KEGG   PATHWAY: smay01100
Entry
smay01100         Global    Pathway                                
Name
Metabolic pathways - Shewanella mangrovisoli
Class
Pathway map
smay01100  Metabolic pathways
smay01100

Module
smay_M00002  Glycolysis, core module involving three-carbon compounds [PATH:smay01100]
smay_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:smay01100]
smay_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:smay01100]
smay_M00005  PRPP biosynthesis, ribose-5P => PRPP [PATH:smay01100]
smay_M00006  Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P [PATH:smay01100]
smay_M00007  Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P [PATH:smay01100]
smay_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:smay01100]
smay_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:smay01100]
smay_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:smay01100]
smay_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:smay01100]
smay_M00012  Glyoxylate cycle [PATH:smay01100]
smay_M00015  Proline biosynthesis, glutamate => proline [PATH:smay01100]
smay_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:smay01100]
smay_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:smay01100]
smay_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:smay01100]
smay_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:smay01100]
smay_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:smay01100]
smay_M00021  Cysteine biosynthesis, serine => cysteine [PATH:smay01100]
smay_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:smay01100]
smay_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:smay01100]
smay_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:smay01100]
smay_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:smay01100]
smay_M00026  Histidine biosynthesis, PRPP => histidine [PATH:smay01100]
smay_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:smay01100]
smay_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:smay01100]
smay_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:smay01100]
smay_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:smay01100]
smay_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:smay01100]
smay_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:smay01100]
smay_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:smay01100]
smay_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:smay01100]
smay_M00063  CMP-KDO biosynthesis, ribulose-5P => CMP-KDO [PATH:smay01100]
smay_M00083  Fatty acid biosynthesis, elongation [PATH:smay01100]
smay_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:smay01100]
smay_M00087  beta-Oxidation [PATH:smay01100]
smay_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:smay01100]
smay_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:smay01100]
smay_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:smay01100]
smay_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:smay01100]
smay_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:smay01100]
smay_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:smay01100]
smay_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:smay01100]
smay_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:smay01100]
smay_M00124  Pyridoxal phosphate biosynthesis, erythrose-4P => pyridoxal-P [PATH:smay01100]
smay_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:smay01100]
smay_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:smay01100]
smay_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:smay01100]
smay_M00140  C1-unit interconversion, prokaryotes [PATH:smay01100]
smay_M00149  Succinate dehydrogenase, prokaryotes [PATH:smay01100]
smay_M00151  Cytochrome bc1 complex respiratory unit [PATH:smay01100]
smay_M00153  Cytochrome bd ubiquinol oxidase [PATH:smay01100]
smay_M00155  Cytochrome c oxidase, prokaryotes [PATH:smay01100]
smay_M00156  Cytochrome c oxidase, cbb3-type [PATH:smay01100]
smay_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:smay01100]
smay_M00168  CAM (Crassulacean acid metabolism), dark [PATH:smay01100]
smay_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:smay01100]
smay_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smay01100]
smay_M00417  Cytochrome o ubiquinol oxidase [PATH:smay01100]
smay_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:smay01100]
smay_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:smay01100]
smay_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:smay01100]
smay_M00621  Glycine cleavage system [PATH:smay01100]
smay_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha [PATH:smay01100]
smay_M00844  Arginine biosynthesis, ornithine => arginine [PATH:smay01100]
