PATHWAY: rtu01100 Help Entry rtu01100                    Pathway                                 Name Metabolic pathways - Rhizobium tumorigenes Class BRITE hierarchy Pathway map rtu01100   Metabolic pathways Module rtu_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rtu01100] rtu_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rtu01100] rtu_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rtu01100] rtu_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rtu01100] rtu_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rtu01100] rtu_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rtu01100] rtu_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rtu01100] rtu_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rtu01100] rtu_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rtu01100] rtu_M00015   Proline biosynthesis, glutamate => proline [PATH:rtu01100] rtu_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rtu01100] rtu_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rtu01100] rtu_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rtu01100] rtu_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:rtu01100] rtu_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rtu01100] rtu_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:rtu01100] rtu_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:rtu01100] rtu_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rtu01100] rtu_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rtu01100] rtu_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rtu01100] rtu_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:rtu01100] rtu_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rtu01100] rtu_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rtu01100] rtu_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rtu01100] rtu_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rtu01100] rtu_M00082   Fatty acid biosynthesis, initiation [PATH:rtu01100] rtu_M00083   Fatty acid biosynthesis, elongation [PATH:rtu01100] rtu_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rtu01100] rtu_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:rtu01100] rtu_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rtu01100] rtu_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:rtu01100] rtu_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:rtu01100] rtu_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rtu01100] rtu_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:rtu01100] rtu_M00140   C1-unit interconversion, prokaryotes [PATH:rtu01100] rtu_M00149   Succinate dehydrogenase, prokaryotes [PATH:rtu01100] rtu_M00151   Cytochrome bc1 complex respiratory unit [PATH:rtu01100] rtu_M00155   Cytochrome c oxidase, prokaryotes [PATH:rtu01100] rtu_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rtu01100] rtu_M00169   CAM (Crassulacean acid metabolism), light [PATH:rtu01100] rtu_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rtu01100] rtu_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:rtu01100] rtu_M00417   Cytochrome o ubiquinol oxidase [PATH:rtu01100] rtu_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rtu01100] rtu_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rtu01100] rtu_M00555   Betaine biosynthesis, choline => betaine [PATH:rtu01100] rtu_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rtu01100] rtu_M00621   Glycine cleavage system [PATH:rtu01100] rtu_M00622   Nicotinate degradation, nicotinate => fumarate [PATH:rtu01100] rtu_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rtu01100] rtu_M00793   dTDP-L-rhamnose biosynthesis [PATH:rtu01100] rtu_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rtu01100] rtu_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rtu01100] rtu_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:rtu01100] rtu_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:rtu01100] rtu_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rtu01100] rtu_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rtu01100] rtu_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:rtu01100] rtu_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:rtu01100] rtu_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rtu01100] rtu_M00970   Proline degradation, proline => glutamate [PATH:rtu01100] rtu_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:rtu01100] Organism Rhizobium tumorigenes [GN:rtu] Related pathway rtu00010   Glycolysis / Gluconeogenesis rtu00020   Citrate cycle (TCA cycle) rtu00030   Pentose phosphate pathway rtu00040   Pentose and glucuronate interconversions rtu00051   Fructose and mannose metabolism rtu00052   Galactose metabolism rtu00053   Ascorbate and aldarate metabolism rtu00061   Fatty acid biosynthesis rtu00071   Fatty acid degradation rtu00074   Mycolic acid biosynthesis rtu00130   Ubiquinone and other terpenoid-quinone biosynthesis rtu00190   Oxidative phosphorylation rtu00220   Arginine biosynthesis rtu00230   Purine metabolism rtu00240   Pyrimidine metabolism rtu00250   Alanine, aspartate and glutamate metabolism rtu00260   Glycine, serine and threonine metabolism rtu00261   Monobactam biosynthesis rtu00270   Cysteine and methionine metabolism rtu00280   Valine, leucine and isoleucine degradation rtu00290   Valine, leucine and isoleucine biosynthesis rtu00300   Lysine biosynthesis rtu00310   Lysine degradation rtu00311   Penicillin and cephalosporin biosynthesis rtu00330   Arginine and proline metabolism rtu00332   Carbapenem biosynthesis rtu00340   Histidine metabolism rtu00350   Tyrosine metabolism rtu00360   Phenylalanine metabolism rtu00361   Chlorocyclohexane and chlorobenzene degradation rtu00362   Benzoate degradation rtu00364   Fluorobenzoate degradation rtu00380   Tryptophan metabolism rtu00400   Phenylalanine, tyrosine and tryptophan biosynthesis rtu00401   Novobiocin biosynthesis rtu00410   beta-Alanine metabolism rtu00430   Taurine and hypotaurine metabolism rtu00440   Phosphonate and phosphinate metabolism rtu00450   Selenocompound metabolism rtu00460   Cyanoamino acid metabolism rtu00470   D-Amino acid metabolism rtu00480   Glutathione metabolism rtu00500   Starch and sucrose metabolism rtu00511   Other glycan degradation rtu00520   Amino sugar and nucleotide sugar metabolism rtu00521   Streptomycin biosynthesis rtu00523   Polyketide sugar unit biosynthesis rtu00525   Acarbose and validamycin biosynthesis rtu00540   Lipopolysaccharide biosynthesis rtu00541   O-Antigen nucleotide sugar biosynthesis rtu00543   Exopolysaccharide biosynthesis rtu00550   Peptidoglycan biosynthesis rtu00552   Teichoic acid biosynthesis rtu00561   Glycerolipid metabolism rtu00562   Inositol phosphate metabolism rtu00564   Glycerophospholipid metabolism rtu00600   Sphingolipid metabolism rtu00620   Pyruvate metabolism rtu00622   Xylene degradation rtu00623   Toluene degradation rtu00625   Chloroalkane and chloroalkene degradation rtu00626   Naphthalene degradation rtu00627   Aminobenzoate degradation rtu00630   Glyoxylate and dicarboxylate metabolism rtu00633   Nitrotoluene degradation rtu00640   Propanoate metabolism rtu00650   Butanoate metabolism rtu00660   C5-Branched dibasic acid metabolism rtu00670   One carbon pool by folate rtu00680   Methane metabolism rtu00710   Carbon fixation by Calvin cycle rtu00720   Other carbon fixation pathways rtu00730   Thiamine metabolism rtu00740   Riboflavin metabolism rtu00750   Vitamin B6 metabolism rtu00760   Nicotinate and nicotinamide metabolism rtu00770   Pantothenate and CoA biosynthesis rtu00780   Biotin metabolism rtu00785   Lipoic acid metabolism rtu00790   Folate biosynthesis rtu00791   Atrazine degradation rtu00860   Porphyrin metabolism rtu00900   Terpenoid backbone biosynthesis rtu00903   Limonene degradation rtu00906   Carotenoid biosynthesis rtu00907   Pinene, camphor and geraniol degradation rtu00910   Nitrogen metabolism rtu00920   Sulfur metabolism rtu00930   Caprolactam degradation rtu00946   Degradation of flavonoids rtu00999   Biosynthesis of various plant secondary metabolites rtu01040   Biosynthesis of unsaturated fatty acids rtu01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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