KEGG   PATHWAY: sbo01100
Entry
sbo01100                    Pathway                                
Name
Metabolic pathways - Shigella boydii Sb227 (serotype 4)
Class
Pathway map
sbo01100  Metabolic pathways
sbo01100

Module
sbo_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sbo01100]
sbo_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sbo01100]
sbo_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sbo01100]
sbo_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sbo01100]
sbo_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sbo01100]
sbo_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sbo01100]
sbo_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sbo01100]
sbo_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sbo01100]
sbo_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:sbo01100]
sbo_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sbo01100]
sbo_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sbo01100]
sbo_M00015  Proline biosynthesis, glutamate => proline [PATH:sbo01100]
sbo_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sbo01100]
sbo_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sbo01100]
sbo_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sbo01100]
sbo_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sbo01100]
sbo_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:sbo01100]
sbo_M00021  Cysteine biosynthesis, serine => cysteine [PATH:sbo01100]
sbo_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sbo01100]
sbo_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:sbo01100]
sbo_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sbo01100]
sbo_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:sbo01100]
sbo_M00026  Histidine biosynthesis, PRPP => histidine [PATH:sbo01100]
sbo_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:sbo01100]
sbo_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sbo01100]
sbo_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sbo01100]
sbo_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sbo01100]
sbo_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:sbo01100]
sbo_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sbo01100]
sbo_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sbo01100]
sbo_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:sbo01100]
sbo_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sbo01100]
sbo_M00063  CMP-KDO biosynthesis [PATH:sbo01100]
sbo_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:sbo01100]
sbo_M00082  Fatty acid biosynthesis, initiation [PATH:sbo01100]
sbo_M00083  Fatty acid biosynthesis, elongation [PATH:sbo01100]
sbo_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:sbo01100]
sbo_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sbo01100]
sbo_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:sbo01100]
sbo_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sbo01100]
sbo_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sbo01100]
sbo_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:sbo01100]
sbo_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:sbo01100]
sbo_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:sbo01100]
sbo_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:sbo01100]
sbo_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sbo01100]
sbo_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:sbo01100]
sbo_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sbo01100]
sbo_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:sbo01100]
sbo_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:sbo01100]
sbo_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:sbo01100]
sbo_M00149  Succinate dehydrogenase, prokaryotes [PATH:sbo01100]
sbo_M00150  Fumarate reductase, prokaryotes [PATH:sbo01100]
sbo_M00168  CAM (Crassulacean acid metabolism), dark [PATH:sbo01100]
sbo_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:sbo01100]
sbo_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sbo01100]
sbo_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:sbo01100]
sbo_M00417  Cytochrome o ubiquinol oxidase [PATH:sbo01100]
sbo_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sbo01100]
sbo_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:sbo01100]
sbo_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:sbo01100]
sbo_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sbo01100]
sbo_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:sbo01100]
sbo_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sbo01100]
sbo_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sbo01100]
sbo_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:sbo01100]
sbo_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sbo01100]
sbo_M00621  Glycine cleavage system [PATH:sbo01100]
sbo_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sbo01100]
