KEGG   PATHWAY: shq01100
Entry
shq01100                    Pathway                                
Name
Metabolic pathways - Shigella sp. PAMC 28760
Class
Pathway map
shq01100  Metabolic pathways
shq01100

Module
shq_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:shq01100]
shq_M00002  Glycolysis, core module involving three-carbon compounds [PATH:shq01100]
shq_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:shq01100]
shq_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:shq01100]
shq_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:shq01100]
shq_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:shq01100]
shq_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:shq01100]
shq_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:shq01100]
shq_M00012  Glyoxylate cycle [PATH:shq01100]
shq_M00015  Proline biosynthesis, glutamate => proline [PATH:shq01100]
shq_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:shq01100]
shq_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:shq01100]
shq_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:shq01100]
shq_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:shq01100]
shq_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:shq01100]
shq_M00021  Cysteine biosynthesis, serine => cysteine [PATH:shq01100]
shq_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:shq01100]
shq_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:shq01100]
shq_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:shq01100]
shq_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:shq01100]
shq_M00026  Histidine biosynthesis, PRPP => histidine [PATH:shq01100]
shq_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:shq01100]
shq_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:shq01100]
shq_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:shq01100]
shq_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:shq01100]
shq_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:shq01100]
shq_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:shq01100]
shq_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:shq01100]
shq_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:shq01100]
shq_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:shq01100]
shq_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:shq01100]
shq_M00063  CMP-KDO biosynthesis [PATH:shq01100]
shq_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:shq01100]
shq_M00082  Fatty acid biosynthesis, initiation [PATH:shq01100]
shq_M00083  Fatty acid biosynthesis, elongation [PATH:shq01100]
shq_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:shq01100]
shq_M00087  beta-Oxidation [PATH:shq01100]
shq_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:shq01100]
shq_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:shq01100]
shq_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:shq01100]
shq_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:shq01100]
shq_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:shq01100]
shq_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:shq01100]
shq_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:shq01100]
shq_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:shq01100]
shq_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:shq01100]
shq_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:shq01100]
shq_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:shq01100]
shq_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:shq01100]
shq_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:shq01100]
shq_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:shq01100]
shq_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:shq01100]
shq_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:shq01100]
shq_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:shq01100]
shq_M00149  Succinate dehydrogenase, prokaryotes [PATH:shq01100]
shq_M00150  Fumarate reductase, prokaryotes [PATH:shq01100]
shq_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:shq01100]
shq_M00168  CAM (Crassulacean acid metabolism), dark [PATH:shq01100]
shq_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:shq01100]
shq_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:shq01100]
shq_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:shq01100]
shq_M00417  Cytochrome o ubiquinol oxidase [PATH:shq01100]
shq_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:shq01100]
shq_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:shq01100]
shq_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:shq01100]
shq_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:shq01100]
shq_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:shq01100]
shq_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:shq01100]
shq_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:shq01100]
shq_M00555  Betaine biosynthesis, choline => betaine [PATH:shq01100]
shq_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:shq01100]
shq_M00572  Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:shq01100]
