KEGG   PATHWAY: sfr01100
Entry
sfr01100                    Pathway                                
Name
Metabolic pathways - Shewanella frigidimarina
Class
Pathway map
sfr01100  Metabolic pathways
sfr01100

Module
sfr_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sfr01100]
sfr_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sfr01100]
sfr_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sfr01100]
sfr_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sfr01100]
sfr_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sfr01100]
sfr_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sfr01100]
sfr_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sfr01100]
sfr_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:sfr01100]
sfr_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sfr01100]
sfr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sfr01100]
sfr_M00012  Glyoxylate cycle [PATH:sfr01100]
sfr_M00015  Proline biosynthesis, glutamate => proline [PATH:sfr01100]
sfr_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sfr01100]
sfr_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sfr01100]
sfr_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sfr01100]
sfr_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sfr01100]
sfr_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:sfr01100]
sfr_M00021  Cysteine biosynthesis, serine => cysteine [PATH:sfr01100]
sfr_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sfr01100]
sfr_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:sfr01100]
sfr_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sfr01100]
sfr_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:sfr01100]
sfr_M00026  Histidine biosynthesis, PRPP => histidine [PATH:sfr01100]
sfr_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:sfr01100]
sfr_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:sfr01100]
sfr_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:sfr01100]
sfr_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:sfr01100]
sfr_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sfr01100]
sfr_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sfr01100]
sfr_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sfr01100]
sfr_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sfr01100]
sfr_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sfr01100]
sfr_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:sfr01100]
sfr_M00063  CMP-KDO biosynthesis [PATH:sfr01100]
sfr_M00083  Fatty acid biosynthesis, elongation [PATH:sfr01100]
sfr_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:sfr01100]
sfr_M00087  beta-Oxidation [PATH:sfr01100]
sfr_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sfr01100]
sfr_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sfr01100]
sfr_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sfr01100]
sfr_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sfr01100]
sfr_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:sfr01100]
sfr_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:sfr01100]
sfr_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:sfr01100]
sfr_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:sfr01100]
sfr_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sfr01100]
sfr_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:sfr01100]
sfr_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sfr01100]
sfr_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:sfr01100]
sfr_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:sfr01100]
sfr_M00149  Succinate dehydrogenase, prokaryotes [PATH:sfr01100]
sfr_M00151  Cytochrome bc1 complex respiratory unit [PATH:sfr01100]
sfr_M00155  Cytochrome c oxidase, prokaryotes [PATH:sfr01100]
sfr_M00156  Cytochrome c oxidase, cbb3-type [PATH:sfr01100]
sfr_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:sfr01100]
sfr_M00168  CAM (Crassulacean acid metabolism), dark [PATH:sfr01100]
sfr_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:sfr01100]
sfr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sfr01100]
sfr_M00417  Cytochrome o ubiquinol oxidase [PATH:sfr01100]
sfr_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sfr01100]
sfr_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:sfr01100]
