KEGG   PATHWAY: serq01100
Entry
serq01100         Global    Pathway                                
Name
Metabolic pathways - Prodigiosinella confusarubida ATCC 39006
Class
Pathway map
serq01100  Metabolic pathways
serq01100

Module
serq_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:serq01100]
serq_M00002  Glycolysis, core module involving three-carbon compounds [PATH:serq01100]
serq_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:serq01100]
serq_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:serq01100]
serq_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:serq01100]
serq_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:serq01100]
serq_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:serq01100]
serq_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:serq01100]
serq_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:serq01100]
serq_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:serq01100]
serq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:serq01100]
serq_M00012  Glyoxylate cycle [PATH:serq01100]
serq_M00015  Proline biosynthesis, glutamate => proline [PATH:serq01100]
serq_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:serq01100]
serq_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:serq01100]
serq_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:serq01100]
serq_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:serq01100]
serq_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:serq01100]
serq_M00021  Cysteine biosynthesis, serine => cysteine [PATH:serq01100]
serq_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:serq01100]
serq_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:serq01100]
serq_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:serq01100]
serq_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:serq01100]
serq_M00026  Histidine biosynthesis, PRPP => histidine [PATH:serq01100]
serq_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:serq01100]
serq_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:serq01100]
serq_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:serq01100]
serq_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:serq01100]
serq_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:serq01100]
serq_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:serq01100]
serq_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:serq01100]
serq_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:serq01100]
serq_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:serq01100]
serq_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:serq01100]
serq_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:serq01100]
serq_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:serq01100]
serq_M00063  CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO [PATH:serq01100]
serq_M00064  ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep [PATH:serq01100]
serq_M00082  Fatty acid biosynthesis, initiation [PATH:serq01100]
serq_M00083  Fatty acid biosynthesis, elongation [PATH:serq01100]
serq_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:serq01100]
serq_M00087  beta-Oxidation [PATH:serq01100]
serq_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:serq01100]
serq_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:serq01100]
serq_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:serq01100]
serq_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:serq01100]
serq_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:serq01100]
serq_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:serq01100]
serq_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:serq01100]
serq_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:serq01100]
serq_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:serq01100]
serq_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:serq01100]
serq_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:serq01100]
serq_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:serq01100]
serq_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:serq01100]
serq_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:serq01100]
serq_M00149  Succinate dehydrogenase, prokaryotes [PATH:serq01100]
serq_M00150  Fumarate reductase, prokaryotes [PATH:serq01100]
serq_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:serq01100]
serq_M00168  CAM (Crassulacean acid metabolism), dark [PATH:serq01100]
serq_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:serq01100]
serq_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:serq01100]
serq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:serq01100]
serq_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:serq01100]
serq_M00417  Cytochrome o ubiquinol oxidase [PATH:serq01100]
serq_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:serq01100]
serq_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:serq01100]
serq_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:serq01100]
serq_M00549  UDP-Glc biosynthesis, Glc => UDP-Glc [PATH:serq01100]
serq_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:serq01100]
serq_M00554  UDP-Gal biosynthesis, Gal => UDP-Gal [PATH:serq01100]
serq_M00555  Betaine biosynthesis, choline => betaine [PATH:serq01100]
serq_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:serq01100]
serq_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:serq01100]
serq_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:serq01100]
