KEGG   PATHWAY: see01100
Entry
see01100                    Pathway                                
Name
Metabolic pathways - Salmonella enterica subsp. enterica serovar Newport SL254
Class
Pathway map
see01100  Metabolic pathways
see01100

Module
see_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:see01100]
see_M00002  Glycolysis, core module involving three-carbon compounds [PATH:see01100]
see_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:see01100]
see_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:see01100]
see_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:see01100]
see_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:see01100]
see_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:see01100]
see_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:see01100]
see_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:see01100]
see_M00012  Glyoxylate cycle [PATH:see01100]
see_M00015  Proline biosynthesis, glutamate => proline [PATH:see01100]
see_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:see01100]
see_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:see01100]
see_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:see01100]
see_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:see01100]
see_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:see01100]
see_M00021  Cysteine biosynthesis, serine => cysteine [PATH:see01100]
see_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:see01100]
see_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:see01100]
see_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:see01100]
see_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:see01100]
see_M00026  Histidine biosynthesis, PRPP => histidine [PATH:see01100]
see_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:see01100]
see_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:see01100]
see_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:see01100]
see_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:see01100]
see_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:see01100]
see_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:see01100]
see_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:see01100]
see_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:see01100]
see_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:see01100]
see_M00063  CMP-KDO biosynthesis [PATH:see01100]
see_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:see01100]
see_M00082  Fatty acid biosynthesis, initiation [PATH:see01100]
see_M00083  Fatty acid biosynthesis, elongation [PATH:see01100]
see_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:see01100]
see_M00087  beta-Oxidation [PATH:see01100]
see_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:see01100]
see_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:see01100]
see_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:see01100]
see_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:see01100]
see_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:see01100]
see_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:see01100]
see_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:see01100]
see_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:see01100]
see_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:see01100]
see_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:see01100]
see_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:see01100]
see_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:see01100]
see_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:see01100]
see_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:see01100]
see_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:see01100]
see_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:see01100]
see_M00149  Succinate dehydrogenase, prokaryotes [PATH:see01100]
see_M00150  Fumarate reductase, prokaryotes [PATH:see01100]
see_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:see01100]
see_M00168  CAM (Crassulacean acid metabolism), dark [PATH:see01100]
see_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:see01100]
see_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:see01100]
see_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:see01100]
see_M00417  Cytochrome o ubiquinol oxidase [PATH:see01100]
see_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:see01100]
see_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:see01100]
see_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:see01100]
see_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:see01100]
see_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:see01100]
see_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:see01100]
see_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:see01100]
see_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:see01100]
see_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:see01100]
see_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:see01100]
see_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:see01100]
see_M00621  Glycine cleavage system [PATH:see01100]
see_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:see01100]
see_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:see01100]
see_M00793  dTDP-L-rhamnose biosynthesis [PATH:see01100]
see_M00844  Arginine biosynthesis, ornithine => arginine [PATH:see01100]
see_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:see01100]
see_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:see01100]
see_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:see01100]
see_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:see01100]
see_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:see01100]
see_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:see01100]
see_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:see01100]
see_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:see01100]
see_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:see01100]
see_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:see01100]
see_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:see01100]
see_M00970  Proline degradation, proline => glutamate [PATH:see01100]
Organism
Salmonella enterica subsp. enterica serovar Newport SL254 [GN:see]
Related
pathway
see00010  Glycolysis / Gluconeogenesis
see00020  Citrate cycle (TCA cycle)
see00030  Pentose phosphate pathway
see00040  Pentose and glucuronate interconversions
see00051  Fructose and mannose metabolism
see00052  Galactose metabolism
see00053  Ascorbate and aldarate metabolism
see00061  Fatty acid biosynthesis
see00071  Fatty acid degradation
see00130  Ubiquinone and other terpenoid-quinone biosynthesis
see00190  Oxidative phosphorylation
see00220  Arginine biosynthesis
see00230  Purine metabolism
see00240  Pyrimidine metabolism
see00250  Alanine, aspartate and glutamate metabolism
see00260  Glycine, serine and threonine metabolism
see00261  Monobactam biosynthesis
see00270  Cysteine and methionine metabolism
see00280  Valine, leucine and isoleucine degradation
see00290  Valine, leucine and isoleucine biosynthesis
see00300  Lysine biosynthesis
see00310  Lysine degradation
see00330  Arginine and proline metabolism
see00332  Carbapenem biosynthesis
see00340  Histidine metabolism
see00350  Tyrosine metabolism
see00360  Phenylalanine metabolism
see00361  Chlorocyclohexane and chlorobenzene degradation
see00362  Benzoate degradation
see00364  Fluorobenzoate degradation
see00380  Tryptophan metabolism
see00400  Phenylalanine, tyrosine and tryptophan biosynthesis
see00401  Novobiocin biosynthesis
see00410  beta-Alanine metabolism
see00430  Taurine and hypotaurine metabolism
see00440  Phosphonate and phosphinate metabolism
see00450  Selenocompound metabolism
see00460  Cyanoamino acid metabolism
see00470  D-Amino acid metabolism
see00480  Glutathione metabolism
see00500  Starch and sucrose metabolism
see00520  Amino sugar and nucleotide sugar metabolism
see00521  Streptomycin biosynthesis
see00523  Polyketide sugar unit biosynthesis
see00525  Acarbose and validamycin biosynthesis
see00540  Lipopolysaccharide biosynthesis
see00541  O-Antigen nucleotide sugar biosynthesis
see00542  O-Antigen repeat unit biosynthesis
see00543  Exopolysaccharide biosynthesis
see00550  Peptidoglycan biosynthesis
see00552  Teichoic acid biosynthesis
see00561  Glycerolipid metabolism
see00562  Inositol phosphate metabolism
see00564  Glycerophospholipid metabolism
see00565  Ether lipid metabolism
see00592  alpha-Linolenic acid metabolism
see00600  Sphingolipid metabolism
see00620  Pyruvate metabolism
see00623  Toluene degradation
see00625  Chloroalkane and chloroalkene degradation
see00626  Naphthalene degradation
see00627  Aminobenzoate degradation
see00630  Glyoxylate and dicarboxylate metabolism
see00633  Nitrotoluene degradation
see00640  Propanoate metabolism
see00643  Styrene degradation
see00650  Butanoate metabolism
see00660  C5-Branched dibasic acid metabolism
see00670  One carbon pool by folate
see00680  Methane metabolism
see00710  Carbon fixation by Calvin cycle
see00720  Other carbon fixation pathways
see00730  Thiamine metabolism
see00740  Riboflavin metabolism
see00750  Vitamin B6 metabolism
see00760  Nicotinate and nicotinamide metabolism
see00770  Pantothenate and CoA biosynthesis
see00780  Biotin metabolism
see00785  Lipoic acid metabolism
see00790  Folate biosynthesis
see00860  Porphyrin metabolism
see00900  Terpenoid backbone biosynthesis
see00907  Pinene, camphor and geraniol degradation
see00910  Nitrogen metabolism
see00920  Sulfur metabolism
see00930  Caprolactam degradation
see00946  Degradation of flavonoids
see00999  Biosynthesis of various plant secondary metabolites
see01040  Biosynthesis of unsaturated fatty acids
see01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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