sfr_M00555  Betaine biosynthesis, choline => betaine [PATH:sfr01100]
sfr_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sfr01100]
sfr_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sfr01100]
sfr_M00621  Glycine cleavage system [PATH:sfr01100]
sfr_M00793  dTDP-L-rhamnose biosynthesis [PATH:sfr01100]
sfr_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:sfr01100]
sfr_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sfr01100]
sfr_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sfr01100]
sfr_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sfr01100]
sfr_M00970  Proline degradation, proline => glutamate [PATH:sfr01100]
Organism
Shewanella frigidimarina [GN:sfr]
Related
pathway
sfr00010  Glycolysis / Gluconeogenesis
sfr00020  Citrate cycle (TCA cycle)
sfr00030  Pentose phosphate pathway
sfr00040  Pentose and glucuronate interconversions
sfr00051  Fructose and mannose metabolism
sfr00052  Galactose metabolism
sfr00053  Ascorbate and aldarate metabolism
sfr00061  Fatty acid biosynthesis
sfr00071  Fatty acid degradation
sfr00130  Ubiquinone and other terpenoid-quinone biosynthesis
sfr00190  Oxidative phosphorylation
sfr00220  Arginine biosynthesis
sfr00230  Purine metabolism
sfr00240  Pyrimidine metabolism
sfr00250  Alanine, aspartate and glutamate metabolism
sfr00260  Glycine, serine and threonine metabolism
sfr00261  Monobactam biosynthesis
sfr00270  Cysteine and methionine metabolism
sfr00280  Valine, leucine and isoleucine degradation
sfr00290  Valine, leucine and isoleucine biosynthesis
sfr00300  Lysine biosynthesis
sfr00310  Lysine degradation
sfr00330  Arginine and proline metabolism
sfr00332  Carbapenem biosynthesis
sfr00340  Histidine metabolism
sfr00350  Tyrosine metabolism
sfr00360  Phenylalanine metabolism
sfr00361  Chlorocyclohexane and chlorobenzene degradation
sfr00362  Benzoate degradation
sfr00364  Fluorobenzoate degradation
sfr00380  Tryptophan metabolism
sfr00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sfr00401  Novobiocin biosynthesis
sfr00410  beta-Alanine metabolism
sfr00430  Taurine and hypotaurine metabolism
sfr00450  Selenocompound metabolism
sfr00460  Cyanoamino acid metabolism
sfr00470  D-Amino acid metabolism
sfr00480  Glutathione metabolism
sfr00500  Starch and sucrose metabolism
sfr00520  Amino sugar and nucleotide sugar metabolism
sfr00521  Streptomycin biosynthesis
sfr00523  Polyketide sugar unit biosynthesis
sfr00525  Acarbose and validamycin biosynthesis
sfr00540  Lipopolysaccharide biosynthesis
sfr00541  O-Antigen nucleotide sugar biosynthesis
sfr00542  O-Antigen repeat unit biosynthesis
sfr00543  Exopolysaccharide biosynthesis
sfr00550  Peptidoglycan biosynthesis
sfr00552  Teichoic acid biosynthesis
sfr00561  Glycerolipid metabolism
sfr00562  Inositol phosphate metabolism
sfr00564  Glycerophospholipid metabolism
sfr00565  Ether lipid metabolism
sfr00590  Arachidonic acid metabolism
sfr00592  alpha-Linolenic acid metabolism
sfr00620  Pyruvate metabolism
sfr00623  Toluene degradation
sfr00625  Chloroalkane and chloroalkene degradation
sfr00626  Naphthalene degradation
sfr00627  Aminobenzoate degradation
sfr00630  Glyoxylate and dicarboxylate metabolism
sfr00633  Nitrotoluene degradation
sfr00640  Propanoate metabolism
sfr00643  Styrene degradation
sfr00650  Butanoate metabolism
sfr00660  C5-Branched dibasic acid metabolism
sfr00670  One carbon pool by folate
sfr00680  Methane metabolism
sfr00710  Carbon fixation by Calvin cycle
sfr00720  Other carbon fixation pathways
sfr00730  Thiamine metabolism
sfr00740  Riboflavin metabolism
sfr00750  Vitamin B6 metabolism
sfr00760  Nicotinate and nicotinamide metabolism
sfr00770  Pantothenate and CoA biosynthesis
sfr00780  Biotin metabolism
sfr00785  Lipoic acid metabolism
sfr00790  Folate biosynthesis
sfr00860  Porphyrin metabolism
sfr00900  Terpenoid backbone biosynthesis
sfr00907  Pinene, camphor and geraniol degradation
sfr00910  Nitrogen metabolism
sfr00920  Sulfur metabolism
sfr00930  Caprolactam degradation
sfr00946  Degradation of flavonoids
sfr00999  Biosynthesis of various plant secondary metabolites
sfr01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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