]
Organism
Ruditapes philippinarum (Manila clam) [GN:rphi]
Related
pathway
rphi00020  Citrate cycle (TCA cycle)
rphi00220  Arginine biosynthesis
rphi00250  Alanine, aspartate and glutamate metabolism
rphi00260  Glycine, serine and threonine metabolism
rphi00270  Cysteine and methionine metabolism
rphi00290  Valine, leucine and isoleucine biosynthesis
rphi00300  Lysine biosynthesis
rphi00310  Lysine degradation
rphi00620  Pyruvate metabolism
rphi00640  Propanoate metabolism
KO pathway
ko01210   
LinkDB

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