KEGG   PATHWAY: shl01100
Entry
shl01100                    Pathway                                
Name
Metabolic pathways - Shewanella halifaxensis
Class
Pathway map
shl01100  Metabolic pathways
shl01100

Module
shl_M00002  Glycolysis, core module involving three-carbon compounds [PATH:shl01100]
shl_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:shl01100]
shl_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:shl01100]
shl_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:shl01100]
shl_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:shl01100]
shl_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:shl01100]
shl_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:shl01100]
shl_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:shl01100]
shl_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:shl01100]
shl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:shl01100]
shl_M00012  Glyoxylate cycle [PATH:shl01100]
shl_M00015  Proline biosynthesis, glutamate => proline [PATH:shl01100]
shl_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:shl01100]
shl_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:shl01100]
shl_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:shl01100]
shl_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:shl01100]
shl_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:shl01100]
shl_M00021  Cysteine biosynthesis, serine => cysteine [PATH:shl01100]
shl_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:shl01100]
shl_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:shl01100]
shl_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:shl01100]
shl_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:shl01100]
shl_M00026  Histidine biosynthesis, PRPP => histidine [PATH:shl01100]
shl_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:shl01100]
shl_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:shl01100]
shl_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:shl01100]
shl_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:shl01100]
shl_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:shl01100]
shl_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:shl01100]
shl_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:shl01100]
shl_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:shl01100]
shl_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:shl01100]
shl_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:shl01100]
shl_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:shl01100]
shl_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:shl01100]
shl_M00063  CMP-KDO biosynthesis [PATH:shl01100]
shl_M00083  Fatty acid biosynthesis, elongation [PATH:shl01100]
shl_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:shl01100]
shl_M00087  beta-Oxidation [PATH:shl01100]
shl_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:shl01100]
shl_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:shl01100]
shl_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:shl01100]
shl_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:shl01100]
shl_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:shl01100]
shl_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:shl01100]
shl_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:shl01100]
shl_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:shl01100]
shl_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:shl01100]
shl_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:shl01100]
shl_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:shl01100]
shl_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:shl01100]
shl_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:shl01100]
shl_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:shl01100]
shl_M00140  C1-unit interconversion, prokaryotes [PATH:shl01100]
shl_M00149  Succinate dehydrogenase, prokaryotes [PATH:shl01100]
shl_M00151  Cytochrome bc1 complex respiratory unit [PATH:shl01100]
shl_M00155  Cytochrome c oxidase, prokaryotes [PATH:shl01100]
shl_M00156  Cytochrome c oxidase, cbb3-type [PATH:shl01100]
shl_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:shl01100]
shl_M00168  CAM (Crassulacean acid metabolism), dark [PATH:shl01100]
shl_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:shl01100]
shl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:shl01100]
shl_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:shl01100]
shl_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:shl01100]
shl_M00555  Betaine biosynthesis, choline => betaine [PATH:shl01100]
