KEGG   PATHWAY: sfn01100
Entry
sfn01100                    Pathway                                
Name
Metabolic pathways - Shigella flexneri 2003036
Class
Pathway map
sfn01100  Metabolic pathways
sfn01100

Module
sfn_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sfn01100]
sfn_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sfn01100]
sfn_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sfn01100]
sfn_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sfn01100]
sfn_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sfn01100]
sfn_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sfn01100]
sfn_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sfn01100]
sfn_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sfn01100]
sfn_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:sfn01100]
sfn_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sfn01100]
sfn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sfn01100]
sfn_M00012  Glyoxylate cycle [PATH:sfn01100]
sfn_M00015  Proline biosynthesis, glutamate => proline [PATH:sfn01100]
sfn_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sfn01100]
sfn_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sfn01100]
sfn_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sfn01100]
sfn_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sfn01100]
sfn_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:sfn01100]
sfn_M00021  Cysteine biosynthesis, serine => cysteine [PATH:sfn01100]
sfn_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sfn01100]
sfn_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:sfn01100]
sfn_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sfn01100]
sfn_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:sfn01100]
sfn_M00026  Histidine biosynthesis, PRPP => histidine [PATH:sfn01100]
sfn_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:sfn01100]
sfn_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:sfn01100]
sfn_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sfn01100]
sfn_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sfn01100]
sfn_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sfn01100]
sfn_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:sfn01100]
sfn_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sfn01100]
sfn_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sfn01100]
sfn_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:sfn01100]
sfn_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sfn01100]
sfn_M00063  CMP-KDO biosynthesis [PATH:sfn01100]
sfn_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:sfn01100]
sfn_M00082  Fatty acid biosynthesis, initiation [PATH:sfn01100]
sfn_M00083  Fatty acid biosynthesis, elongation [PATH:sfn01100]
sfn_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:sfn01100]
sfn_M00087  beta-Oxidation [PATH:sfn01100]
sfn_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sfn01100]
sfn_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:sfn01100]
sfn_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sfn01100]
sfn_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sfn01100]
sfn_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sfn01100]
sfn_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:sfn01100]
sfn_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:sfn01100]
sfn_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:sfn01100]
sfn_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:sfn01100]
sfn_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sfn01100]
sfn_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:sfn01100]
sfn_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sfn01100]
sfn_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:sfn01100]
sfn_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:sfn01100]
sfn_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:sfn01100]
sfn_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:sfn01100]
sfn_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:sfn01100]
sfn_M00149  Succinate dehydrogenase, prokaryotes [PATH:sfn01100]
sfn_M00150  Fumarate reductase, prokaryotes [PATH:sfn01100]
sfn_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:sfn01100]
sfn_M00168  CAM (Crassulacean acid metabolism), dark [PATH:sfn01100]
sfn_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:sfn01100]
sfn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sfn01100]
sfn_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:sfn01100]
sfn_M00417  Cytochrome o ubiquinol oxidase [PATH:sfn01100]
sfn_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sfn01100]
sfn_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:sfn01100]
sfn_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:sfn01100]
sfn_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sfn01100]
sfn_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:sfn01100]
sfn_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:sfn01100]
sfn_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sfn01100]
sfn_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sfn01100]
