KEGG   PATHWAY: rth01100
Entry
rth01100                    Pathway                                
Name
Metabolic pathways - Rhodanobacter thiooxydans
Class
Pathway map
rth01100  Metabolic pathways
rth01100

Module
rth_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rth01100]
rth_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rth01100]
rth_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rth01100]
rth_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rth01100]
rth_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rth01100]
rth_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rth01100]
rth_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rth01100]
rth_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rth01100]
rth_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:rth01100]
rth_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rth01100]
rth_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rth01100]
rth_M00012  Glyoxylate cycle [PATH:rth01100]
rth_M00015  Proline biosynthesis, glutamate => proline [PATH:rth01100]
rth_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rth01100]
rth_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rth01100]
rth_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rth01100]
rth_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rth01100]
rth_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:rth01100]
rth_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:rth01100]
rth_M00026  Histidine biosynthesis, PRPP => histidine [PATH:rth01100]
rth_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:rth01100]
rth_M00034  Methionine salvage pathway [PATH:rth01100]
rth_M00035  Methionine degradation [PATH:rth01100]
rth_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:rth01100]
rth_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:rth01100]
rth_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rth01100]
rth_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rth01100]
rth_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rth01100]
rth_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rth01100]
rth_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rth01100]
rth_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rth01100]
rth_M00063  CMP-KDO biosynthesis [PATH:rth01100]
rth_M00082  Fatty acid biosynthesis, initiation [PATH:rth01100]
rth_M00083  Fatty acid biosynthesis, elongation [PATH:rth01100]
rth_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:rth01100]
rth_M00087  beta-Oxidation [PATH:rth01100]
rth_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rth01100]
rth_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:rth01100]
rth_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rth01100]
rth_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:rth01100]
rth_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:rth01100]
rth_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:rth01100]
rth_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:rth01100]
rth_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:rth01100]
rth_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:rth01100]
rth_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:rth01100]
rth_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:rth01100]
rth_M00149  Succinate dehydrogenase, prokaryotes [PATH:rth01100]
rth_M00151  Cytochrome bc1 complex respiratory unit [PATH:rth01100]
rth_M00155  Cytochrome c oxidase, prokaryotes [PATH:rth01100]
rth_M00156  Cytochrome c oxidase, cbb3-type [PATH:rth01100]
rth_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:rth01100]
rth_M00168  CAM (Crassulacean acid metabolism), dark [PATH:rth01100]
rth_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:rth01100]
rth_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rth01100]
rth_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:rth01100]
rth_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:rth01100]
rth_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rth01100]
rth_M00548  Benzene degradation, benzene => catechol [PATH:rth01100]
rth_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rth01100]
rth_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:rth01100]
rth_M00569  Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA [PATH:rth01100]
rth_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rth01100]
rth_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rth01100]
rth_M00621  Glycine cleavage system [PATH:rth01100]
rth_M00793  dTDP-L-rhamnose biosynthesis [PATH:rth01100]
rth_M00845  Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:rth01100]
rth_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:rth01100]
rth_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rth01100]
rth_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rth01100]
rth_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rth01100]
rth_M00970  Proline degradation, proline => glutamate [PATH:rth01100]
Organism
Rhodanobacter thiooxydans [GN:rth]
Related
pathway
rth00010  Glycolysis / Gluconeogenesis
rth00020  Citrate cycle (TCA cycle)
rth00030  Pentose phosphate pathway
rth00040  Pentose and glucuronate interconversions
rth00051  Fructose and mannose metabolism
rth00052  Galactose metabolism
rth00053  Ascorbate and aldarate metabolism
rth00061  Fatty acid biosynthesis
rth00071  Fatty acid degradation
rth00130  Ubiquinone and other terpenoid-quinone biosynthesis
rth00190  Oxidative phosphorylation
rth00220  Arginine biosynthesis
rth00230  Purine metabolism
rth00240  Pyrimidine metabolism
rth00250  Alanine, aspartate and glutamate metabolism
rth00260  Glycine, serine and threonine metabolism
rth00261  Monobactam biosynthesis
rth00270  Cysteine and methionine metabolism
rth00280  Valine, leucine and isoleucine degradation
rth00290  Valine, leucine and isoleucine biosynthesis
rth00300  Lysine biosynthesis
rth00310  Lysine degradation
rth00330  Arginine and proline metabolism
rth00332  Carbapenem biosynthesis
rth00340  Histidine metabolism
rth00350  Tyrosine metabolism
rth00360  Phenylalanine metabolism
rth00361  Chlorocyclohexane and chlorobenzene degradation
rth00362  Benzoate degradation
rth00364  Fluorobenzoate degradation
rth00380  Tryptophan metabolism
rth00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rth00401  Novobiocin biosynthesis
rth00410  beta-Alanine metabolism
rth00430  Taurine and hypotaurine metabolism
rth00450  Selenocompound metabolism
rth00460  Cyanoamino acid metabolism
rth00470  D-Amino acid metabolism
rth00480  Glutathione metabolism
rth00500  Starch and sucrose metabolism
rth00511  Other glycan degradation
rth00520  Amino sugar and nucleotide sugar metabolism
rth00521  Streptomycin biosynthesis
rth00523  Polyketide sugar unit biosynthesis
rth00525  Acarbose and validamycin biosynthesis
rth00540  Lipopolysaccharide biosynthesis
rth00541  O-Antigen nucleotide sugar biosynthesis
rth00550  Peptidoglycan biosynthesis
rth00552  Teichoic acid biosynthesis
rth00561  Glycerolipid metabolism
rth00562  Inositol phosphate metabolism
rth00564  Glycerophospholipid metabolism
rth00565  Ether lipid metabolism
rth00590  Arachidonic acid metabolism
rth00592  alpha-Linolenic acid metabolism
rth00600  Sphingolipid metabolism
rth00620  Pyruvate metabolism
rth00621  Dioxin degradation
rth00622  Xylene degradation
rth00623  Toluene degradation
rth00625  Chloroalkane and chloroalkene degradation
rth00626  Naphthalene degradation
rth00630  Glyoxylate and dicarboxylate metabolism
rth00640  Propanoate metabolism
rth00643  Styrene degradation
rth00650  Butanoate metabolism
rth00660  C5-Branched dibasic acid metabolism
rth00670  One carbon pool by folate
rth00680  Methane metabolism
rth00710  Carbon fixation by Calvin cycle
rth00720  Other carbon fixation pathways
rth00730  Thiamine metabolism
rth00740  Riboflavin metabolism
rth00750  Vitamin B6 metabolism
rth00760  Nicotinate and nicotinamide metabolism
rth00770  Pantothenate and CoA biosynthesis
rth00780  Biotin metabolism
rth00785  Lipoic acid metabolism
rth00790  Folate biosynthesis
rth00860  Porphyrin metabolism
rth00900  Terpenoid backbone biosynthesis
rth00906  Carotenoid biosynthesis
rth00907  Pinene, camphor and geraniol degradation
rth00910  Nitrogen metabolism
rth00920  Sulfur metabolism
rth00930  Caprolactam degradation
rth00946  Degradation of flavonoids
rth00999  Biosynthesis of various plant secondary metabolites
rth01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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