PATHWAY: rufi01100 Help Entry rufi01100                   Pathway                                 Name Metabolic pathways - Ruficoccus sp. ZRK36 Class BRITE hierarchy Pathway map rufi01100   Metabolic pathways Module rufi_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rufi01100] rufi_M00002   Glycolysis, core module involving three-carbon compounds [PATH:rufi01100] rufi_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rufi01100] rufi_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:rufi01100] rufi_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rufi01100] rufi_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rufi01100] rufi_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:rufi01100] rufi_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rufi01100] rufi_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rufi01100] rufi_M00015   Proline biosynthesis, glutamate => proline [PATH:rufi01100] rufi_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:rufi01100] rufi_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:rufi01100] rufi_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:rufi01100] rufi_M00021   Cysteine biosynthesis, serine => cysteine [PATH:rufi01100] rufi_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:rufi01100] rufi_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:rufi01100] rufi_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:rufi01100] rufi_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:rufi01100] rufi_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:rufi01100] rufi_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rufi01100] rufi_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rufi01100] rufi_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:rufi01100] rufi_M00082   Fatty acid biosynthesis, initiation [PATH:rufi01100] rufi_M00083   Fatty acid biosynthesis, elongation [PATH:rufi01100] rufi_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:rufi01100] rufi_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:rufi01100] rufi_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:rufi01100] rufi_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:rufi01100] rufi_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:rufi01100] rufi_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:rufi01100] rufi_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:rufi01100] rufi_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:rufi01100] rufi_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:rufi01100] rufi_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:rufi01100] rufi_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rufi01100] rufi_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:rufi01100] rufi_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:rufi01100] rufi_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:rufi01100] rufi_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rufi01100] rufi_M00621   Glycine cleavage system [PATH:rufi01100] rufi_M00844   Arginine biosynthesis, ornithine => arginine [PATH:rufi01100] rufi_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:rufi01100] rufi_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:rufi01100] rufi_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:rufi01100] Organism Ruficoccus sp. ZRK36 [GN:rufi] Related pathway rufi00010   Glycolysis / Gluconeogenesis rufi00020   Citrate cycle (TCA cycle) rufi00030   Pentose phosphate pathway rufi00040   Pentose and glucuronate interconversions rufi00051   Fructose and mannose metabolism rufi00052   Galactose metabolism rufi00053   Ascorbate and aldarate metabolism rufi00061   Fatty acid biosynthesis rufi00121   Secondary bile acid biosynthesis rufi00130   Ubiquinone and other terpenoid-quinone biosynthesis rufi00190   Oxidative phosphorylation rufi00220   Arginine biosynthesis rufi00230   Purine metabolism rufi00240   Pyrimidine metabolism rufi00250   Alanine, aspartate and glutamate metabolism rufi00260   Glycine, serine and threonine metabolism rufi00261   Monobactam biosynthesis rufi00270   Cysteine and methionine metabolism rufi00280   Valine, leucine and isoleucine degradation rufi00290   Valine, leucine and isoleucine biosynthesis rufi00300   Lysine biosynthesis rufi00310   Lysine degradation rufi00311   Penicillin and cephalosporin biosynthesis rufi00330   Arginine and proline metabolism rufi00332   Carbapenem biosynthesis rufi00340   Histidine metabolism rufi00350   Tyrosine metabolism rufi00360   Phenylalanine metabolism rufi00362   Benzoate degradation rufi00380   Tryptophan metabolism rufi00400   Phenylalanine, tyrosine and tryptophan biosynthesis rufi00401   Novobiocin biosynthesis rufi00410   beta-Alanine metabolism rufi00430   Taurine and hypotaurine metabolism rufi00450   Selenocompound metabolism rufi00460   Cyanoamino acid metabolism rufi00470   D-Amino acid metabolism rufi00480   Glutathione metabolism rufi00500   Starch and sucrose metabolism rufi00511   Other glycan degradation rufi00520   Amino sugar and nucleotide sugar metabolism rufi00521   Streptomycin biosynthesis rufi00523   Polyketide sugar unit biosynthesis rufi00525   Acarbose and validamycin biosynthesis rufi00540   Lipopolysaccharide biosynthesis rufi00541   O-Antigen nucleotide sugar biosynthesis rufi00542   O-Antigen repeat unit biosynthesis rufi00543   Exopolysaccharide biosynthesis rufi00550   Peptidoglycan biosynthesis rufi00552   Teichoic acid biosynthesis rufi00561   Glycerolipid metabolism rufi00562   Inositol phosphate metabolism rufi00564   Glycerophospholipid metabolism rufi00600   Sphingolipid metabolism rufi00620   Pyruvate metabolism rufi00622   Xylene degradation rufi00630   Glyoxylate and dicarboxylate metabolism rufi00640   Propanoate metabolism rufi00650   Butanoate metabolism rufi00660   C5-Branched dibasic acid metabolism rufi00670   One carbon pool by folate rufi00680   Methane metabolism rufi00710   Carbon fixation by Calvin cycle rufi00720   Other carbon fixation pathways rufi00730   Thiamine metabolism rufi00740   Riboflavin metabolism rufi00750   Vitamin B6 metabolism rufi00760   Nicotinate and nicotinamide metabolism rufi00770   Pantothenate and CoA biosynthesis rufi00780   Biotin metabolism rufi00785   Lipoic acid metabolism rufi00790   Folate biosynthesis rufi00860   Porphyrin metabolism rufi00900   Terpenoid backbone biosynthesis rufi00907   Pinene, camphor and geraniol degradation rufi00909   Sesquiterpenoid and triterpenoid biosynthesis rufi00910   Nitrogen metabolism rufi00920   Sulfur metabolism rufi00946   Degradation of flavonoids rufi00999   Biosynthesis of various plant secondary metabolites rufi01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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