KEGG   PATHWAY: shyd01100
Entry
shyd01100                   Pathway                                
Name
Metabolic pathways - Sphingobium xenophagum
Class
Pathway map
shyd01100  Metabolic pathways
shyd01100

Module
shyd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:shyd01100]
shyd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:shyd01100]
shyd_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:shyd01100]
shyd_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:shyd01100]
shyd_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:shyd01100]
shyd_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:shyd01100]
shyd_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:shyd01100]
shyd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:shyd01100]
shyd_M00012  Glyoxylate cycle [PATH:shyd01100]
shyd_M00015  Proline biosynthesis, glutamate => proline [PATH:shyd01100]
shyd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:shyd01100]
shyd_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:shyd01100]
shyd_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:shyd01100]
shyd_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:shyd01100]
shyd_M00021  Cysteine biosynthesis, serine => cysteine [PATH:shyd01100]
shyd_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:shyd01100]
shyd_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:shyd01100]
shyd_M00026  Histidine biosynthesis, PRPP => histidine [PATH:shyd01100]
shyd_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:shyd01100]
shyd_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:shyd01100]
shyd_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:shyd01100]
shyd_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:shyd01100]
shyd_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:shyd01100]
shyd_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:shyd01100]
shyd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:shyd01100]
shyd_M00082  Fatty acid biosynthesis, initiation [PATH:shyd01100]
shyd_M00083  Fatty acid biosynthesis, elongation [PATH:shyd01100]
shyd_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:shyd01100]
shyd_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:shyd01100]
shyd_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:shyd01100]
shyd_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:shyd01100]
shyd_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:shyd01100]
shyd_M00149  Succinate dehydrogenase, prokaryotes [PATH:shyd01100]
shyd_M00151  Cytochrome bc1 complex respiratory unit [PATH:shyd01100]
shyd_M00155  Cytochrome c oxidase, prokaryotes [PATH:shyd01100]
shyd_M00156  Cytochrome c oxidase, cbb3-type [PATH:shyd01100]
shyd_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:shyd01100]
shyd_M00168  CAM (Crassulacean acid metabolism), dark [PATH:shyd01100]
shyd_M00169  CAM (Crassulacean acid metabolism), light [PATH:shyd01100]
shyd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:shyd01100]
shyd_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:shyd01100]
shyd_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:shyd01100]
shyd_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:shyd01100]
shyd_M00569  Catechol meta-cleavage, catechol => acetyl-CoA / 4-methylcatechol => propanoyl-CoA [PATH:shyd01100]
shyd_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:shyd01100]
shyd_M00621  Glycine cleavage system [PATH:shyd01100]
shyd_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:shyd01100]
shyd_M00793  dTDP-L-rhamnose biosynthesis [PATH:shyd01100]
shyd_M00844  Arginine biosynthesis, ornithine => arginine [PATH:shyd01100]
shyd_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:shyd01100]
shyd_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:shyd01100]
shyd_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:shyd01100]
shyd_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:shyd01100]
shyd_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:shyd01100]
Organism
Sphingobium xenophagum [GN:shyd]
Related
pathway
shyd00010  Glycolysis / Gluconeogenesis
shyd00020  Citrate cycle (TCA cycle)
shyd00030  Pentose phosphate pathway
shyd00040  Pentose and glucuronate interconversions
shyd00051  Fructose and mannose metabolism
shyd00052  Galactose metabolism
shyd00053  Ascorbate and aldarate metabolism
shyd00061  Fatty acid biosynthesis
shyd00071  Fatty acid degradation
shyd00074  Mycolic acid biosynthesis
shyd00100  Steroid biosynthesis
shyd00130  Ubiquinone and other terpenoid-quinone biosynthesis
shyd00190  Oxidative phosphorylation
shyd00220  Arginine biosynthesis
shyd00230  Purine metabolism
shyd00240  Pyrimidine metabolism
shyd00250  Alanine, aspartate and glutamate metabolism
shyd00260  Glycine, serine and threonine metabolism
shyd00261  Monobactam biosynthesis
shyd00270  Cysteine and methionine metabolism
shyd00280  Valine, leucine and isoleucine degradation
shyd00290  Valine, leucine and isoleucine biosynthesis
shyd00300  Lysine biosynthesis
shyd00310  Lysine degradation
shyd00330  Arginine and proline metabolism
shyd00332  Carbapenem biosynthesis
shyd00340  Histidine metabolism
shyd00350  Tyrosine metabolism
shyd00360  Phenylalanine metabolism
shyd00361  Chlorocyclohexane and chlorobenzene degradation
shyd00362  Benzoate degradation
shyd00364  Fluorobenzoate degradation
shyd00380  Tryptophan metabolism
shyd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
shyd00401  Novobiocin biosynthesis
shyd00410  beta-Alanine metabolism
shyd00430  Taurine and hypotaurine metabolism
shyd00450  Selenocompound metabolism
shyd00460  Cyanoamino acid metabolism
shyd00470  D-Amino acid metabolism
shyd00480  Glutathione metabolism
shyd00500  Starch and sucrose metabolism
shyd00520  Amino sugar and nucleotide sugar metabolism
shyd00521  Streptomycin biosynthesis
shyd00523  Polyketide sugar unit biosynthesis
shyd00525  Acarbose and validamycin biosynthesis
shyd00540  Lipopolysaccharide biosynthesis
shyd00541  O-Antigen nucleotide sugar biosynthesis
shyd00543  Exopolysaccharide biosynthesis
shyd00550  Peptidoglycan biosynthesis
shyd00552  Teichoic acid biosynthesis
shyd00561  Glycerolipid metabolism
shyd00562  Inositol phosphate metabolism
shyd00564  Glycerophospholipid metabolism
shyd00572  Arabinogalactan biosynthesis - Mycobacterium
shyd00620  Pyruvate metabolism
shyd00621  Dioxin degradation
shyd00622  Xylene degradation
shyd00623  Toluene degradation
shyd00624  Polycyclic aromatic hydrocarbon degradation
shyd00625  Chloroalkane and chloroalkene degradation
shyd00626  Naphthalene degradation
shyd00627  Aminobenzoate degradation
shyd00630  Glyoxylate and dicarboxylate metabolism
shyd00633  Nitrotoluene degradation
shyd00640  Propanoate metabolism
shyd00643  Styrene degradation
shyd00650  Butanoate metabolism
shyd00660  C5-Branched dibasic acid metabolism
shyd00670  One carbon pool by folate
shyd00680  Methane metabolism
shyd00710  Carbon fixation by Calvin cycle
shyd00720  Other carbon fixation pathways
shyd00730  Thiamine metabolism
shyd00740  Riboflavin metabolism
shyd00750  Vitamin B6 metabolism
shyd00760  Nicotinate and nicotinamide metabolism
shyd00770  Pantothenate and CoA biosynthesis
shyd00780  Biotin metabolism
shyd00785  Lipoic acid metabolism
shyd00790  Folate biosynthesis
shyd00860  Porphyrin metabolism
shyd00900  Terpenoid backbone biosynthesis
shyd00903  Limonene degradation
shyd00906  Carotenoid biosynthesis
shyd00907  Pinene, camphor and geraniol degradation
shyd00910  Nitrogen metabolism
shyd00920  Sulfur metabolism
shyd00930  Caprolactam degradation
shyd00946  Degradation of flavonoids
shyd00984  Steroid degradation
shyd00996  Biosynthesis of various alkaloids
shyd00999  Biosynthesis of various plant secondary metabolites
shyd01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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