KEGG   PATHWAY: senj01100
Entry
senj01100                   Pathway                                
Name
Metabolic pathways - Salmonella enterica subsp. enterica serovar Javiana
Class
Pathway map
senj01100  Metabolic pathways
senj01100

Module
senj_M00002  Glycolysis, core module involving three-carbon compounds [PATH:senj01100]
senj_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:senj01100]
senj_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:senj01100]
senj_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:senj01100]
senj_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:senj01100]
senj_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:senj01100]
senj_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:senj01100]
senj_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:senj01100]
senj_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:senj01100]
senj_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:senj01100]
senj_M00012  Glyoxylate cycle [PATH:senj01100]
senj_M00015  Proline biosynthesis, glutamate => proline [PATH:senj01100]
senj_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:senj01100]
senj_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:senj01100]
senj_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:senj01100]
senj_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:senj01100]
senj_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:senj01100]
senj_M00021  Cysteine biosynthesis, serine => cysteine [PATH:senj01100]
senj_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:senj01100]
senj_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:senj01100]
senj_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:senj01100]
senj_M00026  Histidine biosynthesis, PRPP => histidine [PATH:senj01100]
senj_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:senj01100]
senj_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:senj01100]
senj_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:senj01100]
senj_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:senj01100]
senj_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:senj01100]
senj_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:senj01100]
senj_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:senj01100]
senj_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:senj01100]
senj_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:senj01100]
senj_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:senj01100]
senj_M00063  CMP-KDO biosynthesis [PATH:senj01100]
senj_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:senj01100]
senj_M00082  Fatty acid biosynthesis, initiation [PATH:senj01100]
senj_M00083  Fatty acid biosynthesis, elongation [PATH:senj01100]
senj_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:senj01100]
senj_M00087  beta-Oxidation [PATH:senj01100]
senj_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:senj01100]
senj_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:senj01100]
senj_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:senj01100]
senj_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:senj01100]
senj_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:senj01100]
senj_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:senj01100]
senj_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:senj01100]
senj_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:senj01100]
senj_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:senj01100]
senj_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:senj01100]
senj_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:senj01100]
senj_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:senj01100]
senj_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:senj01100]
senj_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:senj01100]
senj_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:senj01100]
senj_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:senj01100]
senj_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:senj01100]
senj_M00149  Succinate dehydrogenase, prokaryotes [PATH:senj01100]
senj_M00150  Fumarate reductase, prokaryotes [PATH:senj01100]
senj_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:senj01100]
senj_M00168  CAM (Crassulacean acid metabolism), dark [PATH:senj01100]
senj_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:senj01100]
senj_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:senj01100]
senj_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:senj01100]
senj_M00417  Cytochrome o ubiquinol oxidase [PATH:senj01100]
senj_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:senj01100]
senj_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:senj01100]
senj_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:senj01100]
senj_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:senj01100]
senj_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:senj01100]
senj_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:senj01100]
senj_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:senj01100]