shq_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:shq01100]
shq_M00621  Glycine cleavage system [PATH:shq01100]
shq_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:shq01100]
shq_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:shq01100]
shq_M00793  dTDP-L-rhamnose biosynthesis [PATH:shq01100]
shq_M00844  Arginine biosynthesis, ornithine => arginine [PATH:shq01100]
shq_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:shq01100]
shq_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:shq01100]
shq_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:shq01100]
shq_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:shq01100]
shq_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:shq01100]
shq_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:shq01100]
shq_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:shq01100]
shq_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:shq01100]
shq_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:shq01100]
shq_M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:shq01100]
shq_M00956  Lysine degradation, bacteria, L-lysine => succinate [PATH:shq01100]
shq_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:shq01100]
shq_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:shq01100]
shq_M00970  Proline degradation, proline => glutamate [PATH:shq01100]
Organism
Shigella sp. PAMC 28760 [GN:shq]
Related
pathway
shq00010  Glycolysis / Gluconeogenesis
shq00020  Citrate cycle (TCA cycle)
shq00030  Pentose phosphate pathway
shq00040  Pentose and glucuronate interconversions
shq00051  Fructose and mannose metabolism
shq00052  Galactose metabolism
shq00053  Ascorbate and aldarate metabolism
shq00061  Fatty acid biosynthesis
shq00071  Fatty acid degradation
shq00121  Secondary bile acid biosynthesis
shq00130  Ubiquinone and other terpenoid-quinone biosynthesis
shq00190  Oxidative phosphorylation
shq00220  Arginine biosynthesis
shq00230  Purine metabolism
shq00240  Pyrimidine metabolism
shq00250  Alanine, aspartate and glutamate metabolism
shq00260  Glycine, serine and threonine metabolism
shq00261  Monobactam biosynthesis
shq00270  Cysteine and methionine metabolism
shq00280  Valine, leucine and isoleucine degradation
shq00290  Valine, leucine and isoleucine biosynthesis
shq00300  Lysine biosynthesis
shq00310  Lysine degradation
shq00330  Arginine and proline metabolism
shq00332  Carbapenem biosynthesis
shq00340  Histidine metabolism
shq00350  Tyrosine metabolism
shq00360  Phenylalanine metabolism
shq00361  Chlorocyclohexane and chlorobenzene degradation
shq00362  Benzoate degradation
shq00364  Fluorobenzoate degradation
shq00380  Tryptophan metabolism
shq00400  Phenylalanine, tyrosine and tryptophan biosynthesis
shq00401  Novobiocin biosynthesis
shq00410  beta-Alanine metabolism
shq00430  Taurine and hypotaurine metabolism
shq00440  Phosphonate and phosphinate metabolism
shq00450  Selenocompound metabolism
shq00460  Cyanoamino acid metabolism
shq00470  D-Amino acid metabolism
shq00480  Glutathione metabolism
shq00500  Starch and sucrose metabolism
shq00511  Other glycan degradation
shq00520  Amino sugar and nucleotide sugar metabolism
shq00521  Streptomycin biosynthesis
shq00523  Polyketide sugar unit biosynthesis
shq00525  Acarbose and validamycin biosynthesis
shq00540  Lipopolysaccharide biosynthesis
shq00541  O-Antigen nucleotide sugar biosynthesis
shq00542  O-Antigen repeat unit biosynthesis
shq00543  Exopolysaccharide biosynthesis
shq00550  Peptidoglycan biosynthesis
shq00552  Teichoic acid biosynthesis
shq00561  Glycerolipid metabolism
shq00562  Inositol phosphate metabolism
shq00564  Glycerophospholipid metabolism
shq00565  Ether lipid metabolism
shq00592  alpha-Linolenic acid metabolism
shq00600  Sphingolipid metabolism
shq00620  Pyruvate metabolism
shq00621  Dioxin degradation
shq00622  Xylene degradation
shq00623  Toluene degradation
shq00625  Chloroalkane and chloroalkene degradation
shq00626  Naphthalene degradation
shq00627  Aminobenzoate degradation
shq00630  Glyoxylate and dicarboxylate metabolism
shq00633  Nitrotoluene degradation
shq00640  Propanoate metabolism
shq00643  Styrene degradation
shq00650  Butanoate metabolism
shq00660  C5-Branched dibasic acid metabolism
shq00670  One carbon pool by folate
shq00680  Methane metabolism
shq00730  Thiamine metabolism
shq00740  Riboflavin metabolism
shq00750  Vitamin B6 metabolism
shq00760  Nicotinate and nicotinamide metabolism
shq00770  Pantothenate and CoA biosynthesis
shq00780  Biotin metabolism
shq00785  Lipoic acid metabolism
shq00790  Folate biosynthesis
shq00860  Porphyrin metabolism
shq00900  Terpenoid backbone biosynthesis
shq00907  Pinene, camphor and geraniol degradation
shq00910  Nitrogen metabolism
shq00920  Sulfur metabolism
shq00930  Caprolactam degradation
shq00946  Degradation of flavonoids
shq00999  Biosynthesis of various plant secondary metabolites
shq01040  Biosynthesis of unsaturated fatty acids
shq01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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