sbo_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sbo01100]
sbo_M00793  dTDP-L-rhamnose biosynthesis [PATH:sbo01100]
sbo_M00844  Arginine biosynthesis, ornithine => arginine [PATH:sbo01100]
sbo_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:sbo01100]
sbo_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sbo01100]
sbo_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:sbo01100]
sbo_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:sbo01100]
sbo_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sbo01100]
sbo_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sbo01100]
sbo_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:sbo01100]
sbo_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sbo01100]
sbo_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:sbo01100]
sbo_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sbo01100]
sbo_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:sbo01100]
sbo_M00970  Proline degradation, proline => glutamate [PATH:sbo01100]
Organism
Shigella boydii Sb227 (serotype 4) [GN:sbo]
Related
pathway
sbo00010  Glycolysis / Gluconeogenesis
sbo00020  Citrate cycle (TCA cycle)
sbo00030  Pentose phosphate pathway
sbo00040  Pentose and glucuronate interconversions
sbo00051  Fructose and mannose metabolism
sbo00052  Galactose metabolism
sbo00053  Ascorbate and aldarate metabolism
sbo00061  Fatty acid biosynthesis
sbo00071  Fatty acid degradation
sbo00121  Secondary bile acid biosynthesis
sbo00130  Ubiquinone and other terpenoid-quinone biosynthesis
sbo00190  Oxidative phosphorylation
sbo00220  Arginine biosynthesis
sbo00230  Purine metabolism
sbo00240  Pyrimidine metabolism
sbo00250  Alanine, aspartate and glutamate metabolism
sbo00260  Glycine, serine and threonine metabolism
sbo00261  Monobactam biosynthesis
sbo00270  Cysteine and methionine metabolism
sbo00280  Valine, leucine and isoleucine degradation
sbo00290  Valine, leucine and isoleucine biosynthesis
sbo00300  Lysine biosynthesis
sbo00310  Lysine degradation
sbo00330  Arginine and proline metabolism
sbo00332  Carbapenem biosynthesis
sbo00340  Histidine metabolism
sbo00350  Tyrosine metabolism
sbo00360  Phenylalanine metabolism
sbo00361  Chlorocyclohexane and chlorobenzene degradation
sbo00362  Benzoate degradation
sbo00364  Fluorobenzoate degradation
sbo00380  Tryptophan metabolism
sbo00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sbo00401  Novobiocin biosynthesis
sbo00410  beta-Alanine metabolism
sbo00430  Taurine and hypotaurine metabolism
sbo00440  Phosphonate and phosphinate metabolism
sbo00450  Selenocompound metabolism
sbo00460  Cyanoamino acid metabolism
sbo00470  D-Amino acid metabolism
sbo00480  Glutathione metabolism
sbo00500  Starch and sucrose metabolism
sbo00511  Other glycan degradation
sbo00520  Amino sugar and nucleotide sugar metabolism
sbo00521  Streptomycin biosynthesis
sbo00523  Polyketide sugar unit biosynthesis
sbo00525  Acarbose and validamycin biosynthesis
sbo00540  Lipopolysaccharide biosynthesis
sbo00541  O-Antigen nucleotide sugar biosynthesis
sbo00542  O-Antigen repeat unit biosynthesis
sbo00543  Exopolysaccharide biosynthesis
sbo00550  Peptidoglycan biosynthesis
sbo00552  Teichoic acid biosynthesis
sbo00561  Glycerolipid metabolism
sbo00562  Inositol phosphate metabolism
sbo00564  Glycerophospholipid metabolism
sbo00565  Ether lipid metabolism
sbo00592  alpha-Linolenic acid metabolism
sbo00600  Sphingolipid metabolism
sbo00620  Pyruvate metabolism
sbo00623  Toluene degradation
sbo00625  Chloroalkane and chloroalkene degradation
sbo00626  Naphthalene degradation
sbo00627  Aminobenzoate degradation
sbo00630  Glyoxylate and dicarboxylate metabolism
sbo00633  Nitrotoluene degradation
sbo00640  Propanoate metabolism
sbo00650  Butanoate metabolism
sbo00660  C5-Branched dibasic acid metabolism
sbo00670  One carbon pool by folate
sbo00680  Methane metabolism
sbo00710  Carbon fixation by Calvin cycle
sbo00720  Other carbon fixation pathways
sbo00730  Thiamine metabolism
sbo00740  Riboflavin metabolism
sbo00750  Vitamin B6 metabolism
sbo00760  Nicotinate and nicotinamide metabolism
sbo00770  Pantothenate and CoA biosynthesis
sbo00780  Biotin metabolism
sbo00785  Lipoic acid metabolism
sbo00790  Folate biosynthesis
sbo00860  Porphyrin metabolism
sbo00900  Terpenoid backbone biosynthesis
sbo00907  Pinene, camphor and geraniol degradation
sbo00910  Nitrogen metabolism
sbo00920  Sulfur metabolism
sbo00930  Caprolactam degradation
sbo00946  Degradation of flavonoids
sbo00997  Biosynthesis of various other secondary metabolites
sbo00999  Biosynthesis of various plant secondary metabolites
sbo01040  Biosynthesis of unsaturated fatty acids
sbo01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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