serq_M00621  Glycine cleavage system [PATH:serq01100]
serq_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:serq01100]
serq_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:serq01100]
serq_M00675  Carbapenem-3-carboxylate biosynthesis, pyrroline-5-carboxylate + malonyl-CoA => carbapenem-3-carboxylate [PATH:serq01100]
serq_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:serq01100]
serq_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha [PATH:serq01100]
serq_M00844  Arginine biosynthesis, ornithine => arginine [PATH:serq01100]
serq_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:serq01100]
serq_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:serq01100]
serq_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:serq01100]
serq_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:serq01100]
serq_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:serq01100]
serq_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:serq01100]
serq_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:serq01100]
serq_M00909  UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc [PATH:serq01100]
serq_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:serq01100]
serq_M00970  Proline degradation, proline => glutamate [PATH:serq01100]
serq_M00988  PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine [PATH:serq01100]
serq_M00989  Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:serq01100]
Organism
Prodigiosinella confusarubida ATCC 39006 [GN:serq]
Related
pathway
serq00010  Glycolysis / Gluconeogenesis
serq00020  Citrate cycle (TCA cycle)
serq00030  Pentose phosphate pathway
serq00040  Pentose and glucuronate interconversions
serq00051  Fructose and mannose metabolism
serq00052  Galactose metabolism
serq00053  Ascorbate and aldarate metabolism
serq00061  Fatty acid biosynthesis
serq00071  Fatty acid degradation
serq00074  Mycolic acid biosynthesis
serq00130  Ubiquinone and other terpenoid-quinone biosynthesis
serq00190  Oxidative phosphorylation
serq00220  Arginine biosynthesis
serq00230  Purine metabolism
serq00240  Pyrimidine metabolism
serq00250  Alanine, aspartate and glutamate metabolism
serq00260  Glycine, serine and threonine metabolism
serq00261  Monobactam biosynthesis
serq00270  Cysteine and methionine metabolism
serq00280  Valine, leucine and isoleucine degradation
serq00290  Valine, leucine and isoleucine biosynthesis
serq00300  Lysine biosynthesis
serq00310  Lysine degradation
serq00330  Arginine and proline metabolism
serq00332  Carbapenem biosynthesis
serq00333  Prodigiosin biosynthesis
serq00340  Histidine metabolism
serq00350  Tyrosine metabolism
serq00360  Phenylalanine metabolism
serq00361  Chlorocyclohexane and chlorobenzene degradation
serq00362  Benzoate degradation
serq00364  Fluorobenzoate degradation
serq00380  Tryptophan metabolism
serq00400  Phenylalanine, tyrosine and tryptophan biosynthesis
serq00401  Novobiocin biosynthesis
serq00410  beta-Alanine metabolism
serq00430  Taurine and hypotaurine metabolism
serq00440  Phosphonate and phosphinate metabolism
serq00450  Selenocompound metabolism
serq00460  Cyanoamino acid metabolism
serq00470  D-Amino acid metabolism
serq00480  Glutathione metabolism
serq00500  Starch and sucrose metabolism
serq00511  Other glycan degradation
serq00520  Amino sugar and nucleotide sugar metabolism
serq00521  Streptomycin biosynthesis
serq00523  Polyketide sugar unit biosynthesis
serq00525  Acarbose and validamycin biosynthesis
serq00540  Lipopolysaccharide biosynthesis
serq00541  Biosynthesis of various nucleotide sugars
serq00542  O-Antigen repeat unit biosynthesis
serq00543  Exopolysaccharide biosynthesis
serq00550  Peptidoglycan biosynthesis
serq00552  Teichoic acid biosynthesis
serq00561  Glycerolipid metabolism
serq00562  Inositol phosphate metabolism
serq00564  Glycerophospholipid metabolism
serq00565  Ether lipid metabolism
serq00592  alpha-Linolenic acid metabolism
serq00600  Sphingolipid metabolism
serq00620  Pyruvate metabolism
serq00621  Dioxin degradation
serq00622  Xylene degradation
serq00623  Toluene degradation
serq00625  Chloroalkane and chloroalkene degradation
serq00626  Naphthalene degradation
serq00627  Aminobenzoate degradation
serq00630  Glyoxylate and dicarboxylate metabolism
serq00633  Nitrotoluene degradation
serq00640  Propanoate metabolism
serq00643  Styrene degradation
serq00650  Butanoate metabolism
serq00660  C5-Branched dibasic acid metabolism
serq00670  One carbon pool by folate
serq00680  Methane metabolism
serq00710  Carbon fixation by Calvin cycle
serq00720  Other carbon fixation pathways
serq00730  Thiamine metabolism
serq00740  Riboflavin metabolism
serq00750  Vitamin B6 metabolism
serq00760  Nicotinate and nicotinamide metabolism
serq00770  Pantothenate and CoA biosynthesis
serq00780  Biotin metabolism
serq00785  Lipoic acid metabolism
serq00790  Folate biosynthesis
serq00791  Atrazine degradation
serq00860  Porphyrin metabolism
serq00900  Terpenoid backbone biosynthesis
serq00907  Pinene, camphor and geraniol degradation
serq00910  Nitrogen metabolism
serq00920  Sulfur metabolism
serq00930  Caprolactam degradation
serq00946  Degradation of flavonoids
serq00984  Steroid degradation
serq00998  Biosynthesis of various antibiotics
serq00999  Biosynthesis of various plant secondary metabolites
serq01040  Biosynthesis of unsaturated fatty acids
serq01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   

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