KEGG   PATHWAY: sene01100
Entry
sene01100                   Pathway                                
Name
Metabolic pathways - Salmonella enterica subsp. enterica serovar Thompson
Class
Pathway map
sene01100  Metabolic pathways
sene01100

Module
sene_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sene01100]
sene_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sene01100]
sene_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sene01100]
sene_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sene01100]
sene_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sene01100]
sene_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sene01100]
sene_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sene01100]
sene_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sene01100]
sene_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:sene01100]
sene_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sene01100]
sene_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sene01100]
sene_M00012  Glyoxylate cycle [PATH:sene01100]
sene_M00015  Proline biosynthesis, glutamate => proline [PATH:sene01100]
sene_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sene01100]
sene_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sene01100]
sene_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sene01100]
sene_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sene01100]
sene_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:sene01100]
sene_M00021  Cysteine biosynthesis, serine => cysteine [PATH:sene01100]
sene_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sene01100]
sene_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:sene01100]
sene_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sene01100]
sene_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:sene01100]
sene_M00026  Histidine biosynthesis, PRPP => histidine [PATH:sene01100]
sene_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:sene01100]
sene_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:sene01100]
sene_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sene01100]
sene_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sene01100]
sene_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sene01100]
sene_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:sene01100]
sene_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sene01100]
sene_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sene01100]
sene_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:sene01100]
sene_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sene01100]
sene_M00063  CMP-KDO biosynthesis [PATH:sene01100]
sene_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:sene01100]
sene_M00082  Fatty acid biosynthesis, initiation [PATH:sene01100]
sene_M00083  Fatty acid biosynthesis, elongation [PATH:sene01100]
sene_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:sene01100]
sene_M00087  beta-Oxidation [PATH:sene01100]
sene_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sene01100]
sene_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:sene01100]
sene_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sene01100]
sene_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sene01100]
sene_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sene01100]
sene_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:sene01100]
sene_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:sene01100]
sene_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:sene01100]
sene_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:sene01100]
sene_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:sene01100]
sene_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sene01100]
sene_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:sene01100]
sene_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sene01100]
sene_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:sene01100]
sene_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:sene01100]
sene_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:sene01100]
sene_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:sene01100]
sene_M00149  Succinate dehydrogenase, prokaryotes [PATH:sene01100]
sene_M00150  Fumarate reductase, prokaryotes [PATH:sene01100]
sene_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:sene01100]
sene_M00168  CAM (Crassulacean acid metabolism), dark [PATH:sene01100]
sene_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:sene01100]
sene_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sene01100]
sene_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:sene01100]
sene_M00417  Cytochrome o ubiquinol oxidase [PATH:sene01100]
sene_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sene01100]
sene_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:sene01100]
sene_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:sene01100]
sene_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sene01100]
sene_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:sene01100]
sene_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:sene01100]
sene_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sene01100]
