PATHWAY: scar01100 Help Entry scar01100                   Pathway                                 Name Metabolic pathways - Staphylococcus caprae Class BRITE hierarchy Pathway map scar01100   Metabolic pathways Module scar_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:scar01100] scar_M00002   Glycolysis, core module involving three-carbon compounds [PATH:scar01100] scar_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:scar01100] scar_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:scar01100] scar_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:scar01100] scar_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:scar01100] scar_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:scar01100] scar_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:scar01100] scar_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:scar01100] scar_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:scar01100] scar_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:scar01100] scar_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:scar01100] scar_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:scar01100] scar_M00021   Cysteine biosynthesis, serine => cysteine [PATH:scar01100] scar_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:scar01100] scar_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:scar01100] scar_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:scar01100] scar_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:scar01100] scar_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:scar01100] scar_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:scar01100] scar_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:scar01100] scar_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:scar01100] scar_M00082   Fatty acid biosynthesis, initiation [PATH:scar01100] scar_M00083   Fatty acid biosynthesis, elongation [PATH:scar01100] scar_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:scar01100] scar_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:scar01100] scar_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:scar01100] scar_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:scar01100] scar_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:scar01100] scar_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:scar01100] scar_M00140   C1-unit interconversion, prokaryotes [PATH:scar01100] scar_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:scar01100] scar_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:scar01100] scar_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:scar01100] scar_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:scar01100] scar_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:scar01100] scar_M00416   Cytochrome aa3-600 menaquinol oxidase [PATH:scar01100] scar_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:scar01100] scar_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:scar01100] scar_M00555   Betaine biosynthesis, choline => betaine [PATH:scar01100] scar_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:scar01100] scar_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:scar01100] scar_M00580   Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:scar01100] scar_M00621   Glycine cleavage system [PATH:scar01100] scar_M00844   Arginine biosynthesis, ornithine => arginine [PATH:scar01100] scar_M00876   Staphyloferrin A biosynthesis, L-ornithine => staphyloferrin A [PATH:scar01100] scar_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:scar01100] scar_M00883   Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:scar01100] scar_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:scar01100] scar_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:scar01100] scar_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:scar01100] scar_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:scar01100] scar_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:scar01100] scar_M00970   Proline degradation, proline => glutamate [PATH:scar01100] scar_M00972   Proline metabolism [PATH:scar01100] Organism Staphylococcus caprae [GN:scar] Related pathway scar00010   Glycolysis / Gluconeogenesis scar00020   Citrate cycle (TCA cycle) scar00030   Pentose phosphate pathway scar00040   Pentose and glucuronate interconversions scar00051   Fructose and mannose metabolism scar00052   Galactose metabolism scar00053   Ascorbate and aldarate metabolism scar00061   Fatty acid biosynthesis scar00071   Fatty acid degradation scar00074   Mycolic acid biosynthesis scar00130   Ubiquinone and other terpenoid-quinone biosynthesis scar00190   Oxidative phosphorylation scar00220   Arginine biosynthesis scar00230   Purine metabolism scar00240   Pyrimidine metabolism scar00250   Alanine, aspartate and glutamate metabolism scar00260   Glycine, serine and threonine metabolism scar00261   Monobactam biosynthesis scar00270   Cysteine and methionine metabolism scar00280   Valine, leucine and isoleucine degradation scar00290   Valine, leucine and isoleucine biosynthesis scar00300   Lysine biosynthesis scar00310   Lysine degradation scar00330   Arginine and proline metabolism scar00340   Histidine metabolism scar00350   Tyrosine metabolism scar00360   Phenylalanine metabolism scar00362   Benzoate degradation scar00380   Tryptophan metabolism scar00400   Phenylalanine, tyrosine and tryptophan biosynthesis scar00401   Novobiocin biosynthesis scar00410   beta-Alanine metabolism scar00430   Taurine and hypotaurine metabolism scar00450   Selenocompound metabolism scar00460   Cyanoamino acid metabolism scar00470   D-Amino acid metabolism scar00480   Glutathione metabolism scar00500   Starch and sucrose metabolism scar00520   Amino sugar and nucleotide sugar metabolism scar00521   Streptomycin biosynthesis scar00541   O-Antigen nucleotide sugar biosynthesis scar00542   O-Antigen repeat unit biosynthesis scar00543   Exopolysaccharide biosynthesis scar00550   Peptidoglycan biosynthesis scar00552   Teichoic acid biosynthesis scar00561   Glycerolipid metabolism scar00562   Inositol phosphate metabolism scar00564   Glycerophospholipid metabolism scar00620   Pyruvate metabolism scar00621   Dioxin degradation scar00622   Xylene degradation scar00625   Chloroalkane and chloroalkene degradation scar00630   Glyoxylate and dicarboxylate metabolism scar00640   Propanoate metabolism scar00650   Butanoate metabolism scar00660   C5-Branched dibasic acid metabolism scar00670   One carbon pool by folate scar00680   Methane metabolism scar00710   Carbon fixation by Calvin cycle scar00720   Other carbon fixation pathways scar00730   Thiamine metabolism scar00740   Riboflavin metabolism scar00750   Vitamin B6 metabolism scar00760   Nicotinate and nicotinamide metabolism scar00770   Pantothenate and CoA biosynthesis scar00780   Biotin metabolism scar00785   Lipoic acid metabolism scar00790   Folate biosynthesis scar00860   Porphyrin metabolism scar00900   Terpenoid backbone biosynthesis scar00906   Carotenoid biosynthesis scar00910   Nitrogen metabolism scar00920   Sulfur metabolism scar00997   Biosynthesis of various other secondary metabolites scar00999   Biosynthesis of various plant secondary metabolites scar01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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