sfn_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:sfn01100]
sfn_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sfn01100]
sfn_M00621  Glycine cleavage system [PATH:sfn01100]
sfn_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:sfn01100]
sfn_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sfn01100]
sfn_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sfn01100]
sfn_M00793  dTDP-L-rhamnose biosynthesis [PATH:sfn01100]
sfn_M00844  Arginine biosynthesis, ornithine => arginine [PATH:sfn01100]
sfn_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:sfn01100]
sfn_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sfn01100]
sfn_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:sfn01100]
sfn_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:sfn01100]
sfn_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sfn01100]
sfn_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sfn01100]
sfn_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:sfn01100]
sfn_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sfn01100]
sfn_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:sfn01100]
sfn_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sfn01100]
sfn_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:sfn01100]
sfn_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:sfn01100]
sfn_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:sfn01100]
Organism
Shigella flexneri 2003036 [GN:sfn]
Related
pathway
sfn00010  Glycolysis / Gluconeogenesis
sfn00020  Citrate cycle (TCA cycle)
sfn00030  Pentose phosphate pathway
sfn00040  Pentose and glucuronate interconversions
sfn00051  Fructose and mannose metabolism
sfn00052  Galactose metabolism
sfn00053  Ascorbate and aldarate metabolism
sfn00061  Fatty acid biosynthesis
sfn00071  Fatty acid degradation
sfn00121  Secondary bile acid biosynthesis
sfn00130  Ubiquinone and other terpenoid-quinone biosynthesis
sfn00190  Oxidative phosphorylation
sfn00220  Arginine biosynthesis
sfn00230  Purine metabolism
sfn00240  Pyrimidine metabolism
sfn00250  Alanine, aspartate and glutamate metabolism
sfn00260  Glycine, serine and threonine metabolism
sfn00261  Monobactam biosynthesis
sfn00270  Cysteine and methionine metabolism
sfn00280  Valine, leucine and isoleucine degradation
sfn00290  Valine, leucine and isoleucine biosynthesis
sfn00300  Lysine biosynthesis
sfn00310  Lysine degradation
sfn00330  Arginine and proline metabolism
sfn00332  Carbapenem biosynthesis
sfn00340  Histidine metabolism
sfn00350  Tyrosine metabolism
sfn00360  Phenylalanine metabolism
sfn00361  Chlorocyclohexane and chlorobenzene degradation
sfn00362  Benzoate degradation
sfn00364  Fluorobenzoate degradation
sfn00380  Tryptophan metabolism
sfn00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sfn00401  Novobiocin biosynthesis
sfn00410  beta-Alanine metabolism
sfn00430  Taurine and hypotaurine metabolism
sfn00450  Selenocompound metabolism
sfn00460  Cyanoamino acid metabolism
sfn00470  D-Amino acid metabolism
sfn00480  Glutathione metabolism
sfn00500  Starch and sucrose metabolism
sfn00511  Other glycan degradation
sfn00520  Amino sugar and nucleotide sugar metabolism
sfn00521  Streptomycin biosynthesis
sfn00523  Polyketide sugar unit biosynthesis
sfn00525  Acarbose and validamycin biosynthesis
sfn00540  Lipopolysaccharide biosynthesis
sfn00541  O-Antigen nucleotide sugar biosynthesis
sfn00542  O-Antigen repeat unit biosynthesis
sfn00543  Exopolysaccharide biosynthesis
sfn00550  Peptidoglycan biosynthesis
sfn00552  Teichoic acid biosynthesis
sfn00561  Glycerolipid metabolism
sfn00562  Inositol phosphate metabolism
sfn00564  Glycerophospholipid metabolism
sfn00565  Ether lipid metabolism
sfn00592  alpha-Linolenic acid metabolism
sfn00600  Sphingolipid metabolism
sfn00620  Pyruvate metabolism
sfn00623  Toluene degradation
sfn00625  Chloroalkane and chloroalkene degradation
sfn00626  Naphthalene degradation
sfn00627  Aminobenzoate degradation
sfn00630  Glyoxylate and dicarboxylate metabolism
sfn00633  Nitrotoluene degradation
sfn00640  Propanoate metabolism
sfn00650  Butanoate metabolism
sfn00660  C5-Branched dibasic acid metabolism
sfn00670  One carbon pool by folate
sfn00680  Methane metabolism
sfn00730  Thiamine metabolism
sfn00740  Riboflavin metabolism
sfn00750  Vitamin B6 metabolism
sfn00760  Nicotinate and nicotinamide metabolism
sfn00770  Pantothenate and CoA biosynthesis
sfn00780  Biotin metabolism
sfn00785  Lipoic acid metabolism
sfn00790  Folate biosynthesis
sfn00860  Porphyrin metabolism
sfn00900  Terpenoid backbone biosynthesis
sfn00907  Pinene, camphor and geraniol degradation
sfn00910  Nitrogen metabolism
sfn00920  Sulfur metabolism
sfn00930  Caprolactam degradation
sfn00946  Degradation of flavonoids
sfn00997  Biosynthesis of various other secondary metabolites
sfn00999  Biosynthesis of various plant secondary metabolites
sfn01040  Biosynthesis of unsaturated fatty acids
sfn01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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