PATHWAY: run01100 Help Entry run01100                    Pathway                                 Name Metabolic pathways - Runella rosea Class BRITE hierarchy Pathway map run01100   Metabolic pathways Module run_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:run01100] run_M00002   Glycolysis, core module involving three-carbon compounds [PATH:run01100] run_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:run01100] run_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:run01100] run_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:run01100] run_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:run01100] run_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:run01100] run_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:run01100] run_M00015   Proline biosynthesis, glutamate => proline [PATH:run01100] run_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:run01100] run_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:run01100] run_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:run01100] run_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:run01100] run_M00026   Histidine biosynthesis, PRPP => histidine [PATH:run01100] run_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:run01100] run_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:run01100] run_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:run01100] run_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:run01100] run_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:run01100] run_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:run01100] run_M00082   Fatty acid biosynthesis, initiation [PATH:run01100] run_M00083   Fatty acid biosynthesis, elongation [PATH:run01100] run_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:run01100] run_M00087   beta-Oxidation [PATH:run01100] run_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:run01100] run_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:run01100] run_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:run01100] run_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:run01100] run_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:run01100] run_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:run01100] run_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:run01100] run_M00155   Cytochrome c oxidase, prokaryotes [PATH:run01100] run_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:run01100] run_M00168   CAM (Crassulacean acid metabolism), dark [PATH:run01100] run_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:run01100] run_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:run01100] run_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:run01100] run_M00535   Isoleucine biosynthesis, pyruvate => 2-oxobutanoate [PATH:run01100] run_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:run01100] run_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:run01100] run_M00621   Glycine cleavage system [PATH:run01100] run_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:run01100] run_M00793   dTDP-L-rhamnose biosynthesis [PATH:run01100] run_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:run01100] run_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:run01100] run_M00970   Proline degradation, proline => glutamate [PATH:run01100] run_M00972   Proline metabolism [PATH:run01100] Organism Runella rosea [GN:run] Related pathway run00010   Glycolysis / Gluconeogenesis run00020   Citrate cycle (TCA cycle) run00030   Pentose phosphate pathway run00040   Pentose and glucuronate interconversions run00051   Fructose and mannose metabolism run00052   Galactose metabolism run00053   Ascorbate and aldarate metabolism run00061   Fatty acid biosynthesis run00071   Fatty acid degradation run00100   Steroid biosynthesis run00130   Ubiquinone and other terpenoid-quinone biosynthesis run00190   Oxidative phosphorylation run00220   Arginine biosynthesis run00230   Purine metabolism run00240   Pyrimidine metabolism run00250   Alanine, aspartate and glutamate metabolism run00260   Glycine, serine and threonine metabolism run00261   Monobactam biosynthesis run00270   Cysteine and methionine metabolism run00280   Valine, leucine and isoleucine degradation run00290   Valine, leucine and isoleucine biosynthesis run00300   Lysine biosynthesis run00310   Lysine degradation run00311   Penicillin and cephalosporin biosynthesis run00330   Arginine and proline metabolism run00332   Carbapenem biosynthesis run00340   Histidine metabolism run00350   Tyrosine metabolism run00360   Phenylalanine metabolism run00361   Chlorocyclohexane and chlorobenzene degradation run00362   Benzoate degradation run00364   Fluorobenzoate degradation run00380   Tryptophan metabolism run00400   Phenylalanine, tyrosine and tryptophan biosynthesis run00401   Novobiocin biosynthesis run00405   Phenazine biosynthesis run00410   beta-Alanine metabolism run00430   Taurine and hypotaurine metabolism run00440   Phosphonate and phosphinate metabolism run00450   Selenocompound metabolism run00460   Cyanoamino acid metabolism run00470   D-Amino acid metabolism run00480   Glutathione metabolism run00500   Starch and sucrose metabolism run00511   Other glycan degradation run00520   Amino sugar and nucleotide sugar metabolism run00521   Streptomycin biosynthesis run00523   Polyketide sugar unit biosynthesis run00525   Acarbose and validamycin biosynthesis run00540   Lipopolysaccharide biosynthesis run00541   O-Antigen nucleotide sugar biosynthesis run00542   O-Antigen repeat unit biosynthesis run00543   Exopolysaccharide biosynthesis run00550   Peptidoglycan biosynthesis run00552   Teichoic acid biosynthesis run00561   Glycerolipid metabolism run00562   Inositol phosphate metabolism run00564   Glycerophospholipid metabolism run00592   alpha-Linolenic acid metabolism run00600   Sphingolipid metabolism run00620   Pyruvate metabolism run00623   Toluene degradation run00625   Chloroalkane and chloroalkene degradation run00627   Aminobenzoate degradation run00630   Glyoxylate and dicarboxylate metabolism run00640   Propanoate metabolism run00643   Styrene degradation run00650   Butanoate metabolism run00660   C5-Branched dibasic acid metabolism run00670   One carbon pool by folate run00680   Methane metabolism run00710   Carbon fixation by Calvin cycle run00720   Other carbon fixation pathways run00730   Thiamine metabolism run00740   Riboflavin metabolism run00750   Vitamin B6 metabolism run00760   Nicotinate and nicotinamide metabolism run00770   Pantothenate and CoA biosynthesis run00780   Biotin metabolism run00785   Lipoic acid metabolism run00790   Folate biosynthesis run00860   Porphyrin metabolism run00900   Terpenoid backbone biosynthesis run00906   Carotenoid biosynthesis run00907   Pinene, camphor and geraniol degradation run00910   Nitrogen metabolism run00920   Sulfur metabolism run00930   Caprolactam degradation run00946   Degradation of flavonoids run00999   Biosynthesis of various plant secondary metabolites run01040   Biosynthesis of unsaturated fatty acids run01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

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