PATHWAY: rpop01100 Help Entry rpop01100                   Pathway                                 Name Metabolic pathways - Roseibium porphyridii Class BRITE hierarchy Pathway map rpop01100   Metabolic pathways Module rpop_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rpop01100] rpop_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rpop01100] rpop_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rpop01100] rpop_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rpop01100] rpop_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rpop01100] rpop_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rpop01100] rpop_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rpop01100] rpop_M00015   Proline biosynthesis, glutamate => proline [PATH:rpop01100] rpop_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rpop01100] rpop_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:rpop01100] rpop_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rpop01100] rpop_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rpop01100] rpop_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rpop01100] rpop_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rpop01100] rpop_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rpop01100] rpop_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:rpop01100] rpop_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rpop01100] rpop_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:rpop01100] rpop_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rpop01100] rpop_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rpop01100] rpop_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:rpop01100] rpop_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rpop01100] rpop_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rpop01100] rpop_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rpop01100] rpop_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rpop01100] rpop_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:rpop01100] rpop_M00082   Fatty acid biosynthesis, initiation [PATH:rpop01100] rpop_M00083   Fatty acid biosynthesis, elongation [PATH:rpop01100] rpop_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rpop01100] rpop_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:rpop01100] rpop_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rpop01100] rpop_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rpop01100] rpop_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:rpop01100] rpop_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rpop01100] rpop_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:rpop01100] rpop_M00140   C1-unit interconversion, prokaryotes [PATH:rpop01100] rpop_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rpop01100] rpop_M00149   Succinate dehydrogenase, prokaryotes [PATH:rpop01100] rpop_M00151   Cytochrome bc1 complex respiratory unit [PATH:rpop01100] rpop_M00155   Cytochrome c oxidase, prokaryotes [PATH:rpop01100] rpop_M00156   Cytochrome c oxidase, cbb3-type [PATH:rpop01100] rpop_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rpop01100] rpop_M00169   CAM (Crassulacean acid metabolism), light [PATH:rpop01100] rpop_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rpop01100] rpop_M00417   Cytochrome o ubiquinol oxidase [PATH:rpop01100] rpop_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rpop01100] rpop_M00529   Denitrification, nitrate => nitrogen [PATH:rpop01100] rpop_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:rpop01100] rpop_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rpop01100] rpop_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:rpop01100] rpop_M00555   Betaine biosynthesis, choline => betaine [PATH:rpop01100] rpop_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rpop01100] rpop_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:rpop01100] rpop_M00621   Glycine cleavage system [PATH:rpop01100] rpop_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rpop01100] rpop_M00793   dTDP-L-rhamnose biosynthesis [PATH:rpop01100] rpop_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rpop01100] rpop_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rpop01100] rpop_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rpop01100] rpop_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rpop01100] rpop_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:rpop01100] rpop_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rpop01100] rpop_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:rpop01100] rpop_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rpop01100] rpop_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rpop01100] rpop_M00970   Proline degradation, proline => glutamate [PATH:rpop01100] Organism Roseibium porphyridii [GN:rpop] Related pathway rpop00010   Glycolysis / Gluconeogenesis rpop00020   Citrate cycle (TCA cycle) rpop00030   Pentose phosphate pathway rpop00040   Pentose and glucuronate interconversions rpop00051   Fructose and mannose metabolism rpop00052   Galactose metabolism rpop00053   Ascorbate and aldarate metabolism rpop00061   Fatty acid biosynthesis rpop00071   Fatty acid degradation rpop00130   Ubiquinone and other terpenoid-quinone biosynthesis rpop00190   Oxidative phosphorylation rpop00220   Arginine biosynthesis rpop00230   Purine metabolism rpop00240   Pyrimidine metabolism rpop00250   Alanine, aspartate and glutamate metabolism rpop00260   Glycine, serine and threonine metabolism rpop00261   Monobactam biosynthesis rpop00270   Cysteine and methionine metabolism rpop00280   Valine, leucine and isoleucine degradation rpop00290   Valine, leucine and isoleucine biosynthesis rpop00300   Lysine biosynthesis rpop00310   Lysine degradation rpop00330   Arginine and proline metabolism rpop00332   Carbapenem biosynthesis rpop00340   Histidine metabolism rpop00350   Tyrosine metabolism rpop00360   Phenylalanine metabolism rpop00361   Chlorocyclohexane and chlorobenzene degradation rpop00362   Benzoate degradation rpop00364   Fluorobenzoate degradation rpop00380   Tryptophan metabolism rpop00400   Phenylalanine, tyrosine and tryptophan biosynthesis rpop00401   Novobiocin biosynthesis rpop00410   beta-Alanine metabolism rpop00430   Taurine and hypotaurine metabolism rpop00440   Phosphonate and phosphinate metabolism rpop00450   Selenocompound metabolism rpop00460   Cyanoamino acid metabolism rpop00470   D-Amino acid metabolism rpop00480   Glutathione metabolism rpop00500   Starch and sucrose metabolism rpop00511   Other glycan degradation rpop00520   Amino sugar and nucleotide sugar metabolism rpop00521   Streptomycin biosynthesis rpop00523   Polyketide sugar unit biosynthesis rpop00525   Acarbose and validamycin biosynthesis rpop00540   Lipopolysaccharide biosynthesis rpop00541   O-Antigen nucleotide sugar biosynthesis rpop00543   Exopolysaccharide biosynthesis rpop00550   Peptidoglycan biosynthesis rpop00552   Teichoic acid biosynthesis rpop00561   Glycerolipid metabolism rpop00562   Inositol phosphate metabolism rpop00564   Glycerophospholipid metabolism rpop00600   Sphingolipid metabolism rpop00620   Pyruvate metabolism rpop00621   Dioxin degradation rpop00622   Xylene degradation rpop00623   Toluene degradation rpop00625   Chloroalkane and chloroalkene degradation rpop00626   Naphthalene degradation rpop00627   Aminobenzoate degradation rpop00630   Glyoxylate and dicarboxylate metabolism rpop00633   Nitrotoluene degradation rpop00640   Propanoate metabolism rpop00643   Styrene degradation rpop00650   Butanoate metabolism rpop00660   C5-Branched dibasic acid metabolism rpop00670   One carbon pool by folate rpop00680   Methane metabolism rpop00710   Carbon fixation by Calvin cycle rpop00720   Other carbon fixation pathways rpop00730   Thiamine metabolism rpop00740   Riboflavin metabolism rpop00750   Vitamin B6 metabolism rpop00760   Nicotinate and nicotinamide metabolism rpop00770   Pantothenate and CoA biosynthesis rpop00780   Biotin metabolism rpop00785   Lipoic acid metabolism rpop00790   Folate biosynthesis rpop00791   Atrazine degradation rpop00860   Porphyrin metabolism rpop00900   Terpenoid backbone biosynthesis rpop00903   Limonene degradation rpop00906   Carotenoid biosynthesis rpop00907   Pinene, camphor and geraniol degradation rpop00910   Nitrogen metabolism rpop00920   Sulfur metabolism rpop00930   Caprolactam degradation rpop00946   Degradation of flavonoids rpop00999   Biosynthesis of various plant secondary metabolites rpop01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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