KEGG   PATHWAY: rufi01200
Entry
rufi01200                   Pathway                                
Name
Carbon metabolism - Ruficoccus sp. ZRK36
Description
Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains carbon utilization pathways of glycolysis (map00010), pentose phosphate pathway (map00030), and citrate cycle (map00020), and six known carbon fixation pathways (map00710 and map00720) as well as some pathways of methane metabolism (map00680). The six carbon fixation pathways are: (1) reductive pentose phosphate cycle (Calvin cycle) in plants and cyanobacteria that perform oxygenic photosynthesis, (2) reductive citrate cycle in photosynthetic green sulfur bacteria and some chemolithoautotrophs, (3) 3-hydroxypropionate bi-cycle in photosynthetic green nonsulfur bacteria, two variants of 4-hydroxybutyrate pathways in Crenarchaeota called (4) hydroxypropionate-hydroxybutyrate cycle and (5) dicarboxylate-hydroxybutyrate cycle, and (6) reductive acetyl-CoA pathway in methanogenic bacteria.
Class
Pathway map
rufi01200  Carbon metabolism
rufi01200

Module
rufi_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:rufi01200]
rufi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rufi01200]
rufi_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:rufi01200]
rufi_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rufi01200]
rufi_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:rufi01200]
rufi_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rufi01200]
rufi_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:rufi01200]
rufi_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rufi01200]
rufi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rufi01200]
rufi_M00021  Cysteine biosynthesis, serine => cysteine [PATH:rufi01200]
rufi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rufi01200]
rufi_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rufi01200]
rufi_M00621  Glycine cleavage system [PATH:rufi01200]
Organism
Ruficoccus sp. ZRK36 [GN:rufi]
KO pathway
ko01200   
LinkDB

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