senj_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:senj01100]
senj_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:senj01100]
senj_M00621  Glycine cleavage system [PATH:senj01100]
senj_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:senj01100]
senj_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:senj01100]
senj_M00793  dTDP-L-rhamnose biosynthesis [PATH:senj01100]
senj_M00844  Arginine biosynthesis, ornithine => arginine [PATH:senj01100]
senj_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:senj01100]
senj_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:senj01100]
senj_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:senj01100]
senj_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:senj01100]
senj_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:senj01100]
senj_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:senj01100]
senj_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:senj01100]
senj_M00924  Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:senj01100]
senj_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:senj01100]
senj_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:senj01100]
senj_M00970  Proline degradation, proline => glutamate [PATH:senj01100]
Organism
Salmonella enterica subsp. enterica serovar Javiana [GN:senj]
Related
pathway
senj00010  Glycolysis / Gluconeogenesis
senj00020  Citrate cycle (TCA cycle)
senj00030  Pentose phosphate pathway
senj00040  Pentose and glucuronate interconversions
senj00051  Fructose and mannose metabolism
senj00052  Galactose metabolism
senj00053  Ascorbate and aldarate metabolism
senj00061  Fatty acid biosynthesis
senj00071  Fatty acid degradation
senj00074  Mycolic acid biosynthesis
senj00130  Ubiquinone and other terpenoid-quinone biosynthesis
senj00190  Oxidative phosphorylation
senj00220  Arginine biosynthesis
senj00230  Purine metabolism
senj00240  Pyrimidine metabolism
senj00250  Alanine, aspartate and glutamate metabolism
senj00260  Glycine, serine and threonine metabolism
senj00261  Monobactam biosynthesis
senj00270  Cysteine and methionine metabolism
senj00280  Valine, leucine and isoleucine degradation
senj00290  Valine, leucine and isoleucine biosynthesis
senj00300  Lysine biosynthesis
senj00310  Lysine degradation
senj00330  Arginine and proline metabolism
senj00332  Carbapenem biosynthesis
senj00340  Histidine metabolism
senj00350  Tyrosine metabolism
senj00360  Phenylalanine metabolism
senj00361  Chlorocyclohexane and chlorobenzene degradation
senj00362  Benzoate degradation
senj00364  Fluorobenzoate degradation
senj00380  Tryptophan metabolism
senj00400  Phenylalanine, tyrosine and tryptophan biosynthesis
senj00401  Novobiocin biosynthesis
senj00410  beta-Alanine metabolism
senj00430  Taurine and hypotaurine metabolism
senj00440  Phosphonate and phosphinate metabolism
senj00450  Selenocompound metabolism
senj00460  Cyanoamino acid metabolism
senj00470  D-Amino acid metabolism
senj00480  Glutathione metabolism
senj00500  Starch and sucrose metabolism
senj00520  Amino sugar and nucleotide sugar metabolism
senj00521  Streptomycin biosynthesis
senj00523  Polyketide sugar unit biosynthesis
senj00525  Acarbose and validamycin biosynthesis
senj00540  Lipopolysaccharide biosynthesis
senj00541  O-Antigen nucleotide sugar biosynthesis
senj00542  O-Antigen repeat unit biosynthesis
senj00543  Exopolysaccharide biosynthesis
senj00550  Peptidoglycan biosynthesis
senj00552  Teichoic acid biosynthesis
senj00561  Glycerolipid metabolism
senj00562  Inositol phosphate metabolism
senj00564  Glycerophospholipid metabolism
senj00565  Ether lipid metabolism
senj00592  alpha-Linolenic acid metabolism
senj00600  Sphingolipid metabolism
senj00620  Pyruvate metabolism
senj00623  Toluene degradation
senj00625  Chloroalkane and chloroalkene degradation
senj00626  Naphthalene degradation
senj00627  Aminobenzoate degradation
senj00630  Glyoxylate and dicarboxylate metabolism
senj00633  Nitrotoluene degradation
senj00640  Propanoate metabolism
senj00643  Styrene degradation
senj00650  Butanoate metabolism
senj00660  C5-Branched dibasic acid metabolism
senj00670  One carbon pool by folate
senj00680  Methane metabolism
senj00710  Carbon fixation by Calvin cycle
senj00720  Other carbon fixation pathways
senj00730  Thiamine metabolism
senj00740  Riboflavin metabolism
senj00750  Vitamin B6 metabolism
senj00760  Nicotinate and nicotinamide metabolism
senj00770  Pantothenate and CoA biosynthesis
senj00780  Biotin metabolism
senj00785  Lipoic acid metabolism
senj00790  Folate biosynthesis
senj00860  Porphyrin metabolism
senj00900  Terpenoid backbone biosynthesis
senj00907  Pinene, camphor and geraniol degradation
senj00910  Nitrogen metabolism
senj00920  Sulfur metabolism
senj00930  Caprolactam degradation
senj00946  Degradation of flavonoids
senj00999  Biosynthesis of various plant secondary metabolites
senj01040  Biosynthesis of unsaturated fatty acids
senj01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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