PATHWAY: slq01100 Help Entry slq01100                    Pathway                                 Name Metabolic pathways - Serratia liquefaciens Class BRITE hierarchy Pathway map slq01100   Metabolic pathways Module slq_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:slq01100] slq_M00002   Glycolysis, core module involving three-carbon compounds [PATH:slq01100] slq_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:slq01100] slq_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:slq01100] slq_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:slq01100] slq_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:slq01100] slq_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:slq01100] slq_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:slq01100] slq_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:slq01100] slq_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:slq01100] slq_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:slq01100] slq_M00012   Glyoxylate cycle [PATH:slq01100] slq_M00015   Proline biosynthesis, glutamate => proline [PATH:slq01100] slq_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:slq01100] slq_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:slq01100] slq_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:slq01100] slq_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:slq01100] slq_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:slq01100] slq_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:slq01100] slq_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:slq01100] slq_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:slq01100] slq_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:slq01100] slq_M00026   Histidine biosynthesis, PRPP => histidine [PATH:slq01100] slq_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:slq01100] slq_M00034   Methionine salvage pathway [PATH:slq01100] slq_M00035   Methionine degradation [PATH:slq01100] slq_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:slq01100] slq_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:slq01100] slq_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:slq01100] slq_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:slq01100] slq_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:slq01100] slq_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:slq01100] slq_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:slq01100] slq_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:slq01100] slq_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:slq01100] slq_M00063   CMP-KDO biosynthesis [PATH:slq01100] slq_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:slq01100] slq_M00082   Fatty acid biosynthesis, initiation [PATH:slq01100] slq_M00083   Fatty acid biosynthesis, elongation [PATH:slq01100] slq_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:slq01100] slq_M00087   beta-Oxidation [PATH:slq01100] slq_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:slq01100] slq_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:slq01100] slq_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:slq01100] slq_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:slq01100] slq_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:slq01100] slq_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:slq01100] slq_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:slq01100] slq_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:slq01100] slq_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:slq01100] slq_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:slq01100] slq_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:slq01100] slq_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:slq01100] slq_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:slq01100] slq_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:slq01100] slq_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:slq01100] slq_M00136   GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:slq01100] slq_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:slq01100] slq_M00149   Succinate dehydrogenase, prokaryotes [PATH:slq01100] slq_M00150   Fumarate reductase, prokaryotes [PATH:slq01100] slq_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:slq01100] slq_M00168   CAM (Crassulacean acid metabolism), dark [PATH:slq01100] slq_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:slq01100] slq_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:slq01100] slq_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:slq01100] slq_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:slq01100] slq_M00417   Cytochrome o ubiquinol oxidase [PATH:slq01100] slq_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:slq01100] slq_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:slq01100] slq_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:slq01100] slq_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:slq01100] slq_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:slq01100] slq_M00555   Betaine biosynthesis, choline => betaine [PATH:slq01100] slq_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:slq01100] slq_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:slq01100] slq_M00621   Glycine cleavage system [PATH:slq01100] slq_M00622   Nicotinate