shl_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:shl01100]
shl_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:shl01100]
shl_M00621  Glycine cleavage system [PATH:shl01100]
shl_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:shl01100]
shl_M00793  dTDP-L-rhamnose biosynthesis [PATH:shl01100]
shl_M00844  Arginine biosynthesis, ornithine => arginine [PATH:shl01100]
shl_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:shl01100]
shl_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:shl01100]
shl_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:shl01100]
shl_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:shl01100]
shl_M00970  Proline degradation, proline => glutamate [PATH:shl01100]
Organism
Shewanella halifaxensis [GN:shl]
Related
pathway
shl00010  Glycolysis / Gluconeogenesis
shl00020  Citrate cycle (TCA cycle)
shl00030  Pentose phosphate pathway
shl00040  Pentose and glucuronate interconversions
shl00051  Fructose and mannose metabolism
shl00052  Galactose metabolism
shl00053  Ascorbate and aldarate metabolism
shl00061  Fatty acid biosynthesis
shl00071  Fatty acid degradation
shl00074  Mycolic acid biosynthesis
shl00121  Secondary bile acid biosynthesis
shl00130  Ubiquinone and other terpenoid-quinone biosynthesis
shl00190  Oxidative phosphorylation
shl00220  Arginine biosynthesis
shl00230  Purine metabolism
shl00240  Pyrimidine metabolism
shl00250  Alanine, aspartate and glutamate metabolism
shl00260  Glycine, serine and threonine metabolism
shl00261  Monobactam biosynthesis
shl00270  Cysteine and methionine metabolism
shl00280  Valine, leucine and isoleucine degradation
shl00290  Valine, leucine and isoleucine biosynthesis
shl00300  Lysine biosynthesis
shl00310  Lysine degradation
shl00330  Arginine and proline metabolism
shl00332  Carbapenem biosynthesis
shl00340  Histidine metabolism
shl00350  Tyrosine metabolism
shl00360  Phenylalanine metabolism
shl00361  Chlorocyclohexane and chlorobenzene degradation
shl00362  Benzoate degradation
shl00364  Fluorobenzoate degradation
shl00380  Tryptophan metabolism
shl00400  Phenylalanine, tyrosine and tryptophan biosynthesis
shl00401  Novobiocin biosynthesis
shl00410  beta-Alanine metabolism
shl00430  Taurine and hypotaurine metabolism
shl00450  Selenocompound metabolism
shl00460  Cyanoamino acid metabolism
shl00470  D-Amino acid metabolism
shl00480  Glutathione metabolism
shl00500  Starch and sucrose metabolism
shl00511  Other glycan degradation
shl00520  Amino sugar and nucleotide sugar metabolism
shl00521  Streptomycin biosynthesis
shl00523  Polyketide sugar unit biosynthesis
shl00525  Acarbose and validamycin biosynthesis
shl00540  Lipopolysaccharide biosynthesis
shl00541  O-Antigen nucleotide sugar biosynthesis
shl00542  O-Antigen repeat unit biosynthesis
shl00543  Exopolysaccharide biosynthesis
shl00550  Peptidoglycan biosynthesis
shl00552  Teichoic acid biosynthesis
shl00561  Glycerolipid metabolism
shl00562  Inositol phosphate metabolism
shl00564  Glycerophospholipid metabolism
shl00565  Ether lipid metabolism
shl00590  Arachidonic acid metabolism
shl00592  alpha-Linolenic acid metabolism
shl00600  Sphingolipid metabolism
shl00620  Pyruvate metabolism
shl00621  Dioxin degradation
shl00622  Xylene degradation
shl00623  Toluene degradation
shl00625  Chloroalkane and chloroalkene degradation
shl00626  Naphthalene degradation
shl00627  Aminobenzoate degradation
shl00630  Glyoxylate and dicarboxylate metabolism
shl00633  Nitrotoluene degradation
shl00640  Propanoate metabolism
shl00643  Styrene degradation
shl00650  Butanoate metabolism
shl00660  C5-Branched dibasic acid metabolism
shl00670  One carbon pool by folate
shl00680  Methane metabolism
shl00710  Carbon fixation by Calvin cycle
shl00720  Other carbon fixation pathways
shl00730  Thiamine metabolism
shl00740  Riboflavin metabolism
shl00750  Vitamin B6 metabolism
shl00760  Nicotinate and nicotinamide metabolism
shl00770  Pantothenate and CoA biosynthesis
shl00780  Biotin metabolism
shl00785  Lipoic acid metabolism
shl00790  Folate biosynthesis
shl00860  Porphyrin metabolism
shl00900  Terpenoid backbone biosynthesis
shl00903  Limonene degradation
shl00907  Pinene, camphor and geraniol degradation
shl00910  Nitrogen metabolism
shl00920  Sulfur metabolism
shl00930  Caprolactam degradation
shl00946  Degradation of flavonoids
shl00984  Steroid degradation
shl00999  Biosynthesis of various plant secondary metabolites
shl01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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