sene_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:sene01100]
sene_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sene01100]
sene_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:sene01100]
sene_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sene01100]
sene_M00621  Glycine cleavage system [PATH:sene01100]
sene_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sene01100]
sene_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sene01100]
sene_M00844  Arginine biosynthesis, ornithine => arginine [PATH:sene01100]
sene_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:sene01100]
sene_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sene01100]
sene_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:sene01100]
sene_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:sene01100]
sene_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sene01100]
sene_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sene01100]
sene_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:sene01100]
sene_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sene01100]
sene_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:sene01100]
sene_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sene01100]
sene_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:sene01100]
sene_M00970  Proline degradation, proline => glutamate [PATH:sene01100]
Organism
Salmonella enterica subsp. enterica serovar Thompson [GN:sene]
Related
pathway
sene00010  Glycolysis / Gluconeogenesis
sene00020  Citrate cycle (TCA cycle)
sene00030  Pentose phosphate pathway
sene00040  Pentose and glucuronate interconversions
sene00051  Fructose and mannose metabolism
sene00052  Galactose metabolism
sene00053  Ascorbate and aldarate metabolism
sene00061  Fatty acid biosynthesis
sene00071  Fatty acid degradation
sene00130  Ubiquinone and other terpenoid-quinone biosynthesis
sene00190  Oxidative phosphorylation
sene00220  Arginine biosynthesis
sene00230  Purine metabolism
sene00240  Pyrimidine metabolism
sene00250  Alanine, aspartate and glutamate metabolism
sene00260  Glycine, serine and threonine metabolism
sene00261  Monobactam biosynthesis
sene00270  Cysteine and methionine metabolism
sene00280  Valine, leucine and isoleucine degradation
sene00290  Valine, leucine and isoleucine biosynthesis
sene00300  Lysine biosynthesis
sene00310  Lysine degradation
sene00330  Arginine and proline metabolism
sene00332  Carbapenem biosynthesis
sene00340  Histidine metabolism
sene00350  Tyrosine metabolism
sene00360  Phenylalanine metabolism
sene00361  Chlorocyclohexane and chlorobenzene degradation
sene00362  Benzoate degradation
sene00364  Fluorobenzoate degradation
sene00380  Tryptophan metabolism
sene00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sene00401  Novobiocin biosynthesis
sene00410  beta-Alanine metabolism
sene00430  Taurine and hypotaurine metabolism
sene00440  Phosphonate and phosphinate metabolism
sene00450  Selenocompound metabolism
sene00460  Cyanoamino acid metabolism
sene00470  D-Amino acid metabolism
sene00480  Glutathione metabolism
sene00500  Starch and sucrose metabolism
sene00520  Amino sugar and nucleotide sugar metabolism
sene00521  Streptomycin biosynthesis
sene00523  Polyketide sugar unit biosynthesis
sene00525  Acarbose and validamycin biosynthesis
sene00540  Lipopolysaccharide biosynthesis
sene00541  O-Antigen nucleotide sugar biosynthesis
sene00542  O-Antigen repeat unit biosynthesis
sene00543  Exopolysaccharide biosynthesis
sene00550  Peptidoglycan biosynthesis
sene00552  Teichoic acid biosynthesis
sene00561  Glycerolipid metabolism
sene00562  Inositol phosphate metabolism
sene00564  Glycerophospholipid metabolism
sene00565  Ether lipid metabolism
sene00592  alpha-Linolenic acid metabolism
sene00600  Sphingolipid metabolism
sene00620  Pyruvate metabolism
sene00623  Toluene degradation
sene00625  Chloroalkane and chloroalkene degradation
sene00626  Naphthalene degradation
sene00627  Aminobenzoate degradation
sene00630  Glyoxylate and dicarboxylate metabolism
sene00633  Nitrotoluene degradation
sene00640  Propanoate metabolism
sene00643  Styrene degradation
sene00650  Butanoate metabolism
sene00660  C5-Branched dibasic acid metabolism
sene00670  One carbon pool by folate
sene00680  Methane metabolism
sene00710  Carbon fixation by Calvin cycle
sene00720  Other carbon fixation pathways
sene00730  Thiamine metabolism
sene00740  Riboflavin metabolism
sene00750  Vitamin B6 metabolism
sene00760  Nicotinate and nicotinamide metabolism
sene00770  Pantothenate and CoA biosynthesis
sene00780  Biotin metabolism
sene00785  Lipoic acid metabolism
sene00790  Folate biosynthesis
sene00860  Porphyrin metabolism
sene00900  Terpenoid backbone biosynthesis
sene00907  Pinene, camphor and geraniol degradation
sene00910  Nitrogen metabolism
sene00920  Sulfur metabolism
sene00930  Caprolactam degradation
sene00946  Degradation of flavonoids
sene00999  Biosynthesis of various plant secondary metabolites
sene01040  Biosynthesis of unsaturated fatty acids
sene01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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