KEGG   PATHWAY: smar01100
Entry
smar01100                   Pathway                                
Name
Metabolic pathways - Serratia marcescens SM39
Class
Pathway map
smar01100  Metabolic pathways
smar01100

Module
smar_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:smar01100]
smar_M00002  Glycolysis, core module involving three-carbon compounds [PATH:smar01100]
smar_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:smar01100]
smar_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:smar01100]
smar_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:smar01100]
smar_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:smar01100]
smar_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:smar01100]
smar_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:smar01100]
smar_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:smar01100]
smar_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:smar01100]
smar_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:smar01100]
smar_M00012  Glyoxylate cycle [PATH:smar01100]
smar_M00015  Proline biosynthesis, glutamate => proline [PATH:smar01100]
smar_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:smar01100]
smar_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:smar01100]
smar_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:smar01100]
smar_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:smar01100]
smar_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:smar01100]
smar_M00021  Cysteine biosynthesis, serine => cysteine [PATH:smar01100]
smar_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:smar01100]
smar_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:smar01100]
smar_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:smar01100]
smar_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:smar01100]
smar_M00026  Histidine biosynthesis, PRPP => histidine [PATH:smar01100]
smar_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:smar01100]
smar_M00034  Methionine salvage pathway [PATH:smar01100]
smar_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:smar01100]
smar_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:smar01100]
smar_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:smar01100]
smar_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:smar01100]
smar_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:smar01100]
smar_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:smar01100]
smar_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:smar01100]
smar_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:smar01100]
smar_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:smar01100]
smar_M00063  CMP-KDO biosynthesis [PATH:smar01100]
smar_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:smar01100]
smar_M00082  Fatty acid biosynthesis, initiation [PATH:smar01100]
smar_M00083  Fatty acid biosynthesis, elongation [PATH:smar01100]
smar_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:smar01100]
smar_M00087  beta-Oxidation [PATH:smar01100]
smar_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:smar01100]
smar_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:smar01100]
smar_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:smar01100]
smar_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:smar01100]
smar_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:smar01100]
smar_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:smar01100]
smar_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:smar01100]
smar_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:smar01100]
smar_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:smar01100]
smar_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:smar01100]
smar_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:smar01100]
smar_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:smar01100]
smar_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:smar01100]
smar_M00136  GABA biosynthesis, prokaryotes, putrescine => GABA [PATH:smar01100]
smar_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:smar01100]
smar_M00149  Succinate dehydrogenase, prokaryotes [PATH:smar01100]
smar_M00150  Fumarate reductase, prokaryotes [PATH:smar01100]
smar_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:smar01100]
smar_M00168  CAM (Crassulacean acid metabolism), dark [PATH:smar01100]
smar_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:smar01100]
smar_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smar01100]
smar_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:smar01100]
smar_M00417  Cytochrome o ubiquinol oxidase [PATH:smar01100]
smar_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:smar01100]
smar_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:smar01100]
smar_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:smar01100]
smar_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:smar01100]
smar_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:smar01100]
smar_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:smar01100]
smar_M00555  Betaine biosynthesis, choline => betaine [PATH:smar01100]
smar_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:smar01100]
smar_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:smar01100]
