PATHWAY: savi01100 Help Entry savi01100                   Pathway                                 Name Metabolic pathways - Shewanella avicenniae Class BRITE hierarchy Pathway map savi01100   Metabolic pathways Module savi_M00002   Glycolysis, core module involving three-carbon compounds [PATH:savi01100] savi_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:savi01100] savi_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:savi01100] savi_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:savi01100] savi_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:savi01100] savi_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:savi01100] savi_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:savi01100] savi_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:savi01100] savi_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:savi01100] savi_M00012   Glyoxylate cycle [PATH:savi01100] savi_M00015   Proline biosynthesis, glutamate => proline [PATH:savi01100] savi_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:savi01100] savi_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:savi01100] savi_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:savi01100] savi_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:savi01100] savi_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:savi01100] savi_M00021   Cysteine biosynthesis, serine => cysteine [PATH:savi01100] savi_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:savi01100] savi_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:savi01100] savi_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:savi01100] savi_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:savi01100] savi_M00026   Histidine biosynthesis, PRPP => histidine [PATH:savi01100] savi_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:savi01100] savi_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:savi01100] savi_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:savi01100] savi_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:savi01100] savi_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:savi01100] savi_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:savi01100] savi_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:savi01100] savi_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:savi01100] savi_M00063   CMP-KDO biosynthesis [PATH:savi01100] savi_M00083   Fatty acid biosynthesis, elongation [PATH:savi01100] savi_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:savi01100] savi_M00087   beta-Oxidation [PATH:savi01100] savi_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:savi01100] savi_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:savi01100] savi_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:savi01100] savi_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:savi01100] savi_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:savi01100] savi_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:savi01100] savi_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:savi01100] savi_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:savi01100] savi_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:savi01100] savi_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:savi01100] savi_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:savi01100] savi_M00140   C1-unit interconversion, prokaryotes [PATH:savi01100] savi_M00149   Succinate dehydrogenase, prokaryotes [PATH:savi01100] savi_M00150   Fumarate reductase, prokaryotes [PATH:savi01100] savi_M00151   Cytochrome bc1 complex respiratory unit [PATH:savi01100] savi_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:savi01100] savi_M00168   CAM (Crassulacean acid metabolism), dark [PATH:savi01100] savi_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:savi01100] savi_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:savi01100] savi_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:savi01100] savi_M00417   Cytochrome o ubiquinol oxidase [PATH:savi01100] savi_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:savi01100] savi_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:savi01100] savi_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:savi01100] savi_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:savi01100] savi_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:savi01100] savi_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:savi01100] savi_M00621   Glycine cleavage system [PATH:savi01100] savi_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:savi01100] savi_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:savi01100] savi_M00793   dTDP-L-rhamnose biosynthesis [PATH:savi01100] savi_M00844   Arginine biosynthesis, ornithine => arginine [PATH:savi01100] savi_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:savi01100] savi_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:savi01100] savi_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:savi01100] savi_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:savi01100] savi_M00970   Proline degradation, proline => glutamate [PATH:savi01100] Organism Shewanella avicenniae [GN:savi] Related pathway savi00010   Glycolysis / Gluconeogenesis savi00020   Citrate cycle (TCA cycle) savi00030   Pentose phosphate pathway savi00040   Pentose and glucuronate interconversions savi00051   Fructose and mannose metabolism savi00052   Galactose metabolism savi00053   Ascorbate and aldarate metabolism savi00061   Fatty acid biosynthesis savi00071   Fatty acid degradation savi00130   Ubiquinone and other terpenoid-quinone biosynthesis savi00190   Oxidative phosphorylation savi00220   Arginine biosynthesis savi00230   Purine metabolism savi00240   Pyrimidine metabolism savi00250   Alanine, aspartate and glutamate metabolism savi00260   Glycine, serine and threonine metabolism savi00261   Monobactam biosynthesis savi00270   Cysteine and methionine metabolism savi00280   Valine, leucine and isoleucine degradation savi00290   Valine, leucine and isoleucine biosynthesis savi00300   Lysine biosynthesis savi00310   Lysine degradation savi00330   Arginine and proline metabolism savi00332   Carbapenem biosynthesis savi00340   Histidine metabolism savi00350   Tyrosine metabolism savi00360   Phenylalanine metabolism savi00362   Benzoate degradation savi00380   Tryptophan metabolism savi00400   Phenylalanine, tyrosine and tryptophan biosynthesis savi00401   Novobiocin biosynthesis savi00410   beta-Alanine metabolism savi00430   Taurine and hypotaurine metabolism savi00450   Selenocompound metabolism savi00460   Cyanoamino acid metabolism savi00470   D-Amino acid metabolism savi00480   Glutathione metabolism savi00500   Starch and sucrose metabolism savi00511   Other glycan degradation savi00520   Amino sugar and nucleotide sugar metabolism savi00521   Streptomycin biosynthesis savi00523   Polyketide sugar unit biosynthesis savi00525   Acarbose and validamycin biosynthesis savi00540   Lipopolysaccharide biosynthesis savi00541   O-Antigen nucleotide sugar biosynthesis savi00543   Exopolysaccharide biosynthesis savi00550   Peptidoglycan biosynthesis savi00552   Teichoic acid biosynthesis savi00561   Glycerolipid metabolism savi00562   Inositol phosphate metabolism savi00564   Glycerophospholipid metabolism savi00565   Ether lipid metabolism savi00592   alpha-Linolenic acid metabolism savi00620   Pyruvate metabolism savi00622   Xylene degradation savi00625   Chloroalkane and chloroalkene degradation savi00626   Naphthalene degradation savi00627   Aminobenzoate degradation savi00630   Glyoxylate and dicarboxylate metabolism savi00633   Nitrotoluene degradation savi00640   Propanoate metabolism savi00650   Butanoate metabolism savi00660   C5-Branched dibasic acid metabolism savi00670   One carbon pool by folate savi00680   Methane metabolism savi00710   Carbon fixation by Calvin cycle savi00720   Other carbon fixation pathways savi00730   Thiamine metabolism savi00740   Riboflavin metabolism savi00750   Vitamin B6 metabolism savi00760   Nicotinate and nicotinamide metabolism savi00770   Pantothenate and CoA biosynthesis savi00780   Biotin metabolism savi00785   Lipoic acid metabolism savi00790   Folate biosynthesis savi00860   Porphyrin metabolism savi00900   Terpenoid backbone biosynthesis savi00907   Pinene, camphor and geraniol degradation savi00910   Nitrogen metabolism savi00920   Sulfur metabolism savi00930   Caprolactam degradation savi00946   Degradation of flavonoids savi00999   Biosynthesis of various plant secondary metabolites savi01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system