PATHWAY: scaa01100 Help Entry scaa01100                   Pathway                                 Name Metabolic pathways - Shewanella carassii Class BRITE hierarchy Pathway map scaa01100   Metabolic pathways Module scaa_M00002   Glycolysis, core module involving three-carbon compounds [PATH:scaa01100] scaa_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:scaa01100] scaa_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:scaa01100] scaa_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:scaa01100] scaa_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:scaa01100] scaa_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:scaa01100] scaa_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:scaa01100] scaa_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:scaa01100] scaa_M00012   Glyoxylate cycle [PATH:scaa01100] scaa_M00015   Proline biosynthesis, glutamate => proline [PATH:scaa01100] scaa_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:scaa01100] scaa_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:scaa01100] scaa_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:scaa01100] scaa_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:scaa01100] scaa_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:scaa01100] scaa_M00021   Cysteine biosynthesis, serine => cysteine [PATH:scaa01100] scaa_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:scaa01100] scaa_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:scaa01100] scaa_M00026   Histidine biosynthesis, PRPP => histidine [PATH:scaa01100] scaa_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:scaa01100] scaa_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:scaa01100] scaa_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:scaa01100] scaa_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:scaa01100] scaa_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:scaa01100] scaa_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:scaa01100] scaa_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:scaa01100] scaa_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:scaa01100] scaa_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:scaa01100] scaa_M00063   CMP-KDO biosynthesis [PATH:scaa01100] scaa_M00083   Fatty acid biosynthesis, elongation [PATH:scaa01100] scaa_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:scaa01100] scaa_M00087   beta-Oxidation [PATH:scaa01100] scaa_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:scaa01100] scaa_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:scaa01100] scaa_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:scaa01100] scaa_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:scaa01100] scaa_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:scaa01100] scaa_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:scaa01100] scaa_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:scaa01100] scaa_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:scaa01100] scaa_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:scaa01100] scaa_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:scaa01100] scaa_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:scaa01100] scaa_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:scaa01100] scaa_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:scaa01100] scaa_M00140   C1-unit interconversion, prokaryotes [PATH:scaa01100] scaa_M00149   Succinate dehydrogenase, prokaryotes [PATH:scaa01100] scaa_M00151   Cytochrome bc1 complex respiratory unit [PATH:scaa01100] scaa_M00155   Cytochrome c oxidase, prokaryotes [PATH:scaa01100] scaa_M00156   Cytochrome c oxidase, cbb3-type [PATH:scaa01100] scaa_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:scaa01100] scaa_M00168   CAM (Crassulacean acid metabolism), dark [PATH:scaa01100] scaa_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:scaa01100] scaa_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:scaa01100] scaa_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:scaa01100] scaa_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:scaa01100] scaa_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:scaa01100] scaa_M00621   Glycine cleavage system [PATH:scaa01100] scaa_M00793   dTDP-L-rhamnose biosynthesis [PATH:scaa01100] scaa_M00844   Arginine biosynthesis, ornithine => arginine [PATH:scaa01100] scaa_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:scaa01100] scaa_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:scaa01100] scaa_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:scaa01100] scaa_M00970   Proline degradation, proline => glutamate [PATH:scaa01100] Organism Shewanella carassii [GN:scaa] Related pathway scaa00010   Glycolysis / Gluconeogenesis scaa00020   Citrate cycle (TCA cycle) scaa00030   Pentose phosphate pathway scaa00040   Pentose and glucuronate interconversions scaa00051   Fructose and mannose metabolism scaa00052   Galactose metabolism scaa00053   Ascorbate and aldarate metabolism scaa00061   Fatty acid biosynthesis scaa00071   Fatty acid degradation scaa00130   Ubiquinone and other terpenoid-quinone biosynthesis scaa00190   Oxidative phosphorylation scaa00220   Arginine biosynthesis scaa00230   Purine metabolism scaa00240   Pyrimidine metabolism scaa00250   Alanine, aspartate and glutamate metabolism scaa00260   Glycine, serine and threonine metabolism scaa00261   Monobactam biosynthesis scaa00270   Cysteine and methionine metabolism scaa00280   Valine, leucine and isoleucine degradation scaa00290   Valine, leucine and isoleucine biosynthesis scaa00300   Lysine biosynthesis scaa00310   Lysine degradation scaa00330   Arginine and proline metabolism scaa00332   Carbapenem biosynthesis scaa00340   Histidine metabolism scaa00350   Tyrosine metabolism scaa00360   Phenylalanine metabolism scaa00361   Chlorocyclohexane and chlorobenzene degradation scaa00362   Benzoate degradation scaa00364   Fluorobenzoate degradation scaa00380   Tryptophan metabolism scaa00400   Phenylalanine, tyrosine and tryptophan biosynthesis scaa00401   Novobiocin biosynthesis scaa00410   beta-Alanine metabolism scaa00430   Taurine and hypotaurine metabolism scaa00450   Selenocompound metabolism scaa00460   Cyanoamino acid metabolism scaa00470   D-Amino acid metabolism scaa00480   Glutathione metabolism scaa00500   Starch and sucrose metabolism scaa00511   Other glycan degradation scaa00520   Amino sugar and nucleotide sugar metabolism scaa00521   Streptomycin biosynthesis scaa00523   Polyketide sugar unit biosynthesis scaa00525   Acarbose and validamycin biosynthesis scaa00540   Lipopolysaccharide biosynthesis scaa00541   O-Antigen nucleotide sugar biosynthesis scaa00543   Exopolysaccharide biosynthesis scaa00550   Peptidoglycan biosynthesis scaa00552   Teichoic acid biosynthesis scaa00561   Glycerolipid metabolism scaa00562   Inositol phosphate metabolism scaa00564   Glycerophospholipid metabolism scaa00565   Ether lipid metabolism scaa00592   alpha-Linolenic acid metabolism scaa00600   Sphingolipid metabolism scaa00620   Pyruvate metabolism scaa00623   Toluene degradation scaa00625   Chloroalkane and chloroalkene degradation scaa00626   Naphthalene degradation scaa00627   Aminobenzoate degradation scaa00630   Glyoxylate and dicarboxylate metabolism scaa00633   Nitrotoluene degradation scaa00640   Propanoate metabolism scaa00643   Styrene degradation scaa00650   Butanoate metabolism scaa00660   C5-Branched dibasic acid metabolism scaa00670   One carbon pool by folate scaa00680   Methane metabolism scaa00710   Carbon fixation by Calvin cycle scaa00720   Other carbon fixation pathways scaa00730   Thiamine metabolism scaa00740   Riboflavin metabolism scaa00750   Vitamin B6 metabolism scaa00760   Nicotinate and nicotinamide metabolism scaa00770   Pantothenate and CoA biosynthesis scaa00780   Biotin metabolism scaa00785   Lipoic acid metabolism scaa00790   Folate biosynthesis scaa00860   Porphyrin metabolism scaa00900   Terpenoid backbone biosynthesis scaa00903   Limonene degradation scaa00907   Pinene, camphor and geraniol degradation scaa00910   Nitrogen metabolism scaa00920   Sulfur metabolism scaa00930   Caprolactam degradation scaa00999   Biosynthesis of various plant secondary metabolites scaa01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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