KEGG   PATHWAY: rtx01100
Entry
rtx01100                    Pathway                                
Name
Metabolic pathways - Rathayibacter toxicus 70137
Class
Pathway map
rtx01100  Metabolic pathways
rtx01100

Module
rtx_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rtx01100]
rtx_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rtx01100]
rtx_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rtx01100]
rtx_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rtx01100]
rtx_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rtx01100]
rtx_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rtx01100]
rtx_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rtx01100]
rtx_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:rtx01100]
rtx_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rtx01100]
rtx_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rtx01100]
rtx_M00015  Proline biosynthesis, glutamate => proline [PATH:rtx01100]
rtx_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:rtx01100]
rtx_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rtx01100]
rtx_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rtx01100]
rtx_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:rtx01100]
rtx_M00026  Histidine biosynthesis, PRPP => histidine [PATH:rtx01100]
rtx_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rtx01100]
rtx_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rtx01100]
rtx_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rtx01100]
rtx_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rtx01100]
rtx_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:rtx01100]
rtx_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:rtx01100]
rtx_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:rtx01100]
rtx_M00149  Succinate dehydrogenase, prokaryotes [PATH:rtx01100]
rtx_M00151  Cytochrome bc1 complex respiratory unit [PATH:rtx01100]
rtx_M00155  Cytochrome c oxidase, prokaryotes [PATH:rtx01100]
rtx_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:rtx01100]
rtx_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rtx01100]
rtx_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:rtx01100]
rtx_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rtx01100]
rtx_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:rtx01100]
rtx_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rtx01100]
rtx_M00621  Glycine cleavage system [PATH:rtx01100]
rtx_M00793  dTDP-L-rhamnose biosynthesis [PATH:rtx01100]
rtx_M00844  Arginine biosynthesis, ornithine => arginine [PATH:rtx01100]
rtx_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rtx01100]
rtx_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:rtx01100]
rtx_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:rtx01100]
rtx_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:rtx01100]
rtx_M00970  Proline degradation, proline => glutamate [PATH:rtx01100]
Organism
Rathayibacter toxicus 70137 [GN:rtx]
Related
pathway
rtx00010  Glycolysis / Gluconeogenesis
rtx00020  Citrate cycle (TCA cycle)
rtx00030  Pentose phosphate pathway
rtx00040  Pentose and glucuronate interconversions
rtx00051  Fructose and mannose metabolism
rtx00052  Galactose metabolism
rtx00053  Ascorbate and aldarate metabolism
rtx00061  Fatty acid biosynthesis
rtx00071  Fatty acid degradation
rtx00130  Ubiquinone and other terpenoid-quinone biosynthesis
rtx00190  Oxidative phosphorylation
rtx00220  Arginine biosynthesis
rtx00230  Purine metabolism
rtx00240  Pyrimidine metabolism
rtx00250  Alanine, aspartate and glutamate metabolism
rtx00260  Glycine, serine and threonine metabolism
rtx00261  Monobactam biosynthesis
rtx00270  Cysteine and methionine metabolism
rtx00280  Valine, leucine and isoleucine degradation
rtx00290  Valine, leucine and isoleucine biosynthesis
rtx00300  Lysine biosynthesis
rtx00310  Lysine degradation
rtx00330  Arginine and proline metabolism
rtx00332  Carbapenem biosynthesis
rtx00340  Histidine metabolism
rtx00350  Tyrosine metabolism
rtx00360  Phenylalanine metabolism
rtx00362  Benzoate degradation
rtx00380  Tryptophan metabolism
rtx00400  Phenylalanine, tyrosine and tryptophan biosynthesis
rtx00401  Novobiocin biosynthesis
rtx00410  beta-Alanine metabolism
rtx00430  Taurine and hypotaurine metabolism
rtx00440  Phosphonate and phosphinate metabolism
rtx00450  Selenocompound metabolism
rtx00460  Cyanoamino acid metabolism
rtx00470  D-Amino acid metabolism
rtx00480  Glutathione metabolism
rtx00500  Starch and sucrose metabolism
rtx00511  Other glycan degradation
rtx00520  Amino sugar and nucleotide sugar metabolism
rtx00521  Streptomycin biosynthesis
rtx00523  Polyketide sugar unit biosynthesis
rtx00525  Acarbose and validamycin biosynthesis
rtx00540  Lipopolysaccharide biosynthesis
rtx00541  O-Antigen nucleotide sugar biosynthesis
rtx00542  O-Antigen repeat unit biosynthesis
rtx00543  Exopolysaccharide biosynthesis
rtx00550  Peptidoglycan biosynthesis
rtx00552  Teichoic acid biosynthesis
rtx00561  Glycerolipid metabolism
rtx00562  Inositol phosphate metabolism
rtx00564  Glycerophospholipid metabolism
rtx00592  alpha-Linolenic acid metabolism
rtx00620  Pyruvate metabolism
rtx00630  Glyoxylate and dicarboxylate metabolism
rtx00640  Propanoate metabolism
rtx00643  Styrene degradation
rtx00650  Butanoate metabolism
rtx00660  C5-Branched dibasic acid metabolism
rtx00670  One carbon pool by folate
rtx00680  Methane metabolism
rtx00710  Carbon fixation by Calvin cycle
rtx00720  Other carbon fixation pathways
rtx00730  Thiamine metabolism
rtx00740  Riboflavin metabolism
rtx00750  Vitamin B6 metabolism
rtx00760  Nicotinate and nicotinamide metabolism
rtx00770  Pantothenate and CoA biosynthesis
rtx00780  Biotin metabolism
rtx00785  Lipoic acid metabolism
rtx00790  Folate biosynthesis
rtx00860  Porphyrin metabolism
rtx00900  Terpenoid backbone biosynthesis
rtx00907  Pinene, camphor and geraniol degradation
rtx00910  Nitrogen metabolism
rtx00920  Sulfur metabolism
rtx00946  Degradation of flavonoids
rtx00998  Biosynthesis of various antibiotics
rtx00999  Biosynthesis of various plant secondary metabolites
KO pathway
ko01100   
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