PATHWAY: shz01100 Help Entry shz01100                    Pathway                                 Name Metabolic pathways - Shinella sp. HZN7 Class BRITE hierarchy Pathway map shz01100   Metabolic pathways Module shz_M00002   Glycolysis, core module involving three-carbon compounds [PATH:shz01100] shz_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:shz01100] shz_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:shz01100] shz_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:shz01100] shz_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:shz01100] shz_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:shz01100] shz_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:shz01100] shz_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:shz01100] shz_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:shz01100] shz_M00012   Glyoxylate cycle [PATH:shz01100] shz_M00015   Proline biosynthesis, glutamate => proline [PATH:shz01100] shz_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:shz01100] shz_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:shz01100] shz_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:shz01100] shz_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:shz01100] shz_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:shz01100] shz_M00021   Cysteine biosynthesis, serine => cysteine [PATH:shz01100] shz_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:shz01100] shz_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:shz01100] shz_M00040   Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:shz01100] shz_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:shz01100] shz_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:shz01100] shz_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:shz01100] shz_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:shz01100] shz_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:shz01100] shz_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:shz01100] shz_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:shz01100] shz_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:shz01100] shz_M00082   Fatty acid biosynthesis, initiation [PATH:shz01100] shz_M00083   Fatty acid biosynthesis, elongation [PATH:shz01100] shz_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:shz01100] shz_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:shz01100] shz_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:shz01100] shz_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:shz01100] shz_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:shz01100] shz_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:shz01100] shz_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:shz01100] shz_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:shz01100] shz_M00140   C1-unit interconversion, prokaryotes [PATH:shz01100] shz_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:shz01100] shz_M00149   Succinate dehydrogenase, prokaryotes [PATH:shz01100] shz_M00151   Cytochrome bc1 complex respiratory unit [PATH:shz01100] shz_M00155   Cytochrome c oxidase, prokaryotes [PATH:shz01100] shz_M00156   Cytochrome c oxidase, cbb3-type [PATH:shz01100] shz_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:shz01100] shz_M00169   CAM (Crassulacean acid metabolism), light [PATH:shz01100] shz_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:shz01100] shz_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:shz01100] shz_M00417   Cytochrome o ubiquinol oxidase [PATH:shz01100] shz_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:shz01100] shz_M00529   Denitrification, nitrate => nitrogen [PATH:shz01100] shz_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:shz01100] shz_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:shz01100] shz_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:shz01100] shz_M00555   Betaine biosynthesis, choline => betaine [PATH:shz01100] shz_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:shz01100] shz_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:shz01100] shz_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:shz01100] shz_M00621   Glycine cleavage system [PATH:shz01100] shz_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:shz01100] shz_M00793   dTDP-L-rhamnose biosynthesis [PATH:shz01100] shz_M00844   Arginine biosynthesis, ornithine => arginine [PATH:shz01100] shz_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:shz01100] shz_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:shz01100] shz_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:shz01100] shz_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:shz01100] shz_M00919   Ectoine degradation, ectoine => aspartate [PATH:shz01100] shz_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:shz01100] shz_M00947   D-Arginine racemization, D-arginine => L-arginine [PATH:shz01100] shz_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:shz01100] shz_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:shz01100] shz_M00970   Proline degradation, proline => glutamate [PATH:shz01100] shz_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:shz01100] Organism Shinella sp. HZN7 [GN:shz] Related pathway shz00010   Glycolysis / Gluconeogenesis shz00020   Citrate cycle (TCA cycle) shz00030   Pentose phosphate pathway shz00040   Pentose and glucuronate interconversions shz00051   Fructose and mannose metabolism shz00052   Galactose metabolism shz00053   Ascorbate and aldarate metabolism shz00061   Fatty acid biosynthesis shz00071   Fatty acid degradation shz00074   Mycolic acid biosynthesis shz00130   Ubiquinone and other terpenoid-quinone biosynthesis shz00190   Oxidative phosphorylation shz00220   Arginine biosynthesis shz00230   Purine metabolism shz00240   Pyrimidine metabolism shz00250   Alanine, aspartate and glutamate metabolism shz00260   Glycine, serine and threonine metabolism shz00261   Monobactam biosynthesis shz00270   Cysteine and methionine metabolism shz00280   Valine, leucine and isoleucine degradation shz00290   Valine, leucine and isoleucine biosynthesis shz00300   Lysine biosynthesis shz00310   Lysine degradation shz00330   Arginine and proline metabolism shz00332   Carbapenem biosynthesis shz00340   Histidine metabolism shz00350   Tyrosine metabolism shz00360   Phenylalanine metabolism shz00361   Chlorocyclohexane and chlorobenzene degradation shz00362   Benzoate degradation shz00364   Fluorobenzoate degradation shz00380   Tryptophan metabolism shz00400   Phenylalanine, tyrosine and tryptophan biosynthesis shz00401   Novobiocin biosynthesis shz00410   beta-Alanine metabolism shz00430   Taurine and hypotaurine metabolism shz00440   Phosphonate and phosphinate metabolism shz00450   Selenocompound metabolism shz00460   Cyanoamino acid metabolism shz00470   D-Amino acid metabolism shz00480   Glutathione metabolism shz00500   Starch and sucrose metabolism shz00511   Other glycan degradation shz00520   Amino sugar and nucleotide sugar metabolism shz00521   Streptomycin biosynthesis shz00523   Polyketide sugar unit biosynthesis shz00525   Acarbose and validamycin biosynthesis shz00540   Lipopolysaccharide biosynthesis shz00541   O-Antigen nucleotide sugar biosynthesis shz00543   Exopolysaccharide biosynthesis shz00550   Peptidoglycan biosynthesis shz00552   Teichoic acid biosynthesis shz00561   Glycerolipid metabolism shz00562   Inositol phosphate metabolism shz00564   Glycerophospholipid metabolism shz00565   Ether lipid metabolism shz00592   alpha-Linolenic acid metabolism shz00600   Sphingolipid metabolism shz00620   Pyruvate metabolism shz00621   Dioxin degradation shz00622   Xylene degradation shz00623   Toluene degradation shz00624   Polycyclic aromatic hydrocarbon degradation shz00625   Chloroalkane and chloroalkene degradation shz00626   Naphthalene degradation shz00627   Aminobenzoate degradation shz00630   Glyoxylate and dicarboxylate metabolism shz00633   Nitrotoluene degradation shz00640   Propanoate metabolism shz00642   Ethylbenzene degradation shz00643   Styrene degradation shz00650   Butanoate metabolism shz00660   C5-Branched dibasic acid metabolism shz00670   One carbon pool by folate shz00680   Methane metabolism shz00710   Carbon fixation by Calvin cycle shz00720   Other carbon fixation pathways shz00730   Thiamine metabolism shz00740   Riboflavin metabolism shz00750   Vitamin B6 metabolism shz00760   Nicotinate and nicotinamide metabolism shz00770   Pantothenate and CoA biosynthesis shz00780   Biotin metabolism shz00785   Lipoic acid metabolism shz00790   Folate biosynthesis shz00791   Atrazine degradation shz00860   Porphyrin metabolism shz00900   Terpenoid backbone biosynthesis shz00906   Carotenoid biosynthesis shz00907   Pinene, camphor and geraniol degradation shz00910   Nitrogen metabolism shz00920   Sulfur metabolism shz00930   Caprolactam degradation shz00946   Degradation of flavonoids shz00999   Biosynthesis of various plant secondary metabolites shz01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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