PATHWAY: rrz01100 Help Entry rrz01100                    Pathway                                 Name Metabolic pathways - Rhodococcus ruber Class BRITE hierarchy Pathway map rrz01100   Metabolic pathways Module rrz_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rrz01100] rrz_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rrz01100] rrz_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rrz01100] rrz_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rrz01100] rrz_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rrz01100] rrz_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rrz01100] rrz_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rrz01100] rrz_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rrz01100] rrz_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rrz01100] rrz_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rrz01100] rrz_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rrz01100] rrz_M00015   Proline biosynthesis, glutamate => proline [PATH:rrz01100] rrz_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rrz01100] rrz_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:rrz01100] rrz_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rrz01100] rrz_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rrz01100] rrz_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rrz01100] rrz_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rrz01100] rrz_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rrz01100] rrz_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:rrz01100] rrz_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rrz01100] rrz_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:rrz01100] rrz_M00035   Methionine degradation [PATH:rrz01100] rrz_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:rrz01100] rrz_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rrz01100] rrz_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rrz01100] rrz_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rrz01100] rrz_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rrz01100] rrz_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rrz01100] rrz_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rrz01100] rrz_M00082   Fatty acid biosynthesis, initiation [PATH:rrz01100] rrz_M00083   Fatty acid biosynthesis, elongation [PATH:rrz01100] rrz_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rrz01100] rrz_M00087   beta-Oxidation [PATH:rrz01100] rrz_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rrz01100] rrz_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:rrz01100] rrz_M00098   Acylglycerol degradation [PATH:rrz01100] rrz_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rrz01100] rrz_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:rrz01100] rrz_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:rrz01100] rrz_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:rrz01100] rrz_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rrz01100] rrz_M00149   Succinate dehydrogenase, prokaryotes [PATH:rrz01100] rrz_M00151   Cytochrome bc1 complex respiratory unit [PATH:rrz01100] rrz_M00155   Cytochrome c oxidase, prokaryotes [PATH:rrz01100] rrz_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rrz01100] rrz_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:rrz01100] rrz_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rrz01100] rrz_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:rrz01100] rrz_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:rrz01100] rrz_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rrz01100] rrz_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:rrz01100] rrz_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rrz01100] rrz_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:rrz01100] rrz_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:rrz01100] rrz_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:rrz01100] rrz_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rrz01100] rrz_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rrz01100] rrz_M00621   Glycine cleavage system [PATH:rrz01100] rrz_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:rrz01100] rrz_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rrz01100] rrz_M00793   dTDP-L-rhamnose biosynthesis [PATH:rrz01100] rrz_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rrz01100] rrz_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:rrz01100] rrz_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rrz01100] rrz_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rrz01100] rrz_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:rrz01100] rrz_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rrz01100] rrz_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:rrz01100] rrz_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:rrz01100] rrz_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rrz01100] rrz_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rrz01100] rrz_M00970   Proline degradation, proline => glutamate [PATH:rrz01100] Organism Rhodococcus ruber [GN:rrz] Related pathway rrz00010   Glycolysis / Gluconeogenesis rrz00020   Citrate cycle (TCA cycle) rrz00030   Pentose phosphate pathway rrz00040   Pentose and glucuronate interconversions rrz00051   Fructose and mannose metabolism rrz00052   Galactose metabolism rrz00053   Ascorbate and aldarate metabolism rrz00061   Fatty acid biosynthesis rrz00062   Fatty acid elongation rrz00071   Fatty acid degradation rrz00100   Steroid biosynthesis rrz00130   Ubiquinone and other terpenoid-quinone biosynthesis rrz00190   Oxidative phosphorylation rrz00220   Arginine biosynthesis rrz00230   Purine metabolism rrz00240   Pyrimidine metabolism rrz00250   Alanine, aspartate and glutamate metabolism rrz00260   Glycine, serine and threonine metabolism rrz00261   Monobactam biosynthesis rrz00270   Cysteine and methionine metabolism rrz00280   Valine, leucine and isoleucine degradation rrz00290   Valine, leucine and isoleucine biosynthesis rrz00300   Lysine biosynthesis rrz00310   Lysine degradation rrz00330   Arginine and proline metabolism rrz00332   Carbapenem biosynthesis rrz00340   Histidine metabolism rrz00350   Tyrosine metabolism rrz00360   Phenylalanine metabolism rrz00361   Chlorocyclohexane and chlorobenzene degradation rrz00362   Benzoate degradation rrz00364   Fluorobenzoate degradation rrz00380   Tryptophan metabolism rrz00400   Phenylalanine, tyrosine and tryptophan biosynthesis rrz00401   Novobiocin biosynthesis rrz00410   beta-Alanine metabolism rrz00430   Taurine and hypotaurine metabolism rrz00450   Selenocompound metabolism rrz00460   Cyanoamino acid metabolism rrz00470   D-Amino acid metabolism rrz00480   Glutathione metabolism rrz00500   Starch and sucrose metabolism rrz00514   Other types of O-glycan biosynthesis rrz00515   Mannose type O-glycan biosynthesis rrz00520   Amino sugar and nucleotide sugar metabolism rrz00521   Streptomycin biosynthesis rrz00523   Polyketide sugar unit biosynthesis rrz00525   Acarbose and validamycin biosynthesis rrz00541   O-Antigen nucleotide sugar biosynthesis rrz00542   O-Antigen repeat unit biosynthesis rrz00543   Exopolysaccharide biosynthesis rrz00550   Peptidoglycan biosynthesis rrz00552   Teichoic acid biosynthesis rrz00561   Glycerolipid metabolism rrz00562   Inositol phosphate metabolism rrz00564   Glycerophospholipid metabolism rrz00592   alpha-Linolenic acid metabolism rrz00620   Pyruvate metabolism rrz00621   Dioxin degradation rrz00622   Xylene degradation rrz00623   Toluene degradation rrz00625   Chloroalkane and chloroalkene degradation rrz00626   Naphthalene degradation rrz00627   Aminobenzoate degradation rrz00630   Glyoxylate and dicarboxylate metabolism rrz00633   Nitrotoluene degradation rrz00640   Propanoate metabolism rrz00643   Styrene degradation rrz00650   Butanoate metabolism rrz00660   C5-Branched dibasic acid metabolism rrz00670   One carbon pool by folate rrz00680   Methane metabolism rrz00710   Carbon fixation by Calvin cycle rrz00720   Other carbon fixation pathways rrz00730   Thiamine metabolism rrz00740   Riboflavin metabolism rrz00750   Vitamin B6 metabolism rrz00760   Nicotinate and nicotinamide metabolism rrz00770   Pantothenate and CoA biosynthesis rrz00780   Biotin metabolism rrz00785   Lipoic acid metabolism rrz00790   Folate biosynthesis rrz00791   Atrazine degradation rrz00860   Porphyrin metabolism rrz00900   Terpenoid backbone biosynthesis rrz00903   Limonene degradation rrz00906   Carotenoid biosynthesis rrz00907   Pinene, camphor and geraniol degradation rrz00910   Nitrogen metabolism rrz00920   Sulfur metabolism rrz00930   Caprolactam degradation rrz00946   Degradation of flavonoids rrz00984   Steroid degradation rrz00999   Biosynthesis of various plant secondary metabolites rrz01040   Biosynthesis of unsaturated fatty acids rrz01053   Biosynthesis of siderophore group nonribosomal peptides rrz01057   Biosynthesis of type II polyketide products KO pathway ko01100     LinkDB All DBs

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