KEGG   PATHWAY: rut01200
Entry
rut01200                    Pathway                                
Name
Carbon metabolism - Ruegeria sp. THAF33
Description
Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains carbon utilization pathways of glycolysis (map00010), pentose phosphate pathway (map00030), and citrate cycle (map00020), and six known carbon fixation pathways (map00710 and map00720) as well as some pathways of methane metabolism (map00680). The six carbon fixation pathways are: (1) reductive pentose phosphate cycle (Calvin cycle) in plants and cyanobacteria that perform oxygenic photosynthesis, (2) reductive citrate cycle in photosynthetic green sulfur bacteria and some chemolithoautotrophs, (3) 3-hydroxypropionate bi-cycle in photosynthetic green nonsulfur bacteria, two variants of 4-hydroxybutyrate pathways in Crenarchaeota called (4) hydroxypropionate-hydroxybutyrate cycle and (5) dicarboxylate-hydroxybutyrate cycle, and (6) reductive acetyl-CoA pathway in methanogenic bacteria.
Class
Pathway map
rut01200  Carbon metabolism
rut01200

Module
rut_M00002  Glycolysis, core module involving three-carbon compounds [PATH:rut01200]
rut_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:rut01200]
rut_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:rut01200]
rut_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:rut01200]
rut_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:rut01200]
rut_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:rut01200]
rut_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:rut01200]
rut_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:rut01200]
rut_M00021  Cysteine biosynthesis, serine => cysteine [PATH:rut01200]
rut_M00169  CAM (Crassulacean acid metabolism), light [PATH:rut01200]
rut_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:rut01200]
rut_M00373  Ethylmalonyl pathway [PATH:rut01200]
rut_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:rut01200]
rut_M00621  Glycine cleavage system [PATH:rut01200]
rut_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:rut01200]
Organism
Ruegeria sp. THAF33 [GN:rut]
KO pathway
ko01200   
LinkDB

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