smar_M00621  Glycine cleavage system [PATH:smar01100]
smar_M00622  Nicotinate degradation, nicotinate => fumarate [PATH:smar01100]
smar_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:smar01100]
smar_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:smar01100]
smar_M00844  Arginine biosynthesis, ornithine => arginine [PATH:smar01100]
smar_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:smar01100]
smar_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:smar01100]
smar_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:smar01100]
smar_M00878  Phenylacetate degradation, phenylaxetate => acetyl-CoA/succinyl-CoA [PATH:smar01100]
smar_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:smar01100]
smar_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:smar01100]
smar_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:smar01100]
smar_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:smar01100]
smar_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:smar01100]
smar_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:smar01100]
smar_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:smar01100]
smar_M00970  Proline degradation, proline => glutamate [PATH:smar01100]
Organism
Serratia marcescens SM39 [GN:smar]
Related
pathway
smar00010  Glycolysis / Gluconeogenesis
smar00020  Citrate cycle (TCA cycle)
smar00030  Pentose phosphate pathway
smar00040  Pentose and glucuronate interconversions
smar00051  Fructose and mannose metabolism
smar00052  Galactose metabolism
smar00053  Ascorbate and aldarate metabolism
smar00061  Fatty acid biosynthesis
smar00071  Fatty acid degradation
smar00074  Mycolic acid biosynthesis
smar00130  Ubiquinone and other terpenoid-quinone biosynthesis
smar00190  Oxidative phosphorylation
smar00220  Arginine biosynthesis
smar00230  Purine metabolism
smar00240  Pyrimidine metabolism
smar00250  Alanine, aspartate and glutamate metabolism
smar00260  Glycine, serine and threonine metabolism
smar00261  Monobactam biosynthesis
smar00270  Cysteine and methionine metabolism
smar00280  Valine, leucine and isoleucine degradation
smar00290  Valine, leucine and isoleucine biosynthesis
smar00300  Lysine biosynthesis
smar00310  Lysine degradation
smar00330  Arginine and proline metabolism
smar00332  Carbapenem biosynthesis
smar00340  Histidine metabolism
smar00350  Tyrosine metabolism
smar00360  Phenylalanine metabolism
smar00361  Chlorocyclohexane and chlorobenzene degradation
smar00362  Benzoate degradation
smar00364  Fluorobenzoate degradation
smar00380  Tryptophan metabolism
smar00400  Phenylalanine, tyrosine and tryptophan biosynthesis
smar00401  Novobiocin biosynthesis
smar00410  beta-Alanine metabolism
smar00430  Taurine and hypotaurine metabolism
smar00440  Phosphonate and phosphinate metabolism
smar00450  Selenocompound metabolism
smar00460  Cyanoamino acid metabolism
smar00470  D-Amino acid metabolism
smar00480  Glutathione metabolism
smar00500  Starch and sucrose metabolism
smar00511  Other glycan degradation
smar00520  Amino sugar and nucleotide sugar metabolism
smar00521  Streptomycin biosynthesis
smar00523  Polyketide sugar unit biosynthesis
smar00525  Acarbose and validamycin biosynthesis
smar00540  Lipopolysaccharide biosynthesis
smar00541  O-Antigen nucleotide sugar biosynthesis
smar00542  O-Antigen repeat unit biosynthesis
smar00543  Exopolysaccharide biosynthesis
smar00550  Peptidoglycan biosynthesis
smar00552  Teichoic acid biosynthesis
smar00561  Glycerolipid metabolism
smar00562  Inositol phosphate metabolism
smar00564  Glycerophospholipid metabolism
smar00565  Ether lipid metabolism
smar00591  Linoleic acid metabolism
smar00592  alpha-Linolenic acid metabolism
smar00600  Sphingolipid metabolism
smar00620  Pyruvate metabolism
smar00622  Xylene degradation
smar00623  Toluene degradation
smar00625  Chloroalkane and chloroalkene degradation
smar00626  Naphthalene degradation
smar00627  Aminobenzoate degradation
smar00630  Glyoxylate and dicarboxylate metabolism
smar00633  Nitrotoluene degradation
smar00640  Propanoate metabolism
smar00643  Styrene degradation
smar00650  Butanoate metabolism
smar00660  C5-Branched dibasic acid metabolism
smar00670  One carbon pool by folate
smar00680  Methane metabolism
smar00710  Carbon fixation by Calvin cycle
smar00720  Other carbon fixation pathways
smar00730  Thiamine metabolism
smar00740  Riboflavin metabolism
smar00750  Vitamin B6 metabolism
smar00760  Nicotinate and nicotinamide metabolism
smar00770  Pantothenate and CoA biosynthesis
smar00780  Biotin metabolism
smar00785  Lipoic acid metabolism
smar00790  Folate biosynthesis
smar00791  Atrazine degradation
smar00860  Porphyrin metabolism
smar00900  Terpenoid backbone biosynthesis
smar00907  Pinene, camphor and geraniol degradation
smar00910  Nitrogen metabolism
smar00920  Sulfur metabolism
smar00930  Caprolactam degradation
smar00946  Degradation of flavonoids
smar00997  Biosynthesis of various other secondary metabolites
smar00999  Biosynthesis of various plant secondary metabolites
smar01040  Biosynthesis of unsaturated fatty acids
smar01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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