smay_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:smay01100]
smay_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:smay01100]
smay_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:smay01100]
smay_M00909  UDP-GlcNAc biosynthesis, prokaryotes, Fru-6P => UDP-GlcNAc [PATH:smay01100]
smay_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:smay01100]
smay_M00970  Proline degradation, proline => glutamate [PATH:smay01100]
smay_M00982  Methylcitrate cycle [PATH:smay01100]
smay_M00989  Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:smay01100]
smay_M00995  UDP-MurNAc biosynthesis, Fru-6P => UDP-MurNAc [PATH:smay01100]
smay_M00996  UDP-MurNAc biosynthesis, anhMurNAc => UDP-MurNAc [PATH:smay01100]
smay_M00999  UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA [PATH:smay01100]
smay_M01055  Putrebactin biosynthesis, putrescine => putrebactin [PATH:smay01100]
Organism
Shewanella mangrovisoli [GN:smay]
Related
pathway
smay00010  Glycolysis / Gluconeogenesis
smay00020  Citrate cycle (TCA cycle)
smay00030  Pentose phosphate pathway
smay00040  Pentose and glucuronate interconversions
smay00051  Fructose and mannose metabolism
smay00052  Galactose metabolism
smay00053  Ascorbate and aldarate metabolism
smay00061  Fatty acid biosynthesis
smay00071  Fatty acid degradation
smay00074  Mycolic acid biosynthesis
smay00130  Ubiquinone and other terpenoid-quinone biosynthesis
smay00190  Oxidative phosphorylation
smay00220  Arginine biosynthesis
smay00230  Purine metabolism
smay00240  Pyrimidine metabolism
smay00250  Alanine, aspartate and glutamate metabolism
smay00260  Glycine, serine and threonine metabolism
smay00261  Monobactam biosynthesis
smay00270  Cysteine and methionine metabolism
smay00280  Valine, leucine and isoleucine degradation
smay00290  Valine, leucine and isoleucine biosynthesis
smay00300  Lysine biosynthesis
smay00310  Lysine degradation
smay00330  Arginine and proline metabolism
smay00332  Carbapenem biosynthesis
smay00340  Histidine metabolism
smay00350  Tyrosine metabolism
smay00360  Phenylalanine metabolism
smay00361  Chlorocyclohexane and chlorobenzene degradation
smay00362  Benzoate degradation
smay00364  Fluorobenzoate degradation
smay00380  Tryptophan metabolism
smay00400  Phenylalanine, tyrosine and tryptophan biosynthesis
smay00401  Novobiocin biosynthesis
smay00410  beta-Alanine metabolism
smay00430  Taurine and hypotaurine metabolism
smay00450  Selenocompound metabolism
smay00460  Cyanoamino acid metabolism
smay00470  D-Amino acid metabolism
smay00480  Glutathione metabolism
smay00500  Starch and sucrose metabolism
smay00511  Other glycan degradation
smay00520  Amino sugar and nucleotide sugar metabolism
smay00521  Streptomycin biosynthesis
smay00523  Polyketide sugar unit biosynthesis
smay00525  Acarbose and validamycin biosynthesis
smay00540  Lipopolysaccharide biosynthesis
smay00541  Biosynthesis of various nucleotide sugars
smay00543  Exopolysaccharide biosynthesis
smay00550  Peptidoglycan biosynthesis
smay00552  Teichoic acid biosynthesis
smay00561  Glycerolipid metabolism
smay00562  Inositol phosphate metabolism
smay00564  Glycerophospholipid metabolism
smay00565  Ether lipid metabolism
smay00590  Arachidonic acid metabolism
smay00592  alpha-Linolenic acid metabolism
smay00600  Sphingolipid metabolism
smay00620  Pyruvate metabolism
smay00623  Toluene degradation
smay00625  Chloroalkane and chloroalkene degradation
smay00626  Naphthalene degradation
smay00627  Aminobenzoate degradation
smay00630  Glyoxylate and dicarboxylate metabolism
smay00633  Nitrotoluene degradation
smay00640  Propanoate metabolism
smay00643  Styrene degradation
smay00650  Butanoate metabolism
smay00660  C5-Branched dibasic acid metabolism
smay00670  One carbon pool by folate
smay00680  Methane metabolism
smay00710  Carbon fixation by Calvin cycle
smay00720  Other carbon fixation pathways
smay00730  Thiamine metabolism
smay00740  Riboflavin metabolism
smay00750  Vitamin B6 metabolism
smay00760  Nicotinate and nicotinamide metabolism
smay00770  Pantothenate and CoA biosynthesis
smay00780  Biotin metabolism
smay00785  Lipoic acid metabolism
smay00790  Folate biosynthesis
smay00860  Porphyrin metabolism
smay00900  Terpenoid backbone biosynthesis
smay00907  Pinene, camphor and geraniol degradation
smay00910  Nitrogen metabolism
smay00920  Sulfur metabolism
smay00930  Caprolactam degradation
smay00975  Biosynthesis of various siderophores
smay00984  Steroid degradation
smay00999  Biosynthesis of various plant secondary metabolites
smay01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   

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