degradation, nicotinate => fumarate [PATH:slq01100] slq_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:slq01100] slq_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:slq01100] slq_M00844   Arginine biosynthesis, ornithine => arginine [PATH:slq01100] slq_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:slq01100] slq_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:slq01100] slq_M00878   Phenylacetate degradation, phenylaxetate => acetyl-CoA/succinyl-CoA [PATH:slq01100] slq_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:slq01100] slq_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:slq01100] slq_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:slq01100] slq_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:slq01100] slq_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:slq01100] slq_M00918   Aerobactin biosynthesis, lysine => aerobactin [PATH:slq01100] slq_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:slq01100] slq_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:slq01100] slq_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:slq01100] slq_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:slq01100] slq_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:slq01100] slq_M00970   Proline degradation, proline => glutamate [PATH:slq01100] Organism Serratia liquefaciens [GN:slq] Related pathway slq00010   Glycolysis / Gluconeogenesis slq00020   Citrate cycle (TCA cycle) slq00030   Pentose phosphate pathway slq00040   Pentose and glucuronate interconversions slq00051   Fructose and mannose metabolism slq00052   Galactose metabolism slq00053   Ascorbate and aldarate metabolism slq00061   Fatty acid biosynthesis slq00071   Fatty acid degradation slq00074   Mycolic acid biosynthesis slq00130   Ubiquinone and other terpenoid-quinone biosynthesis slq00190   Oxidative phosphorylation slq00220   Arginine biosynthesis slq00230   Purine metabolism slq00240   Pyrimidine metabolism slq00250   Alanine, aspartate and glutamate metabolism slq00260   Glycine, serine and threonine metabolism slq00261   Monobactam biosynthesis slq00270   Cysteine and methionine metabolism slq00280   Valine, leucine and isoleucine degradation slq00290   Valine, leucine and isoleucine biosynthesis slq00300   Lysine biosynthesis slq00310   Lysine degradation slq00330   Arginine and proline metabolism slq00332   Carbapenem biosynthesis slq00340   Histidine metabolism slq00350   Tyrosine metabolism slq00360   Phenylalanine metabolism slq00361   Chlorocyclohexane and chlorobenzene degradation slq00362   Benzoate degradation slq00364   Fluorobenzoate degradation slq00380   Tryptophan metabolism slq00400   Phenylalanine, tyrosine and tryptophan biosynthesis slq00401   Novobiocin biosynthesis slq00410   beta-Alanine metabolism slq00430   Taurine and hypotaurine metabolism slq00440   Phosphonate and phosphinate metabolism slq00450   Selenocompound metabolism slq00460   Cyanoamino acid metabolism slq00470   D-Amino acid metabolism slq00480   Glutathione metabolism slq00500   Starch and sucrose metabolism slq00511   Other glycan degradation slq00520   Amino sugar and nucleotide sugar metabolism slq00521   Streptomycin biosynthesis slq00523   Polyketide sugar unit biosynthesis slq00525   Acarbose and validamycin biosynthesis slq00540   Lipopolysaccharide biosynthesis slq00541   O-Antigen nucleotide sugar biosynthesis slq00542   O-Antigen repeat unit biosynthesis slq00543   Exopolysaccharide biosynthesis slq00550   Peptidoglycan biosynthesis slq00552   Teichoic acid biosynthesis slq00561   Glycerolipid metabolism slq00562   Inositol phosphate metabolism slq00564   Glycerophospholipid metabolism slq00565   Ether lipid metabolism slq00591   Linoleic acid metabolism slq00592   alpha-Linolenic acid metabolism slq00600   Sphingolipid metabolism slq00620   Pyruvate metabolism slq00621   Dioxin degradation slq00622   Xylene degradation slq00623   Toluene degradation slq00625   Chloroalkane and chloroalkene degradation slq00626   Naphthalene degradation slq00627   Aminobenzoate degradation slq00630   Glyoxylate and dicarboxylate metabolism slq00633   Nitrotoluene degradation slq00640   Propanoate metabolism slq00643   Styrene degradation slq00650   Butanoate metabolism slq00660   C5-Branched dibasic acid metabolism slq00670   One carbon pool by folate slq00680   Methane metabolism slq00710   Carbon fixation by Calvin cycle slq00720   Other carbon fixation pathways slq00730   Thiamine metabolism slq00740   Riboflavin metabolism slq00750   Vitamin B6 metabolism slq00760   Nicotinate and nicotinamide metabolism slq00770   Pantothenate and CoA biosynthesis slq00780   Biotin metabolism slq00785   Lipoic acid metabolism slq00790   Folate biosynthesis slq00791   Atrazine degradation slq00860   Porphyrin metabolism slq00900   Terpenoid backbone biosynthesis slq00907   Pinene, camphor and geraniol degradation slq00910   Nitrogen metabolism slq00920   Sulfur metabolism slq00930   Caprolactam degradation slq00946   Degradation of flavonoids slq00997   Biosynthesis of various other secondary metabolites slq00999   Biosynthesis of various plant secondary metabolites slq01040   Biosynthesis of unsaturated fatty acids slq01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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