KEGG   PATHWAY: shf01100
Entry
shf01100                    Pathway                                
Name
Metabolic pathways - Shewanella sp. FDAARGOS_354
Class
Pathway map
shf01100  Metabolic pathways
shf01100

Module
shf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:shf01100]
shf_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:shf01100]
shf_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:shf01100]
shf_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:shf01100]
shf_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:shf01100]
shf_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:shf01100]
shf_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:shf01100]
shf_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:shf01100]
shf_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:shf01100]
shf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:shf01100]
shf_M00012  Glyoxylate cycle [PATH:shf01100]
shf_M00015  Proline biosynthesis, glutamate => proline [PATH:shf01100]
shf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:shf01100]
shf_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:shf01100]
shf_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:shf01100]
shf_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:shf01100]
shf_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:shf01100]
shf_M00021  Cysteine biosynthesis, serine => cysteine [PATH:shf01100]
shf_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:shf01100]
shf_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:shf01100]
shf_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:shf01100]
shf_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:shf01100]
shf_M00026  Histidine biosynthesis, PRPP => histidine [PATH:shf01100]
shf_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:shf01100]
shf_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:shf01100]
shf_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:shf01100]
shf_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:shf01100]
shf_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:shf01100]
shf_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:shf01100]
shf_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:shf01100]
shf_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:shf01100]
shf_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:shf01100]
shf_M00063  CMP-KDO biosynthesis [PATH:shf01100]
shf_M00083  Fatty acid biosynthesis, elongation [PATH:shf01100]
shf_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:shf01100]
shf_M00087  beta-Oxidation [PATH:shf01100]
shf_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:shf01100]
shf_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:shf01100]
shf_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:shf01100]
shf_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:shf01100]
shf_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:shf01100]
shf_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:shf01100]
shf_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:shf01100]
shf_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:shf01100]
shf_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:shf01100]
shf_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:shf01100]
shf_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:shf01100]
shf_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:shf01100]
shf_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:shf01100]
shf_M00140  C1-unit interconversion, prokaryotes [PATH:shf01100]
shf_M00149  Succinate dehydrogenase, prokaryotes [PATH:shf01100]
shf_M00151  Cytochrome bc1 complex respiratory unit [PATH:shf01100]
shf_M00155  Cytochrome c oxidase, prokaryotes [PATH:shf01100]
shf_M00156  Cytochrome c oxidase, cbb3-type [PATH:shf01100]
shf_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:shf01100]
shf_M00168  CAM (Crassulacean acid metabolism), dark [PATH:shf01100]
shf_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:shf01100]
shf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:shf01100]
shf_M00417  Cytochrome o ubiquinol oxidase [PATH:shf01100]
shf_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:shf01100]
shf_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:shf01100]
shf_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:shf01100]
shf_M00621  Glycine cleavage system [PATH:shf01100]
shf_M00793  dTDP-L-rhamnose biosynthesis [PATH:shf01100]
shf_M00844  Arginine biosynthesis, ornithine => arginine [PATH:shf01100]
shf_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:shf01100]
shf_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:shf01100]
shf_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:shf01100]
shf_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:shf01100]
shf_M00970  Proline degradation, proline => glutamate [PATH:shf01100]
Organism
Shewanella sp. FDAARGOS_354 [GN:shf]
Related
pathway
shf00010  Glycolysis / Gluconeogenesis
shf00020  Citrate cycle (TCA cycle)
shf00030  Pentose phosphate pathway
shf00040  Pentose and glucuronate interconversions
shf00051  Fructose and mannose metabolism
shf00052  Galactose metabolism
shf00053  Ascorbate and aldarate metabolism
shf00061  Fatty acid biosynthesis
shf00071  Fatty acid degradation
shf00074  Mycolic acid biosynthesis
shf00130  Ubiquinone and other terpenoid-quinone biosynthesis
shf00190  Oxidative phosphorylation
shf00220  Arginine biosynthesis
shf00230  Purine metabolism
shf00240  Pyrimidine metabolism
shf00250  Alanine, aspartate and glutamate metabolism
shf00260  Glycine, serine and threonine metabolism
shf00261  Monobactam biosynthesis
shf00270  Cysteine and methionine metabolism
shf00280  Valine, leucine and isoleucine degradation
shf00290  Valine, leucine and isoleucine biosynthesis
shf00300  Lysine biosynthesis
shf00310  Lysine degradation
shf00330  Arginine and proline metabolism
shf00332  Carbapenem biosynthesis
shf00340  Histidine metabolism
shf00350  Tyrosine metabolism
shf00360  Phenylalanine metabolism
shf00361  Chlorocyclohexane and chlorobenzene degradation
shf00362  Benzoate degradation
shf00364  Fluorobenzoate degradation
shf00380  Tryptophan metabolism
shf00400  Phenylalanine, tyrosine and tryptophan biosynthesis
shf00401  Novobiocin biosynthesis
shf00410  beta-Alanine metabolism
shf00430  Taurine and hypotaurine metabolism
shf00450  Selenocompound metabolism
shf00460  Cyanoamino acid metabolism
shf00470  D-Amino acid metabolism
shf00480  Glutathione metabolism
shf00500  Starch and sucrose metabolism
shf00511  Other glycan degradation
shf00520  Amino sugar and nucleotide sugar metabolism
shf00521  Streptomycin biosynthesis
shf00523  Polyketide sugar unit biosynthesis
shf00525  Acarbose and validamycin biosynthesis
shf00540  Lipopolysaccharide biosynthesis
shf00541  O-Antigen nucleotide sugar biosynthesis
shf00543  Exopolysaccharide biosynthesis
shf00550  Peptidoglycan biosynthesis
shf00552  Teichoic acid biosynthesis
shf00561  Glycerolipid metabolism
shf00562  Inositol phosphate metabolism
shf00564  Glycerophospholipid metabolism
shf00565  Ether lipid metabolism
shf00590  Arachidonic acid metabolism
shf00592  alpha-Linolenic acid metabolism
shf00600  Sphingolipid metabolism
shf00620  Pyruvate metabolism
shf00623  Toluene degradation
shf00625  Chloroalkane and chloroalkene degradation
shf00626  Naphthalene degradation
shf00627  Aminobenzoate degradation
shf00630  Glyoxylate and dicarboxylate metabolism
shf00633  Nitrotoluene degradation
shf00640  Propanoate metabolism
shf00643  Styrene degradation
shf00650  Butanoate metabolism
shf00660  C5-Branched dibasic acid metabolism
shf00670  One carbon pool by folate
shf00680  Methane metabolism
shf00710  Carbon fixation by Calvin cycle
shf00720  Other carbon fixation pathways
shf00730  Thiamine metabolism
shf00740  Riboflavin metabolism
shf00750  Vitamin B6 metabolism
shf00760  Nicotinate and nicotinamide metabolism
shf00770  Pantothenate and CoA biosynthesis
shf00780  Biotin metabolism
shf00785  Lipoic acid metabolism
shf00790  Folate biosynthesis
shf00860  Porphyrin metabolism
shf00900  Terpenoid backbone biosynthesis
shf00903  Limonene degradation
shf00907  Pinene, camphor and geraniol degradation
shf00910  Nitrogen metabolism
shf00920  Sulfur metabolism
shf00930  Caprolactam degradation
shf00999  Biosynthesis of various plant secondary metabolites
shf01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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