PATHWAY: scib01100 Help Entry scib01100                   Pathway                                 Name Metabolic pathways - Salicibibacter cibi Class BRITE hierarchy Pathway map scib01100   Metabolic pathways Module scib_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:scib01100] scib_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:scib01100] scib_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:scib01100] scib_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:scib01100] scib_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:scib01100] scib_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:scib01100] scib_M00012   Glyoxylate cycle [PATH:scib01100] scib_M00015   Proline biosynthesis, glutamate => proline [PATH:scib01100] scib_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:scib01100] scib_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:scib01100] scib_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:scib01100] scib_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:scib01100] scib_M00021   Cysteine biosynthesis, serine => cysteine [PATH:scib01100] scib_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:scib01100] scib_M00026   Histidine biosynthesis, PRPP => histidine [PATH:scib01100] scib_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:scib01100] scib_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:scib01100] scib_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:scib01100] scib_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:scib01100] scib_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:scib01100] scib_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:scib01100] scib_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:scib01100] scib_M00082   Fatty acid biosynthesis, initiation [PATH:scib01100] scib_M00083   Fatty acid biosynthesis, elongation [PATH:scib01100] scib_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:scib01100] scib_M00087   beta-Oxidation [PATH:scib01100] scib_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:scib01100] scib_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:scib01100] scib_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:scib01100] scib_M00140   C1-unit interconversion, prokaryotes [PATH:scib01100] scib_M00151   Cytochrome bc1 complex respiratory unit [PATH:scib01100] scib_M00155   Cytochrome c oxidase, prokaryotes [PATH:scib01100] scib_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:scib01100] scib_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:scib01100] scib_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:scib01100] scib_M00416   Cytochrome aa3-600 menaquinol oxidase [PATH:scib01100] scib_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:scib01100] scib_M00525   Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:scib01100] scib_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:scib01100] scib_M00555   Betaine biosynthesis, choline => betaine [PATH:scib01100] scib_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:scib01100] scib_M00621   Glycine cleavage system [PATH:scib01100] scib_M00844   Arginine biosynthesis, ornithine => arginine [PATH:scib01100] scib_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:scib01100] scib_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:scib01100] scib_M00883   Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:scib01100] scib_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:scib01100] scib_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:scib01100] scib_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:scib01100] scib_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:scib01100] scib_M00970   Proline degradation, proline => glutamate [PATH:scib01100] scib_M00972   Proline metabolism [PATH:scib01100] Organism Salicibibacter cibi [GN:scib] Related pathway scib00010   Glycolysis / Gluconeogenesis scib00020   Citrate cycle (TCA cycle) scib00030   Pentose phosphate pathway scib00040   Pentose and glucuronate interconversions scib00051   Fructose and mannose metabolism scib00052   Galactose metabolism scib00053   Ascorbate and aldarate metabolism scib00061   Fatty acid biosynthesis scib00071   Fatty acid degradation scib00074   Mycolic acid biosynthesis scib00130   Ubiquinone and other terpenoid-quinone biosynthesis scib00190   Oxidative phosphorylation scib00220   Arginine biosynthesis scib00230   Purine metabolism scib00240   Pyrimidine metabolism scib00250   Alanine, aspartate and glutamate metabolism scib00260   Glycine, serine and threonine metabolism scib00261   Monobactam biosynthesis scib00270   Cysteine and methionine metabolism scib00280   Valine, leucine and isoleucine degradation scib00290   Valine, leucine and isoleucine biosynthesis scib00300   Lysine biosynthesis scib00310   Lysine degradation scib00330   Arginine and proline metabolism scib00332   Carbapenem biosynthesis scib00340   Histidine metabolism scib00350   Tyrosine metabolism scib00360   Phenylalanine metabolism scib00361   Chlorocyclohexane and chlorobenzene degradation scib00362   Benzoate degradation scib00380   Tryptophan metabolism scib00400   Phenylalanine, tyrosine and tryptophan biosynthesis scib00401   Novobiocin biosynthesis scib00410   beta-Alanine metabolism scib00430   Taurine and hypotaurine metabolism scib00450   Selenocompound metabolism scib00460   Cyanoamino acid metabolism scib00470   D-Amino acid metabolism scib00480   Glutathione metabolism scib00500   Starch and sucrose metabolism scib00520   Amino sugar and nucleotide sugar metabolism scib00521   Streptomycin biosynthesis scib00541   O-Antigen nucleotide sugar biosynthesis scib00543   Exopolysaccharide biosynthesis scib00550   Peptidoglycan biosynthesis scib00552   Teichoic acid biosynthesis scib00561   Glycerolipid metabolism scib00562   Inositol phosphate metabolism scib00564   Glycerophospholipid metabolism scib00592   alpha-Linolenic acid metabolism scib00620   Pyruvate metabolism scib00622   Xylene degradation scib00625   Chloroalkane and chloroalkene degradation scib00626   Naphthalene degradation scib00627   Aminobenzoate degradation scib00630   Glyoxylate and dicarboxylate metabolism scib00640   Propanoate metabolism scib00643   Styrene degradation scib00650   Butanoate metabolism scib00660   C5-Branched dibasic acid metabolism scib00670   One carbon pool by folate scib00680   Methane metabolism scib00710   Carbon fixation by Calvin cycle scib00720   Other carbon fixation pathways scib00730   Thiamine metabolism scib00740   Riboflavin metabolism scib00750   Vitamin B6 metabolism scib00760   Nicotinate and nicotinamide metabolism scib00770   Pantothenate and CoA biosynthesis scib00780   Biotin metabolism scib00785   Lipoic acid metabolism scib00790   Folate biosynthesis scib00860   Porphyrin metabolism scib00900   Terpenoid backbone biosynthesis scib00907   Pinene, camphor and geraniol degradation scib00910   Nitrogen metabolism scib00920   Sulfur metabolism scib00999   Biosynthesis of various plant secondary metabolites scib01053   Biosynthesis of siderophore group nonribosomal peptides scib01057   Biosynthesis of type II polyketide products KO pathway ko01100     LinkDB All DBs

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