PATHWAY: rud01100 Help Entry rud01100                    Pathway                                 Name Metabolic pathways - Rufibacter sp. DG15C Class BRITE hierarchy Pathway map rud01100   Metabolic pathways Module rud_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rud01100] rud_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rud01100] rud_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:rud01100] rud_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rud01100] rud_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rud01100] rud_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rud01100] rud_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rud01100] rud_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rud01100] rud_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rud01100] rud_M00026   Histidine biosynthesis, PRPP => histidine [PATH:rud01100] rud_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:rud01100] rud_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rud01100] rud_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rud01100] rud_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rud01100] rud_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rud01100] rud_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rud01100] rud_M00063   CMP-KDO biosynthesis [PATH:rud01100] rud_M00083   Fatty acid biosynthesis, elongation [PATH:rud01100] rud_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:rud01100] rud_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rud01100] rud_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:rud01100] rud_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:rud01100] rud_M00155   Cytochrome c oxidase, prokaryotes [PATH:rud01100] rud_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rud01100] rud_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rud01100] rud_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:rud01100] rud_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:rud01100] rud_M00621   Glycine cleavage system [PATH:rud01100] rud_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:rud01100] rud_M00793   dTDP-L-rhamnose biosynthesis [PATH:rud01100] rud_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rud01100] rud_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:rud01100] rud_M00970   Proline degradation, proline => glutamate [PATH:rud01100] Organism Rufibacter sp. DG15C [GN:rud] Related pathway rud00010   Glycolysis / Gluconeogenesis rud00020   Citrate cycle (TCA cycle) rud00030   Pentose phosphate pathway rud00040   Pentose and glucuronate interconversions rud00051   Fructose and mannose metabolism rud00052   Galactose metabolism rud00053   Ascorbate and aldarate metabolism rud00061   Fatty acid biosynthesis rud00071   Fatty acid degradation rud00074   Mycolic acid biosynthesis rud00130   Ubiquinone and other terpenoid-quinone biosynthesis rud00190   Oxidative phosphorylation rud00220   Arginine biosynthesis rud00230   Purine metabolism rud00240   Pyrimidine metabolism rud00250   Alanine, aspartate and glutamate metabolism rud00260   Glycine, serine and threonine metabolism rud00261   Monobactam biosynthesis rud00270   Cysteine and methionine metabolism rud00280   Valine, leucine and isoleucine degradation rud00290   Valine, leucine and isoleucine biosynthesis rud00300   Lysine biosynthesis rud00310   Lysine degradation rud00311   Penicillin and cephalosporin biosynthesis rud00330   Arginine and proline metabolism rud00340   Histidine metabolism rud00350   Tyrosine metabolism rud00360   Phenylalanine metabolism rud00361   Chlorocyclohexane and chlorobenzene degradation rud00362   Benzoate degradation rud00364   Fluorobenzoate degradation rud00380   Tryptophan metabolism rud00400   Phenylalanine, tyrosine and tryptophan biosynthesis rud00401   Novobiocin biosynthesis rud00405   Phenazine biosynthesis rud00410   beta-Alanine metabolism rud00430   Taurine and hypotaurine metabolism rud00450   Selenocompound metabolism rud00460   Cyanoamino acid metabolism rud00470   D-Amino acid metabolism rud00480   Glutathione metabolism rud00500   Starch and sucrose metabolism rud00511   Other glycan degradation rud00520   Amino sugar and nucleotide sugar metabolism rud00521   Streptomycin biosynthesis rud00523   Polyketide sugar unit biosynthesis rud00525   Acarbose and validamycin biosynthesis rud00540   Lipopolysaccharide biosynthesis rud00541   O-Antigen nucleotide sugar biosynthesis rud00542   O-Antigen repeat unit biosynthesis rud00543   Exopolysaccharide biosynthesis rud00550   Peptidoglycan biosynthesis rud00552   Teichoic acid biosynthesis rud00561   Glycerolipid metabolism rud00562   Inositol phosphate metabolism rud00564   Glycerophospholipid metabolism rud00592   alpha-Linolenic acid metabolism rud00600   Sphingolipid metabolism rud00620   Pyruvate metabolism rud00622   Xylene degradation rud00623   Toluene degradation rud00625   Chloroalkane and chloroalkene degradation rud00627   Aminobenzoate degradation rud00630   Glyoxylate and dicarboxylate metabolism rud00633   Nitrotoluene degradation rud00640   Propanoate metabolism rud00643   Styrene degradation rud00650   Butanoate metabolism rud00670   One carbon pool by folate rud00680   Methane metabolism rud00710   Carbon fixation by Calvin cycle rud00720   Other carbon fixation pathways rud00730   Thiamine metabolism rud00740   Riboflavin metabolism rud00750   Vitamin B6 metabolism rud00760   Nicotinate and nicotinamide metabolism rud00770   Pantothenate and CoA biosynthesis rud00780   Biotin metabolism rud00785   Lipoic acid metabolism rud00790   Folate biosynthesis rud00860   Porphyrin metabolism rud00900   Terpenoid backbone biosynthesis rud00906   Carotenoid biosynthesis rud00907   Pinene, camphor and geraniol degradation rud00910   Nitrogen metabolism rud00920   Sulfur metabolism rud00946   Degradation of flavonoids rud00999   Biosynthesis of various plant secondary metabolites rud01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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